RNA–Protein interactions for RNA: ENST00000634451.2

LINC00339-206, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 687 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-206ENST00000634451 PITX3O75364 302 aa8.93□□□□□ -0.98
LINC00339-206ENST00000634451 AKAIN1P0CW23 69 aa8.93□□□□□ -0.98
LINC00339-206ENST00000634451 GALR1P47211 349 aa8.93□□□□□ -0.98
LINC00339-206ENST00000634451 ALDH3B2P48448 385 aa8.93□□□□□ -0.98
LINC00339-206ENST00000634451 SPCS2Q15005 226 aa8.93□□□□□ -0.98
LINC00339-206ENST00000634451 OR1B1Q8NGR6 318 aa8.93□□□□□ -0.98
LINC00339-206ENST00000634451 AP3S1Q92572 193 aa8.93□□□□□ -0.98
LINC00339-206ENST00000634451 A0A0J9YY99 117 aa8.92□□□□□ -0.98
LINC00339-206ENST00000634451 H3BP45 60 aa8.92□□□□□ -0.98
LINC00339-206ENST00000634451 BOLA2-SMG1P6H3BVE0 249 aa8.92□□□□□ -0.98
LINC00339-206ENST00000634451 ATP5G1P05496 136 aa8.92□□□□□ -0.98
LINC00339-206ENST00000634451 SNRPCP09234 159 aaKnown RBP8.92□□□□□ -0.98
LINC00339-206ENST00000634451 HOXA5P20719 270 aa8.92□□□□□ -0.98
LINC00339-206ENST00000634451 ATP5G3P48201 142 aa8.92□□□□□ -0.98
LINC00339-206ENST00000634451 CCL18P55774 89 aa8.92□□□□□ -0.98
LINC00339-206ENST00000634451 HIST1H1AQ02539 215 aaPredicted RBP8.92□□□□□ -0.98
LINC00339-206ENST00000634451 ZNF738Q8NE65 137 aa8.92□□□□□ -0.98
LINC00339-206ENST00000634451 LINC01587Q99440 93 aa8.92□□□□□ -0.98
LINC00339-206ENST00000634451 Q9H8V8 135 aa8.92□□□□□ -0.98
LINC00339-206ENST00000634451 NOP10Q9NPE3 64 aaKnown RBP8.92□□□□□ -0.98
LINC00339-206ENST00000634451 PFDN2Q9UHV9 154 aa8.92□□□□□ -0.98
LINC00339-206ENST00000634451 TRAV26-1A0A087WT03 109 aa8.91□□□□□ -0.98
LINC00339-206ENST00000634451 ANKRD20A5PA0PJZ0 165 aa8.91□□□□□ -0.98
LINC00339-206ENST00000634451 H3BRN7 92 aa8.91□□□□□ -0.98
LINC00339-206ENST00000634451 TSPOP30536 169 aa8.91□□□□□ -0.98
LINC00339-206ENST00000634451 MEOX2P50222 304 aa8.91□□□□□ -0.98
LINC00339-206ENST00000634451 PRRT1Q99946 306 aa8.91□□□□□ -0.98
LINC00339-206ENST00000634451 MCUBQ9NWR8 336 aa8.91□□□□□ -0.98
LINC00339-206ENST00000634451 CBY3A6NI87 242 aa8.9□□□□□ -0.98
LINC00339-206ENST00000634451 CCNKO75909 580 aa8.9□□□□□ -0.98
LINC00339-206ENST00000634451 FABP1P07148 127 aa8.9□□□□□ -0.98
LINC00339-206ENST00000634451 CXCL3P19876 107 aa8.9□□□□□ -0.98
LINC00339-206ENST00000634451 RHOBP62745 196 aa8.9□□□□□ -0.98
LINC00339-206ENST00000634451 SSBP1Q04837 148 aaKnown RBP8.9□□□□□ -0.98
LINC00339-206ENST00000634451 OR5I1Q13606 314 aa8.9□□□□□ -0.98
LINC00339-206ENST00000634451 IL18Q14116 193 aa8.9□□□□□ -0.98
LINC00339-206ENST00000634451 CLINT1Q14677 625 aa8.9□□□□□ -0.98
LINC00339-206ENST00000634451 ESRGQ1W209 222 aa8.9□□□□□ -0.98
LINC00339-206ENST00000634451 LCE2DQ5TA82 110 aaPredicted RBP8.9□□□□□ -0.98
LINC00339-206ENST00000634451 ACOT7LQ6ZUV0 252 aa8.9□□□□□ -0.98
LINC00339-206ENST00000634451 RNASE8Q8TDE3 154 aaKnown RBP8.9□□□□□ -0.98
LINC00339-206ENST00000634451 KCNIP3Q9Y2W7 256 aa8.9□□□□□ -0.98
LINC00339-206ENST00000634451 WRBO00258 174 aa8.89□□□□□ -0.99
LINC00339-206ENST00000634451 DUSP14O95147 198 aaKnown RBP8.89□□□□□ -0.99
LINC00339-206ENST00000634451 GPR141Q7Z602 305 aa8.89□□□□□ -0.99
LINC00339-206ENST00000634451 TMED4Q7Z7H5 227 aa8.89□□□□□ -0.99
LINC00339-206ENST00000634451 OR8A1Q8NGG7 326 aa8.89□□□□□ -0.99
LINC00339-206ENST00000634451 TMEM147Q9BVK8 224 aa8.89□□□□□ -0.99
LINC00339-206ENST00000634451 ZNF586Q9NXT0 402 aa8.89□□□□□ -0.99
LINC00339-206ENST00000634451 PRAC2D3DTV9 90 aa8.88□□□□□ -0.99
LINC00339-206ENST00000634451 H3BTX0 84 aa8.88□□□□□ -0.99
LINC00339-206ENST00000634451 TAS2R60P59551 318 aa8.88□□□□□ -0.99
LINC00339-206ENST00000634451 RAB11AP62491 216 aa8.88□□□□□ -0.99
LINC00339-206ENST00000634451 MRPS10P82664 201 aaKnown RBP8.88□□□□□ -0.99
LINC00339-206ENST00000634451 AKR1C1Q04828 323 aa8.88□□□□□ -0.99
LINC00339-206ENST00000634451 SPANXN5Q5MJ07 72 aa8.88□□□□□ -0.99
LINC00339-206ENST00000634451 GGNBP1Q5YKI7 109 aa8.88□□□□□ -0.99
LINC00339-206ENST00000634451 BPIFCQ8NFQ6 507 aa8.88□□□□□ -0.99
LINC00339-206ENST00000634451 C15orf40Q8WUR7 153 aa8.88□□□□□ -0.99
LINC00339-206ENST00000634451 DIRAS2Q96HU8 199 aa8.88□□□□□ -0.99
LINC00339-206ENST00000634451 SHANK2-AS3Q9BTD1 123 aa8.88□□□□□ -0.99
LINC00339-206ENST00000634451 Q9H3A6 140 aa8.88□□□□□ -0.99
LINC00339-206ENST00000634451 TNFRSF18Q9Y5U5 241 aa8.88□□□□□ -0.99
LINC00339-206ENST00000634451 MYCBP2O75592 4640 aa8.87□□□□□ -0.99
LINC00339-206ENST00000634451 GAGE12BA1L429 117 aa8.87□□□□□ -0.99
LINC00339-206ENST00000634451 J3KRW8 73 aa8.87□□□□□ -0.99
LINC00339-206ENST00000634451 ZNF701M0R085 212 aaPredicted RBP8.87□□□□□ -0.99
LINC00339-206ENST00000634451 CTDSPLO15194 276 aa8.87□□□□□ -0.99
LINC00339-206ENST00000634451 MRPS12O15235 138 aaKnown RBP8.87□□□□□ -0.99
LINC00339-206ENST00000634451 GAGE7O76087 117 aa8.87□□□□□ -0.99
LINC00339-206ENST00000634451 GAGE12FP0CL80 117 aa8.87□□□□□ -0.99
LINC00339-206ENST00000634451 GAGE12GP0CL81 117 aa8.87□□□□□ -0.99
LINC00339-206ENST00000634451 GAGE12IP0CL82 117 aa8.87□□□□□ -0.99
LINC00339-206ENST00000634451 SAMD13Q5VXD3 122 aa8.87□□□□□ -0.99
LINC00339-206ENST00000634451 Q6ZRN7 208 aaPredicted RBP8.87□□□□□ -0.99
LINC00339-206ENST00000634451 TMEM144Q7Z5S9 345 aa8.87□□□□□ -0.99
LINC00339-206ENST00000634451 LINC00612Q8N6U2 182 aa8.87□□□□□ -0.99
LINC00339-206ENST00000634451 OR4D5Q8NGN0 318 aa8.87□□□□□ -0.99
LINC00339-206ENST00000634451 GNPNAT1Q96EK6 184 aaPredicted RBP8.87□□□□□ -0.99
LINC00339-206ENST00000634451 C16orf74Q96GX8 76 aa8.87□□□□□ -0.99
LINC00339-206ENST00000634451 SLC45A2Q9UMX9 530 aa8.87□□□□□ -0.99
LINC00339-206ENST00000634451 TIMM8BQ9Y5J9 83 aaPredicted RBP8.87□□□□□ -0.99
LINC00339-206ENST00000634451 LINC00854A0A1B0GVQ3 168 aa8.86□□□□□ -0.99
LINC00339-206ENST00000634451 SMCO3A2RU48 225 aa8.86□□□□□ -0.99
LINC00339-206ENST00000634451 SYNGR2O43760 224 aa8.86□□□□□ -0.99
LINC00339-206ENST00000634451 VAMP1P23763 118 aa8.86□□□□□ -0.99
LINC00339-206ENST00000634451 ATP5IP56385 69 aaPredicted RBP8.86□□□□□ -0.99
LINC00339-206ENST00000634451 LINC00315P59091 139 aa8.86□□□□□ -0.99
LINC00339-206ENST00000634451 PSG3Q16557 428 aa8.86□□□□□ -0.99
LINC00339-206ENST00000634451 PATE2Q6UY27 113 aa8.86□□□□□ -0.99
LINC00339-206ENST00000634451 CYP2G1PQ6ZSU1 146 aa8.86□□□□□ -0.99
LINC00339-206ENST00000634451 RXFP4Q8TDU9 374 aa8.86□□□□□ -0.99
LINC00339-206ENST00000634451 RPUSD4Q96CM3 377 aaKnown RBP8.86□□□□□ -0.99
LINC00339-206ENST00000634451 TMPRSS5Q9H3S3 457 aa8.86□□□□□ -0.99
LINC00339-206ENST00000634451 CACFD1Q9UGQ2 172 aa8.86□□□□□ -0.99
LINC00339-206ENST00000634451 SCP2D1Q9UJQ7 156 aa8.86□□□□□ -0.99
LINC00339-206ENST00000634451 EPM2AB3EWF7 344 aa8.85□□□□□ -0.99
LINC00339-206ENST00000634451 SLC17A3O00476 420 aa8.85□□□□□ -0.99
LINC00339-206ENST00000634451 HOXB5P09067 269 aa8.85□□□□□ -0.99
LINC00339-206ENST00000634451 OR5G3P0C626 314 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms