RNA–Protein interactions for RNA: ENST00000626828.1

UBE3D-208, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5 BASIC

Gene UBE3D, Length 114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-208ENST00000626828 ARV1Q9H2C2 271 aa12.28□□□□□ -0.44
UBE3D-208ENST00000626828 ELOA3CA0A087WX78 387 aaPredicted RBP12.27□□□□□ -0.45
UBE3D-208ENST00000626828 H0YIZ8 118 aa12.27□□□□□ -0.45
UBE3D-208ENST00000626828 SOCS3O14543 225 aa12.27□□□□□ -0.45
UBE3D-208ENST00000626828 CA1P00915 261 aaPredicted RBP12.27□□□□□ -0.45
UBE3D-208ENST00000626828 NHLH2Q02577 135 aa12.27□□□□□ -0.45
UBE3D-208ENST00000626828 CASC10Q5T4H9 136 aa12.27□□□□□ -0.45
UBE3D-208ENST00000626828 CHAC2Q8WUX2 184 aa12.27□□□□□ -0.45
UBE3D-208ENST00000626828 C16orf92Q96LL3 132 aa12.27□□□□□ -0.45
UBE3D-208ENST00000626828 RARRES2Q99969 163 aa12.27□□□□□ -0.45
UBE3D-208ENST00000626828 RNF126Q9BV68 326 aa12.27□□□□□ -0.45
UBE3D-208ENST00000626828 SCRT1Q9BWW7 348 aa12.27□□□□□ -0.45
UBE3D-208ENST00000626828 DNAJC4Q9NNZ3 241 aa12.27□□□□□ -0.45
UBE3D-208ENST00000626828 OR5AC2Q9NZP5 309 aa12.27□□□□□ -0.45
UBE3D-208ENST00000626828 H3BMM0 161 aa12.26□□□□□ -0.45
UBE3D-208ENST00000626828 MPC2O95563 127 aa12.26□□□□□ -0.45
UBE3D-208ENST00000626828 PET100P0DJ07 73 aa12.26□□□□□ -0.45
UBE3D-208ENST00000626828 RPL29P47914 159 aaKnown RBP12.26□□□□□ -0.45
UBE3D-208ENST00000626828 NUTF2P61970 127 aaKnown RBP12.26□□□□□ -0.45
UBE3D-208ENST00000626828 SPATA31B1PQ5VZV4 182 aa12.26□□□□□ -0.45
UBE3D-208ENST00000626828 UHRF2Q96PU4 802 aa12.26□□□□□ -0.45
UBE3D-208ENST00000626828 ALG5Q9Y673 324 aa12.26□□□□□ -0.45
UBE3D-208ENST00000626828 COX7A2P2O60397 106 aa12.25□□□□□ -0.45
UBE3D-208ENST00000626828 MPDU1O75352 247 aa12.25□□□□□ -0.45
UBE3D-208ENST00000626828 ATF4P18848 351 aaPredicted RBP12.25□□□□□ -0.45
UBE3D-208ENST00000626828 EWSR1Q01844 656 aaKnown RBP eCLIP12.25□□□□□ -0.45
UBE3D-208ENST00000626828 BAXQ07812 192 aa12.25□□□□□ -0.45
UBE3D-208ENST00000626828 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.25□□□□□ -0.45
UBE3D-208ENST00000626828 LINC00305Q7Z4B0 112 aa12.25□□□□□ -0.45
UBE3D-208ENST00000626828 OR5C1Q8NGR4 320 aa12.25□□□□□ -0.45
UBE3D-208ENST00000626828 C17orf77Q96MU5 243 aa12.25□□□□□ -0.45
UBE3D-208ENST00000626828 RPRMQ9NS64 109 aa12.25□□□□□ -0.45
UBE3D-208ENST00000626828 GIG44P09565 113 aaPredicted RBP12.24□□□□□ -0.45
UBE3D-208ENST00000626828 HLA-DRB4P13762 266 aa12.24□□□□□ -0.45
UBE3D-208ENST00000626828 PRR20EP86478 221 aa12.24□□□□□ -0.45
UBE3D-208ENST00000626828 PRR20CP86479 221 aa12.24□□□□□ -0.45
UBE3D-208ENST00000626828 PRR20DP86480 221 aa12.24□□□□□ -0.45
UBE3D-208ENST00000626828 PRR20BP86481 221 aa12.24□□□□□ -0.45
UBE3D-208ENST00000626828 PRR20AP86496 221 aa12.24□□□□□ -0.45
UBE3D-208ENST00000626828 C10orf113Q5VZT2 155 aa12.24□□□□□ -0.45
UBE3D-208ENST00000626828 MIC13Q5XKP0 118 aa12.24□□□□□ -0.45
UBE3D-208ENST00000626828 EBLN2Q6P2I7 272 aa12.24□□□□□ -0.45
UBE3D-208ENST00000626828 FOXI2Q6ZQN5 318 aa12.24□□□□□ -0.45
UBE3D-208ENST00000626828 OR1L4Q8NGR5 311 aa12.24□□□□□ -0.45
UBE3D-208ENST00000626828 OR11H2Q8NH07 326 aa12.24□□□□□ -0.45
UBE3D-208ENST00000626828 TMEM37Q8WXS4 190 aa12.24□□□□□ -0.45
UBE3D-208ENST00000626828 SAV1Q9H4B6 383 aaPredicted RBP12.24□□□□□ -0.45
UBE3D-208ENST00000626828 HLA-DRB4X5D2U9 266 aa12.24□□□□□ -0.45
UBE3D-208ENST00000626828 DNAH7Q8WXX0 4024 aa12.23□□□□□ -0.45
UBE3D-208ENST00000626828 A0A0J9YWU9 116 aa12.23□□□□□ -0.45
UBE3D-208ENST00000626828 UBE2L5PA0A1B0GUS4 154 aa12.23□□□□□ -0.45
UBE3D-208ENST00000626828 FGF7P21781 194 aa12.23□□□□□ -0.45
UBE3D-208ENST00000626828 FGL1Q08830 312 aa12.23□□□□□ -0.45
UBE3D-208ENST00000626828 CLUHP3Q96NS8 147 aa12.23□□□□□ -0.45
UBE3D-208ENST00000626828 PFDN5Q99471 154 aa12.23□□□□□ -0.45
UBE3D-208ENST00000626828 C1QTNF4Q9BXJ3 329 aa12.23□□□□□ -0.45
UBE3D-208ENST00000626828 MED28Q9H204 178 aa12.23□□□□□ -0.45
UBE3D-208ENST00000626828 SLC39A9Q9NUM3 307 aa12.23□□□□□ -0.45
UBE3D-208ENST00000626828 B2MP61769 119 aa12.22□□□□□ -0.45
UBE3D-208ENST00000626828 OPCMLQ14982 345 aa12.22□□□□□ -0.45
UBE3D-208ENST00000626828 ZFAND6Q6FIF0 208 aa12.22□□□□□ -0.45
UBE3D-208ENST00000626828 BPIFA4PQ86YQ2 179 aa12.22□□□□□ -0.45
UBE3D-208ENST00000626828 LRRC20Q8TCA0 184 aa12.22□□□□□ -0.45
UBE3D-208ENST00000626828 A0A087X0K7 114 aa12.21□□□□□ -0.45
UBE3D-208ENST00000626828 CXCL3P19876 107 aa12.21□□□□□ -0.45
UBE3D-208ENST00000626828 RPL12P30050 165 aaKnown RBP12.21□□□□□ -0.45
UBE3D-208ENST00000626828 GDF5OSQ5U4N7 250 aa12.21□□□□□ -0.45
UBE3D-208ENST00000626828 PXMP4Q9Y6I8 212 aa12.21□□□□□ -0.45
UBE3D-208ENST00000626828 A0A0J9YX75 114 aa12.2□□□□□ -0.46
UBE3D-208ENST00000626828 MRPS12O15235 138 aaKnown RBP12.2□□□□□ -0.46
UBE3D-208ENST00000626828 DEFB1P60022 68 aa12.2□□□□□ -0.46
UBE3D-208ENST00000626828 CLINT1Q14677 625 aa12.2□□□□□ -0.46
UBE3D-208ENST00000626828 RGS21Q2M5E4 152 aa12.2□□□□□ -0.46
UBE3D-208ENST00000626828 ZNF709Q8N972 641 aa12.2□□□□□ -0.46
UBE3D-208ENST00000626828 CSNK1G2-AS1Q8NCQ2 148 aa12.2□□□□□ -0.46
UBE3D-208ENST00000626828 OR4B1Q8NGF8 309 aa12.2□□□□□ -0.46
UBE3D-208ENST00000626828 THAP6Q8TBB0 222 aa12.2□□□□□ -0.46
UBE3D-208ENST00000626828 C20orf173Q96LM9 149 aa12.2□□□□□ -0.46
UBE3D-208ENST00000626828 NPCDR1Q9BY65 106 aa12.2□□□□□ -0.46
UBE3D-208ENST00000626828 TRAV8-2A0A0B4J237 113 aa12.19□□□□□ -0.46
UBE3D-208ENST00000626828 IGKV3-20P01619 116 aa12.19□□□□□ -0.46
UBE3D-208ENST00000626828 C4BPBP20851 252 aa12.19□□□□□ -0.46
UBE3D-208ENST00000626828 FCN2Q15485 313 aa12.19□□□□□ -0.46
UBE3D-208ENST00000626828 MBD2Q9UBB5 411 aa12.19□□□□□ -0.46
UBE3D-208ENST00000626828 XCL2Q9UBD3 114 aa12.19□□□□□ -0.46
UBE3D-208ENST00000626828 HSPB11Q9Y547 144 aa12.19□□□□□ -0.46
UBE3D-208ENST00000626828 F6UB75 175 aa12.18□□□□□ -0.46
UBE3D-208ENST00000626828 DUSP14O95147 198 aaKnown RBP12.18□□□□□ -0.46
UBE3D-208ENST00000626828 CXCL2P19875 107 aa12.18□□□□□ -0.46
UBE3D-208ENST00000626828 PSG9Q00887 426 aa12.18□□□□□ -0.46
UBE3D-208ENST00000626828 PSG3Q16557 428 aa12.18□□□□□ -0.46
UBE3D-208ENST00000626828 FAM78BQ5VT40 261 aa12.18□□□□□ -0.46
UBE3D-208ENST00000626828 IGFL4Q6B9Z1 124 aa12.18□□□□□ -0.46
UBE3D-208ENST00000626828 LCN15Q6UWW0 184 aa12.18□□□□□ -0.46
UBE3D-208ENST00000626828 ATP5SQ99766 215 aa12.18□□□□□ -0.46
UBE3D-208ENST00000626828 WDR61Q9GZS3 305 aaKnown RBP12.18□□□□□ -0.46
UBE3D-208ENST00000626828 CLEC5AQ9NY25 188 aa12.18□□□□□ -0.46
UBE3D-208ENST00000626828 TRAV5A0A0B4J249 113 aa12.17□□□□□ -0.46
UBE3D-208ENST00000626828 ZNF705EA8MWA4 302 aaPredicted RBP12.17□□□□□ -0.46
UBE3D-208ENST00000626828 C17orf112F2Z3M2 114 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms