RNA–Protein interactions for RNA: ENST00000623985.3

LINC00643-206, long intergenic non-protein coding RNA 643, humanhuman

TSL 1 (best)

Gene LINC00643, Length 864 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-206ENST00000623985 C2orf50Q96LR7 162 aa10.73□□□□□ -0.69
LINC00643-206ENST00000623985 SHANK2-AS3Q9BTD1 123 aa10.73□□□□□ -0.69
LINC00643-206ENST00000623985 RPRMQ9NS64 109 aa10.73□□□□□ -0.69
LINC00643-206ENST00000623985 PTTG2Q9NZH5 202 aa10.73□□□□□ -0.69
LINC00643-206ENST00000623985 XCL2Q9UBD3 114 aa10.73□□□□□ -0.69
LINC00643-206ENST00000623985 LSM5Q9Y4Y9 91 aaKnown RBP10.73□□□□□ -0.69
LINC00643-206ENST00000623985 HYPMO75409 117 aa10.72□□□□□ -0.69
LINC00643-206ENST00000623985 UPK1BO75841 260 aa10.72□□□□□ -0.69
LINC00643-206ENST00000623985 DEFB1P60022 68 aa10.72□□□□□ -0.69
LINC00643-206ENST00000623985 SLC38A11Q08AI6 406 aa10.72□□□□□ -0.69
LINC00643-206ENST00000623985 ARL16Q0P5N6 197 aa10.72□□□□□ -0.69
LINC00643-206ENST00000623985 PXDC1Q5TGL8 231 aa10.72□□□□□ -0.69
LINC00643-206ENST00000623985 EBLN2Q6P2I7 272 aa10.72□□□□□ -0.69
LINC00643-206ENST00000623985 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.72□□□□□ -0.69
LINC00643-206ENST00000623985 RSG1Q9BU20 258 aa10.72□□□□□ -0.69
LINC00643-206ENST00000623985 RNF24Q9Y225 148 aa10.72□□□□□ -0.69
LINC00643-206ENST00000623985 A0A0J9YX75 114 aa10.71□□□□□ -0.69
LINC00643-206ENST00000623985 DEDDO75618 318 aa10.71□□□□□ -0.69
LINC00643-206ENST00000623985 LY6G6CO95867 125 aa10.71□□□□□ -0.69
LINC00643-206ENST00000623985 IGKV3-20P01619 116 aa10.71□□□□□ -0.69
LINC00643-206ENST00000623985 OR5G3P0C626 314 aa10.71□□□□□ -0.69
LINC00643-206ENST00000623985 RPL7P18124 248 aaKnown RBP10.71□□□□□ -0.69
LINC00643-206ENST00000623985 PVALBP20472 110 aaPredicted RBP10.71□□□□□ -0.69
LINC00643-206ENST00000623985 GSG1LQ6UXU4 331 aa10.71□□□□□ -0.69
LINC00643-206ENST00000623985 ZNF709Q8N972 641 aa10.71□□□□□ -0.69
LINC00643-206ENST00000623985 OR4B1Q8NGF8 309 aa10.71□□□□□ -0.69
LINC00643-206ENST00000623985 ENKURQ8TC29 256 aa10.71□□□□□ -0.69
LINC00643-206ENST00000623985 C20orf173Q96LM9 149 aa10.71□□□□□ -0.69
LINC00643-206ENST00000623985 C17orf77Q96MU5 243 aa10.71□□□□□ -0.69
LINC00643-206ENST00000623985 UHRF2Q96PU4 802 aa10.71□□□□□ -0.69
LINC00643-206ENST00000623985 C11orf1Q9H5F2 150 aa10.71□□□□□ -0.69
LINC00643-206ENST00000623985 ELOA3CA0A087WX78 387 aaPredicted RBP10.7□□□□□ -0.7
LINC00643-206ENST00000623985 A8MTW9 85 aa10.7□□□□□ -0.7
LINC00643-206ENST00000623985 C11orf94C9JXX5 98 aa10.7□□□□□ -0.7
LINC00643-206ENST00000623985 AGPAT2O15120 278 aa10.7□□□□□ -0.7
LINC00643-206ENST00000623985 BCAP31P51572 246 aa10.7□□□□□ -0.7
LINC00643-206ENST00000623985 CAV2P51636 162 aa10.7□□□□□ -0.7
LINC00643-206ENST00000623985 ZNF705AQ6ZN79 300 aaPredicted RBP10.7□□□□□ -0.7
LINC00643-206ENST00000623985 NEU1Q99519 415 aa10.7□□□□□ -0.7
LINC00643-206ENST00000623985 ARL6Q9H0F7 186 aa10.7□□□□□ -0.7
LINC00643-206ENST00000623985 ARV1Q9H2C2 271 aa10.7□□□□□ -0.7
LINC00643-206ENST00000623985 EPPK1P58107 5090 aaKnown RBP10.7□□□□□ -0.7
LINC00643-206ENST00000623985 KMT2AQ03164 3969 aa10.7□□□□□ -0.7
LINC00643-206ENST00000623985 A0A087X0K7 114 aa10.69□□□□□ -0.7
LINC00643-206ENST00000623985 ZNF705FA8MVS1 300 aaPredicted RBP10.69□□□□□ -0.7
LINC00643-206ENST00000623985 F6UB75 175 aa10.69□□□□□ -0.7
LINC00643-206ENST00000623985 GOSR2O14653 212 aa10.69□□□□□ -0.7
LINC00643-206ENST00000623985 ZNF705DP0CH99 300 aaPredicted RBP10.69□□□□□ -0.7
LINC00643-206ENST00000623985 ZNF705BP0CI00 300 aaPredicted RBP10.69□□□□□ -0.7
LINC00643-206ENST00000623985 S100A10P60903 97 aa10.69□□□□□ -0.7
LINC00643-206ENST00000623985 PSG9Q00887 426 aa10.69□□□□□ -0.7
LINC00643-206ENST00000623985 FAM78BQ5VT40 261 aa10.69□□□□□ -0.7
LINC00643-206ENST00000623985 C2CD4CQ8TF44 421 aa10.69□□□□□ -0.7
LINC00643-206ENST00000623985 MGST2Q99735 147 aa10.69□□□□□ -0.7
LINC00643-206ENST00000623985 GPN1Q9HCN4 374 aaPredicted RBP10.69□□□□□ -0.7
LINC00643-206ENST00000623985 LYRM2Q9NU23 88 aaPredicted RBP10.69□□□□□ -0.7
LINC00643-206ENST00000623985 TCTAP57738 103 aa10.68□□□□□ -0.7
LINC00643-206ENST00000623985 FXYD7P58549 80 aa10.68□□□□□ -0.7
LINC00643-206ENST00000623985 FGL1Q08830 312 aa10.68□□□□□ -0.7
LINC00643-206ENST00000623985 IL15RAQ13261 267 aa10.68□□□□□ -0.7
LINC00643-206ENST00000623985 PATE2Q6UY27 113 aa10.68□□□□□ -0.7
LINC00643-206ENST00000623985 SLC35B3Q9H1N7 401 aa10.68□□□□□ -0.7
LINC00643-206ENST00000623985 TRAV8-2A0A0B4J237 113 aa10.67□□□□□ -0.7
LINC00643-206ENST00000623985 FAM24AA6NFZ4 105 aa10.67□□□□□ -0.7
LINC00643-206ENST00000623985 SMIM9A6NGZ8 99 aa10.67□□□□□ -0.7
LINC00643-206ENST00000623985 CST7O76096 145 aa10.67□□□□□ -0.7
LINC00643-206ENST00000623985 DUSP14O95147 198 aaKnown RBP10.67□□□□□ -0.7
LINC00643-206ENST00000623985 CXCL2P19875 107 aa10.67□□□□□ -0.7
LINC00643-206ENST00000623985 HLA-DMBP28068 263 aa10.67□□□□□ -0.7
LINC00643-206ENST00000623985 SULT1A1P50225 295 aa10.67□□□□□ -0.7
LINC00643-206ENST00000623985 HBG1P69891 147 aa10.67□□□□□ -0.7
LINC00643-206ENST00000623985 HBG2P69892 147 aa10.67□□□□□ -0.7
LINC00643-206ENST00000623985 RAB31Q13636 194 aa10.67□□□□□ -0.7
LINC00643-206ENST00000623985 RAB32Q13637 225 aa10.67□□□□□ -0.7
LINC00643-206ENST00000623985 VWC2Q2TAL6 325 aa10.67□□□□□ -0.7
LINC00643-206ENST00000623985 Q6ZTC4 211 aa10.67□□□□□ -0.7
LINC00643-206ENST00000623985 LINC00305Q7Z4B0 112 aa10.67□□□□□ -0.7
LINC00643-206ENST00000623985 STX12Q86Y82 276 aa10.67□□□□□ -0.7
LINC00643-206ENST00000623985 UQCC1Q9NVA1 299 aa10.67□□□□□ -0.7
LINC00643-206ENST00000623985 CELA1Q9UNI1 258 aa10.67□□□□□ -0.7
LINC00643-206ENST00000623985 TRAV10A0A0B4J240 114 aa10.66□□□□□ -0.7
LINC00643-206ENST00000623985 TMEM189A5PLL7 270 aa10.66□□□□□ -0.7
LINC00643-206ENST00000623985 MRPS12O15235 138 aaKnown RBP10.66□□□□□ -0.7
LINC00643-206ENST00000623985 COX7A2P2O60397 106 aa10.66□□□□□ -0.7
LINC00643-206ENST00000623985 PRAF2O60831 178 aa10.66□□□□□ -0.7
LINC00643-206ENST00000623985 AMBPP02760 352 aa10.66□□□□□ -0.7
LINC00643-206ENST00000623985 CAMLGP49069 296 aa10.66□□□□□ -0.7
LINC00643-206ENST00000623985 IFITM3Q01628 133 aa10.66□□□□□ -0.7
LINC00643-206ENST00000623985 LGALS9CQ6DKI2 356 aa10.66□□□□□ -0.7
LINC00643-206ENST00000623985 AMTNQ6UX39 209 aa10.66□□□□□ -0.7
LINC00643-206ENST00000623985 NRARPQ7Z6K4 114 aa10.66□□□□□ -0.7
LINC00643-206ENST00000623985 RNF182Q8N6D2 247 aa10.66□□□□□ -0.7
LINC00643-206ENST00000623985 ZNF738Q8NE65 137 aa10.66□□□□□ -0.7
LINC00643-206ENST00000623985 WDR83OSQ9Y284 106 aa10.66□□□□□ -0.7
LINC00643-206ENST00000623985 GOLT1BQ9Y3E0 138 aa10.66□□□□□ -0.7
LINC00643-206ENST00000623985 RFNGQ9Y644 331 aa10.66□□□□□ -0.7
LINC00643-206ENST00000623985 IGHV3OR16-12A0A075B7B8 117 aa10.65□□□□□ -0.7
LINC00643-206ENST00000623985 UBE2L5PA0A1B0GUS4 154 aa10.65□□□□□ -0.7
LINC00643-206ENST00000623985 IGSF23A1L1A6 192 aa10.65□□□□□ -0.7
LINC00643-206ENST00000623985 S100A11P31949 105 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms