RNA–Protein interactions for RNA: ENST00000621266.4

COL4A6-210, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,627 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-210ENST00000621266 Q8TAT8 98 aa8.13□□□□□ -1.11
COL4A6-210ENST00000621266 APOBEC3AP31941 199 aaPredicted RBP8.13□□□□□ -1.11
COL4A6-210ENST00000621266 MORN2Q502X0 79 aa8.13□□□□□ -1.11
COL4A6-210ENST00000621266 Q6ZVH6 145 aa8.13□□□□□ -1.11
COL4A6-210ENST00000621266 PRIMA1Q86XR5 153 aa8.13□□□□□ -1.11
COL4A6-210ENST00000621266 LYZL4Q96KX0 146 aa8.13□□□□□ -1.11
COL4A6-210ENST00000621266 RPUSD1Q9UJJ7 312 aaKnown RBP8.13□□□□□ -1.11
COL4A6-210ENST00000621266 J3QW42 95 aa8.13□□□□□ -1.11
COL4A6-210ENST00000621266 FGF6P10767 208 aa8.13□□□□□ -1.11
COL4A6-210ENST00000621266 C14orf178Q8N769 122 aaPredicted RBP8.13□□□□□ -1.11
COL4A6-210ENST00000621266 CDKN1BP46527 198 aa8.13□□□□□ -1.11
COL4A6-210ENST00000621266 CRYBA4P53673 196 aa8.13□□□□□ -1.11
COL4A6-210ENST00000621266 PRCDQ00LT1 54 aa8.13□□□□□ -1.11
COL4A6-210ENST00000621266 C6orf226Q5I0X4 101 aa8.13□□□□□ -1.11
COL4A6-210ENST00000621266 BVES-AS1Q5T3Y7 98 aa8.13□□□□□ -1.11
COL4A6-210ENST00000621266 SIGLEC15Q6ZMC9 328 aa8.13□□□□□ -1.11
COL4A6-210ENST00000621266 ZNF497Q6ZNH5 498 aa8.13□□□□□ -1.11
COL4A6-210ENST00000621266 Q6ZWC4 215 aa8.13□□□□□ -1.11
COL4A6-210ENST00000621266 PAQR4Q8N4S7 273 aaPredicted RBP8.13□□□□□ -1.11
COL4A6-210ENST00000621266 C15orf53Q8NAA6 179 aa8.13□□□□□ -1.11
COL4A6-210ENST00000621266 SLC25A39Q9BZJ4 359 aaPredicted RBP8.13□□□□□ -1.11
COL4A6-210ENST00000621266 KLHDC3Q9BQ90 382 aa8.12□□□□□ -1.11
COL4A6-210ENST00000621266 INAFM2P0DMQ5 153 aa8.12□□□□□ -1.11
COL4A6-210ENST00000621266 IGFL4Q6B9Z1 124 aa8.12□□□□□ -1.11
COL4A6-210ENST00000621266 Q6ZT83 130 aa8.12□□□□□ -1.11
COL4A6-210ENST00000621266 ZNF837Q96EG3 531 aaPredicted RBP8.12□□□□□ -1.11
COL4A6-210ENST00000621266 UBL5Q9BZL1 73 aa8.12□□□□□ -1.11
COL4A6-210ENST00000621266 TRAV41A0A0B4J266 112 aa8.12□□□□□ -1.11
COL4A6-210ENST00000621266 NBR2O15453 112 aa8.12□□□□□ -1.11
COL4A6-210ENST00000621266 IGHV3-53P01767 116 aa8.12□□□□□ -1.11
COL4A6-210ENST00000621266 SLC25A16P16260 332 aa8.12□□□□□ -1.11
COL4A6-210ENST00000621266 ANKRD29Q8N6D5 301 aa8.12□□□□□ -1.11
COL4A6-210ENST00000621266 SUPT4H1P63272 117 aaKnown RBP8.12□□□□□ -1.11
COL4A6-210ENST00000621266 DEFB121Q5J5C9 76 aa8.12□□□□□ -1.11
COL4A6-210ENST00000621266 C1orf159Q96HA4 380 aa8.12□□□□□ -1.11
COL4A6-210ENST00000621266 RCHY1Q96PM5 261 aa8.12□□□□□ -1.11
COL4A6-210ENST00000621266 VCYO14598 125 aa8.12□□□□□ -1.11
COL4A6-210ENST00000621266 CELA3BP08861 270 aa8.12□□□□□ -1.11
COL4A6-210ENST00000621266 AMTNQ6UX39 209 aa8.12□□□□□ -1.11
COL4A6-210ENST00000621266 CEACAM8P31997 349 aaPredicted RBP8.11□□□□□ -1.11
COL4A6-210ENST00000621266 GVINP1Q7Z2Y8 2422 aa8.11□□□□□ -1.11
COL4A6-210ENST00000621266 IGKV1-9A0A0C4DH69 117 aa8.11□□□□□ -1.11
COL4A6-210ENST00000621266 C9JQL5 133 aa8.11□□□□□ -1.11
COL4A6-210ENST00000621266 C7orf69Q9H7B7 122 aa8.11□□□□□ -1.11
COL4A6-210ENST00000621266 TINCRA0A1B0GVN0 87 aa8.11□□□□□ -1.11
COL4A6-210ENST00000621266 YPEL1O60688 119 aa8.11□□□□□ -1.11
COL4A6-210ENST00000621266 ERCC8Q13216 396 aa8.11□□□□□ -1.11
COL4A6-210ENST00000621266 UTF1Q5T230 341 aa8.11□□□□□ -1.11
COL4A6-210ENST00000621266 MRPL14Q6P1L8 145 aaKnown RBP8.11□□□□□ -1.11
COL4A6-210ENST00000621266 YPEL2Q96QA6 119 aa8.11□□□□□ -1.11
COL4A6-210ENST00000621266 A0A087WWL8 130 aa8.11□□□□□ -1.11
COL4A6-210ENST00000621266 CECR9P0C854 216 aa8.11□□□□□ -1.11
COL4A6-210ENST00000621266 TGFBR3LH3BV60 316 aa8.11□□□□□ -1.11
COL4A6-210ENST00000621266 NDUFC2O95298 119 aa8.11□□□□□ -1.11
COL4A6-210ENST00000621266 IGLL1P15814 213 aa8.11□□□□□ -1.11
COL4A6-210ENST00000621266 Q0VG73 95 aa8.11□□□□□ -1.11
COL4A6-210ENST00000621266 CEND1Q8N111 149 aa8.11□□□□□ -1.11
COL4A6-210ENST00000621266 SVIPQ8NHG7 77 aa8.11□□□□□ -1.11
COL4A6-210ENST00000621266 DUSP14O95147 198 aaKnown RBP8.1□□□□□ -1.11
COL4A6-210ENST00000621266 CARD19Q96LW7 228 aa8.1□□□□□ -1.11
COL4A6-210ENST00000621266 DUTP33316 252 aaKnown RBP8.1□□□□□ -1.11
COL4A6-210ENST00000621266 PSG7Q13046 419 aa8.1□□□□□ -1.11
COL4A6-210ENST00000621266 SP5Q6BEB4 398 aaPredicted RBP8.1□□□□□ -1.11
COL4A6-210ENST00000621266 IQCF6A8MYZ5 107 aa8.1□□□□□ -1.11
COL4A6-210ENST00000621266 CT83Q5H943 113 aa8.1□□□□□ -1.11
COL4A6-210ENST00000621266 LINC00312Q9Y6C7 94 aa8.1□□□□□ -1.11
COL4A6-210ENST00000621266 B9A039 149 aa8.1□□□□□ -1.11
COL4A6-210ENST00000621266 MRPL23Q16540 153 aaKnown RBP8.1□□□□□ -1.11
COL4A6-210ENST00000621266 IGLV3-12A0A075B6K2 115 aa8.1□□□□□ -1.11
COL4A6-210ENST00000621266 OVOL1O14753 267 aa8.1□□□□□ -1.11
COL4A6-210ENST00000621266 C10orf55Q5SWW7 151 aa8.1□□□□□ -1.11
COL4A6-210ENST00000621266 C18orf32Q8TCD1 76 aa8.1□□□□□ -1.11
COL4A6-210ENST00000621266 LINC00479Q96M42 142 aa8.1□□□□□ -1.11
COL4A6-210ENST00000621266 PEMTQ9UBM1 199 aa8.1□□□□□ -1.11
COL4A6-210ENST00000621266 METRNQ9UJH8 293 aa8.1□□□□□ -1.11
COL4A6-210ENST00000621266 J3QKU1 62 aa8.09□□□□□ -1.11
COL4A6-210ENST00000621266 CFHR2P36980 270 aa8.09□□□□□ -1.11
COL4A6-210ENST00000621266 SYNJ2BPP57105 145 aa8.09□□□□□ -1.11
COL4A6-210ENST00000621266 TRAV25A0A0B4J276 109 aa8.09□□□□□ -1.11
COL4A6-210ENST00000621266 PRSS33Q8NF86 280 aa8.09□□□□□ -1.11
COL4A6-210ENST00000621266 CLPSL1A2RUU4 121 aa8.09□□□□□ -1.11
COL4A6-210ENST00000621266 COLCA1Q6ZS62 124 aa8.09□□□□□ -1.11
COL4A6-210ENST00000621266 CACNA1EQ15878 2313 aa8.09□□□□□ -1.11
COL4A6-210ENST00000621266 PTPRFP10586 1907 aa8.09□□□□□ -1.11
COL4A6-210ENST00000621266 CCL25O15444 150 aa8.09□□□□□ -1.11
COL4A6-210ENST00000621266 LINC00271P0C7V0 271 aa8.09□□□□□ -1.11
COL4A6-210ENST00000621266 ZNF329Q86UD4 541 aa8.09□□□□□ -1.11
COL4A6-210ENST00000621266 IGHV2-26A0A0B4J1V2 119 aa8.09□□□□□ -1.11
COL4A6-210ENST00000621266 TRAV3A0A0B4J244 114 aa8.09□□□□□ -1.11
COL4A6-210ENST00000621266 ARMS2P0C7Q2 107 aa8.09□□□□□ -1.11
COL4A6-210ENST00000621266 C9orf106Q8NAJ2 232 aa8.09□□□□□ -1.11
COL4A6-210ENST00000621266 RNASE6Q93091 150 aaKnown RBP8.09□□□□□ -1.11
COL4A6-210ENST00000621266 COX8AP10176 69 aa8.08□□□□□ -1.12
COL4A6-210ENST00000621266 CDPF1Q6NVV7 123 aa8.08□□□□□ -1.12
COL4A6-210ENST00000621266 C5orf24Q7Z6I8 188 aa8.08□□□□□ -1.12
COL4A6-210ENST00000621266 TMEM213A2RRL7 107 aa8.08□□□□□ -1.12
COL4A6-210ENST00000621266 HOXD3P31249 432 aaPredicted RBP8.08□□□□□ -1.12
COL4A6-210ENST00000621266 Q0VFX4 171 aa8.08□□□□□ -1.12
COL4A6-210ENST00000621266 LINC00527Q9UJ94 153 aa8.08□□□□□ -1.12
COL4A6-210ENST00000621266 LY96Q9Y6Y9 160 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 105.8 ms