RNA–Protein interactions for RNA: ENST00000618056.4

PMS1-220, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 1,468 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-220ENST00000618056 SAMD13Q5VXD3 122 aa18.23■□□□□ 0.51
PMS1-220ENST00000618056 SLC25A32Q9H2D1 315 aa18.23■□□□□ 0.51
PMS1-220ENST00000618056 H3BRN7 92 aa18.22■□□□□ 0.51
PMS1-220ENST00000618056 ID1P41134 155 aa18.22■□□□□ 0.51
PMS1-220ENST00000618056 PSMB3P49720 205 aa18.22■□□□□ 0.51
PMS1-220ENST00000618056 SULT1A1P50225 295 aa18.22■□□□□ 0.51
PMS1-220ENST00000618056 MORN3Q6PF18 240 aaPredicted RBP18.22■□□□□ 0.51
PMS1-220ENST00000618056 ZNF546Q86UE3 836 aa18.22■□□□□ 0.51
PMS1-220ENST00000618056 SLC25A39Q9BZJ4 359 aaPredicted RBP18.22■□□□□ 0.51
PMS1-220ENST00000618056 SLC25A22Q9H936 323 aa18.22■□□□□ 0.51
PMS1-220ENST00000618056 DOK5Q9P104 306 aa18.22■□□□□ 0.51
PMS1-220ENST00000618056 HIGD1AQ9Y241 93 aa18.22■□□□□ 0.51
PMS1-220ENST00000618056 AGPAT2O15120 278 aa18.21■□□□□ 0.51
PMS1-220ENST00000618056 MEOX2P50222 304 aa18.21■□□□□ 0.51
PMS1-220ENST00000618056 TMEM41BQ5BJD5 291 aa18.21■□□□□ 0.51
PMS1-220ENST00000618056 PXDC1Q5TGL8 231 aa18.21■□□□□ 0.51
PMS1-220ENST00000618056 TMEM252Q8N6L7 170 aa18.21■□□□□ 0.51
PMS1-220ENST00000618056 PPP1R1CQ8WVI7 109 aa18.21■□□□□ 0.51
PMS1-220ENST00000618056 SHANK2-AS3Q9BTD1 123 aa18.21■□□□□ 0.51
PMS1-220ENST00000618056 IGSF23A1L1A6 192 aa18.2■□□□□ 0.5
PMS1-220ENST00000618056 ISLRO14498 428 aa18.2■□□□□ 0.5
PMS1-220ENST00000618056 ARPC5O15511 151 aa18.2■□□□□ 0.5
PMS1-220ENST00000618056 VWC2Q2TAL6 325 aa18.2■□□□□ 0.5
PMS1-220ENST00000618056 ZFAND6Q6FIF0 208 aa18.2■□□□□ 0.5
PMS1-220ENST00000618056 S100A7AQ86SG5 101 aa18.2■□□□□ 0.5
PMS1-220ENST00000618056 STX12Q86Y82 276 aa18.2■□□□□ 0.5
PMS1-220ENST00000618056 TMEM217Q8N7C4 229 aa18.2■□□□□ 0.5
PMS1-220ENST00000618056 SCRT1Q9BWW7 348 aa18.2■□□□□ 0.5
PMS1-220ENST00000618056 GIG44P09565 113 aaPredicted RBP18.2■□□□□ 0.5
PMS1-220ENST00000618056 CXCL2P19875 107 aa18.2■□□□□ 0.5
PMS1-220ENST00000618056 S100A11P31949 105 aa18.2■□□□□ 0.5
PMS1-220ENST00000618056 LRRC37A5PQ49AS3 106 aa18.2■□□□□ 0.5
PMS1-220ENST00000618056 C17orf77Q96MU5 243 aa18.2■□□□□ 0.5
PMS1-220ENST00000618056 MGST2Q99735 147 aa18.2■□□□□ 0.5
PMS1-220ENST00000618056 ARL6Q9H0F7 186 aa18.2■□□□□ 0.5
PMS1-220ENST00000618056 UQCC1Q9NVA1 299 aa18.2■□□□□ 0.5
PMS1-220ENST00000618056 LYSTQ99698 3801 aa18.19■□□□□ 0.5
PMS1-220ENST00000618056 A0A0J9YWU9 116 aa18.19■□□□□ 0.5
PMS1-220ENST00000618056 OR5G3P0C626 314 aa18.19■□□□□ 0.5
PMS1-220ENST00000618056 HBG1P69891 147 aa18.19■□□□□ 0.5
PMS1-220ENST00000618056 HBG2P69892 147 aa18.19■□□□□ 0.5
PMS1-220ENST00000618056 PATE2Q6UY27 113 aa18.19■□□□□ 0.5
PMS1-220ENST00000618056 ZNF767PQ75MW2 155 aa18.19■□□□□ 0.5
PMS1-220ENST00000618056 THAP6Q8TBB0 222 aa18.19■□□□□ 0.5
PMS1-220ENST00000618056 RSG1Q9BU20 258 aa18.19■□□□□ 0.5
PMS1-220ENST00000618056 WDR83OSQ9Y284 106 aa18.19■□□□□ 0.5
PMS1-220ENST00000618056 DYNC2H1Q8NCM8 4307 aaKnown RBP18.19■□□□□ 0.5
PMS1-220ENST00000618056 H3BMM0 161 aa18.18■□□□□ 0.5
PMS1-220ENST00000618056 HLA-DRB4P13762 266 aa18.18■□□□□ 0.5
PMS1-220ENST00000618056 ATF4P18848 351 aaPredicted RBP18.18■□□□□ 0.5
PMS1-220ENST00000618056 RARRES2Q99969 163 aa18.18■□□□□ 0.5
PMS1-220ENST00000618056 HLA-DRB4X5D2U9 266 aa18.18■□□□□ 0.5
PMS1-220ENST00000618056 RLN2P04090 185 aa18.17■□□□□ 0.5
PMS1-220ENST00000618056 RAB31Q13636 194 aa18.17■□□□□ 0.5
PMS1-220ENST00000618056 OPCMLQ14982 345 aa18.17■□□□□ 0.5
PMS1-220ENST00000618056 LINC00052Q96N35 136 aa18.17■□□□□ 0.5
PMS1-220ENST00000618056 UHRF2Q96PU4 802 aa18.17■□□□□ 0.5
PMS1-220ENST00000618056 RNF24Q9Y225 148 aa18.17■□□□□ 0.5
PMS1-220ENST00000618056 RPL7P18124 248 aaKnown RBP18.16■□□□□ 0.5
PMS1-220ENST00000618056 CAMLGP49069 296 aa18.16■□□□□ 0.5
PMS1-220ENST00000618056 NDUFA5Q16718 116 aa18.16■□□□□ 0.5
PMS1-220ENST00000618056 ATP6V1FQ16864 119 aa18.16■□□□□ 0.5
PMS1-220ENST00000618056 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa18.16■□□□□ 0.5
PMS1-220ENST00000618056 FOXI2Q6ZQN5 318 aa18.16■□□□□ 0.5
PMS1-220ENST00000618056 OR11H2Q8NH07 326 aa18.16■□□□□ 0.5
PMS1-220ENST00000618056 MFFQ9GZY8 342 aa18.16■□□□□ 0.5
PMS1-220ENST00000618056 ARV1Q9H2C2 271 aa18.16■□□□□ 0.5
PMS1-220ENST00000618056 RYR3Q15413 4870 aa18.15■□□□□ 0.5
PMS1-220ENST00000618056 E5RGE8 158 aa18.15■□□□□ 0.5
PMS1-220ENST00000618056 MPC2O95563 127 aa18.15■□□□□ 0.5
PMS1-220ENST00000618056 TMUB2Q71RG4 321 aa18.15■□□□□ 0.5
PMS1-220ENST00000618056 C16orf92Q96LL3 132 aa18.15■□□□□ 0.5
PMS1-220ENST00000618056 SAV1Q9H4B6 383 aaPredicted RBP18.15■□□□□ 0.5
PMS1-220ENST00000618056 MBD2Q9UBB5 411 aa18.15■□□□□ 0.5
PMS1-220ENST00000618056 ATP6V1G1O75348 118 aa18.14■□□□□ 0.5
PMS1-220ENST00000618056 PET100P0DJ07 73 aa18.14■□□□□ 0.5
PMS1-220ENST00000618056 NUTF2P61970 127 aaKnown RBP18.14■□□□□ 0.5
PMS1-220ENST00000618056 CLUHP3Q96NS8 147 aa18.14■□□□□ 0.5
PMS1-220ENST00000618056 TNFSF18Q9UNG2 199 aa18.14■□□□□ 0.5
PMS1-220ENST00000618056 H0YIZ8 118 aa18.14■□□□□ 0.49
PMS1-220ENST00000618056 PRR20EP86478 221 aa18.14■□□□□ 0.49
PMS1-220ENST00000618056 PRR20CP86479 221 aa18.14■□□□□ 0.49
PMS1-220ENST00000618056 PRR20DP86480 221 aa18.14■□□□□ 0.49
PMS1-220ENST00000618056 PRR20BP86481 221 aa18.14■□□□□ 0.49
PMS1-220ENST00000618056 PRR20AP86496 221 aa18.14■□□□□ 0.49
PMS1-220ENST00000618056 GDF5OSQ5U4N7 250 aa18.14■□□□□ 0.49
PMS1-220ENST00000618056 SPATA31B1PQ5VZV4 182 aa18.14■□□□□ 0.49
PMS1-220ENST00000618056 SLC25A31Q9H0C2 315 aa18.14■□□□□ 0.49
PMS1-220ENST00000618056 OR5AC2Q9NZP5 309 aa18.14■□□□□ 0.49
PMS1-220ENST00000618056 ELOA3CA0A087WX78 387 aaPredicted RBP18.13■□□□□ 0.49
PMS1-220ENST00000618056 A0A0D9SG52 128 aa18.13■□□□□ 0.49
PMS1-220ENST00000618056 UBE2L5PA0A1B0GUS4 154 aa18.13■□□□□ 0.49
PMS1-220ENST00000618056 EWSR1Q01844 656 aaKnown RBP eCLIP18.13■□□□□ 0.49
PMS1-220ENST00000618056 ZNF345Q14585 488 aa18.13■□□□□ 0.49
PMS1-220ENST00000618056 CSNK1G2-AS1Q8NCQ2 148 aa18.13■□□□□ 0.49
PMS1-220ENST00000618056 C11orf68Q9H3H3 251 aaKnown RBP18.13■□□□□ 0.49
PMS1-220ENST00000618056 RPRMQ9NS64 109 aa18.13■□□□□ 0.49
PMS1-220ENST00000618056 A0A087X0K7 114 aa18.12■□□□□ 0.49
PMS1-220ENST00000618056 COX7A2P2O60397 106 aa18.12■□□□□ 0.49
PMS1-220ENST00000618056 DEFB1P60022 68 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 154.8 ms