RNA–Protein interactions for RNA: ENST00000616865.4

UBXN1-218, Transcript of UBX domain protein 1, humanhuman

TSL 5 BASIC

Gene UBXN1, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-218ENST00000616865 OR2G3Q8NGZ4 309 aa11.19□□□□□ -0.62
UBXN1-218ENST00000616865 ZNF414Q96IQ9 312 aa11.19□□□□□ -0.62
UBXN1-218ENST00000616865 PSMG3Q9BT73 122 aaPredicted RBP11.19□□□□□ -0.62
UBXN1-218ENST00000616865 RHPN1-AS1Q9BWJ2 59 aa11.19□□□□□ -0.62
UBXN1-218ENST00000616865 ARV1Q9H2C2 271 aa11.19□□□□□ -0.62
UBXN1-218ENST00000616865 SLC25A32Q9H2D1 315 aa11.19□□□□□ -0.62
UBXN1-218ENST00000616865 C19orf73Q9NVV2 129 aa11.19□□□□□ -0.62
UBXN1-218ENST00000616865 RNF24Q9Y225 148 aa11.19□□□□□ -0.62
UBXN1-218ENST00000616865 IGLV1-51P01701 117 aa11.18□□□□□ -0.62
UBXN1-218ENST00000616865 ADAMTSL5Q6ZMM2 481 aa11.18□□□□□ -0.62
UBXN1-218ENST00000616865 SLC51BQ86UW2 128 aa11.18□□□□□ -0.62
UBXN1-218ENST00000616865 SH3BGRL3Q9H299 93 aa11.18□□□□□ -0.62
UBXN1-218ENST00000616865 TECRQ9NZ01 308 aaKnown RBP11.18□□□□□ -0.62
UBXN1-218ENST00000616865 CHEK1O14757 476 aa11.17□□□□□ -0.62
UBXN1-218ENST00000616865 MBP02144 154 aa11.17□□□□□ -0.62
UBXN1-218ENST00000616865 EDN2P20800 178 aa11.17□□□□□ -0.62
UBXN1-218ENST00000616865 RPL11P62913 178 aaKnown RBP11.17□□□□□ -0.62
UBXN1-218ENST00000616865 SERF2P84101 59 aa11.17□□□□□ -0.62
UBXN1-218ENST00000616865 AKR1C8PQ5T2L2 129 aa11.17□□□□□ -0.62
UBXN1-218ENST00000616865 LAMTOR1Q6IAA8 161 aa11.17□□□□□ -0.62
UBXN1-218ENST00000616865 EIF5AL1Q6IS14 154 aaKnown RBP11.17□□□□□ -0.62
UBXN1-218ENST00000616865 IL34Q6ZMJ4 242 aa11.17□□□□□ -0.62
UBXN1-218ENST00000616865 BAP18Q8IXM2 172 aa11.17□□□□□ -0.62
UBXN1-218ENST00000616865 GATAD1Q8WUU5 269 aa11.17□□□□□ -0.62
UBXN1-218ENST00000616865 ST8SIA2Q92186 375 aa11.17□□□□□ -0.62
UBXN1-218ENST00000616865 RNF2Q99496 336 aa11.17□□□□□ -0.62
UBXN1-218ENST00000616865 SLC25A39Q9BZJ4 359 aaPredicted RBP11.17□□□□□ -0.62
UBXN1-218ENST00000616865 SLC25A22Q9H936 323 aa11.17□□□□□ -0.62
UBXN1-218ENST00000616865 SIGLEC8Q9NYZ4 499 aa11.17□□□□□ -0.62
UBXN1-218ENST00000616865 RFNGQ9Y644 331 aa11.17□□□□□ -0.62
UBXN1-218ENST00000616865 PLECQ15149 4684 aaKnown RBP11.16□□□□□ -0.62
UBXN1-218ENST00000616865 A0A1W2PPV4 95 aa11.16□□□□□ -0.62
UBXN1-218ENST00000616865 APOHP02749 345 aaPredicted RBP11.16□□□□□ -0.62
UBXN1-218ENST00000616865 C8orf88P0DMB2 117 aa11.16□□□□□ -0.62
UBXN1-218ENST00000616865 M6PRP20645 277 aa11.16□□□□□ -0.62
UBXN1-218ENST00000616865 RBPMS2Q6ZRY4 209 aaKnown RBP11.16□□□□□ -0.62
UBXN1-218ENST00000616865 LINC00305Q7Z4B0 112 aa11.16□□□□□ -0.62
UBXN1-218ENST00000616865 OR8I2Q8N0Y5 310 aa11.16□□□□□ -0.62
UBXN1-218ENST00000616865 UHRF2Q96PU4 802 aa11.16□□□□□ -0.62
UBXN1-218ENST00000616865 SPATA25Q9BR10 227 aa11.16□□□□□ -0.62
UBXN1-218ENST00000616865 MLXQ9UH92 298 aa11.16□□□□□ -0.62
UBXN1-218ENST00000616865 SELENOKQ9Y6D0 94 aa11.16□□□□□ -0.62
UBXN1-218ENST00000616865 ZNF98A6NK75 572 aa11.15□□□□□ -0.62
UBXN1-218ENST00000616865 H3BRN7 92 aa11.15□□□□□ -0.62
UBXN1-218ENST00000616865 CD5P06127 495 aa11.15□□□□□ -0.62
UBXN1-218ENST00000616865 RHOBP62745 196 aa11.15□□□□□ -0.62
UBXN1-218ENST00000616865 GCSAMLQ5JQS6 135 aa11.15□□□□□ -0.62
UBXN1-218ENST00000616865 C1orf194Q5T5A4 169 aa11.15□□□□□ -0.62
UBXN1-218ENST00000616865 FAM78BQ5VT40 261 aa11.15□□□□□ -0.62
UBXN1-218ENST00000616865 PATE2Q6UY27 113 aa11.15□□□□□ -0.62
UBXN1-218ENST00000616865 TCF24Q7RTU0 167 aa11.15□□□□□ -0.62
UBXN1-218ENST00000616865 OR10G4Q8NGN3 311 aa11.15□□□□□ -0.62
UBXN1-218ENST00000616865 OR10G9Q8NGN4 311 aa11.15□□□□□ -0.62
UBXN1-218ENST00000616865 OR10G7Q8NGN6 311 aa11.15□□□□□ -0.62
UBXN1-218ENST00000616865 STOML3Q8TAV4 291 aa11.15□□□□□ -0.62
UBXN1-218ENST00000616865 SHANK2-AS3Q9BTD1 123 aa11.15□□□□□ -0.62
UBXN1-218ENST00000616865 SCRT1Q9BWW7 348 aa11.15□□□□□ -0.62
UBXN1-218ENST00000616865 VSIRQ9H7M9 311 aa11.15□□□□□ -0.62
UBXN1-218ENST00000616865 U3KQE9 123 aa11.15□□□□□ -0.62
UBXN1-218ENST00000616865 HELTA6NFD8 242 aa11.14□□□□□ -0.63
UBXN1-218ENST00000616865 BUB3O43684 328 aa11.14□□□□□ -0.63
UBXN1-218ENST00000616865 SEC11BP0C7V7 166 aa11.14□□□□□ -0.63
UBXN1-218ENST00000616865 SPP1P10451 314 aa11.14□□□□□ -0.63
UBXN1-218ENST00000616865 GALR1P47211 349 aa11.14□□□□□ -0.63
UBXN1-218ENST00000616865 RAB2AP61019 212 aa11.14□□□□□ -0.63
UBXN1-218ENST00000616865 PAFAH1B2P68402 229 aa11.14□□□□□ -0.63
UBXN1-218ENST00000616865 DEFB114Q30KQ6 69 aa11.14□□□□□ -0.63
UBXN1-218ENST00000616865 TMEM41BQ5BJD5 291 aa11.14□□□□□ -0.63
UBXN1-218ENST00000616865 LEMD1Q68G75 181 aa11.14□□□□□ -0.63
UBXN1-218ENST00000616865 LCN12Q6JVE5 192 aa11.14□□□□□ -0.63
UBXN1-218ENST00000616865 FAM122CQ6P4D5 195 aa11.14□□□□□ -0.63
UBXN1-218ENST00000616865 C16orf54Q6UWD8 224 aa11.14□□□□□ -0.63
UBXN1-218ENST00000616865 OR2K2Q8NGT1 345 aa11.14□□□□□ -0.63
UBXN1-218ENST00000616865 TMEM37Q8WXS4 190 aa11.14□□□□□ -0.63
UBXN1-218ENST00000616865 GPR82Q96P67 336 aa11.14□□□□□ -0.63
UBXN1-218ENST00000616865 MRPL32Q9BYC8 188 aaKnown RBP11.14□□□□□ -0.63
UBXN1-218ENST00000616865 BOLA1Q9Y3E2 137 aa11.14□□□□□ -0.63
UBXN1-218ENST00000616865 IGKV3-7A0A075B6H7 116 aa11.13□□□□□ -0.63
UBXN1-218ENST00000616865 TAS2R45P59539 299 aa11.13□□□□□ -0.63
UBXN1-218ENST00000616865 GUCA2BQ16661 112 aa11.13□□□□□ -0.63
UBXN1-218ENST00000616865 CD300EQ496F6 205 aaPredicted RBP11.13□□□□□ -0.63
UBXN1-218ENST00000616865 SIGLEC15Q6ZMC9 328 aa11.13□□□□□ -0.63
UBXN1-218ENST00000616865 TMED6Q8WW62 240 aa11.13□□□□□ -0.63
UBXN1-218ENST00000616865 ACTR3CQ9C0K3 210 aaPredicted RBP11.13□□□□□ -0.63
UBXN1-218ENST00000616865 FUT9Q9Y231 359 aa11.13□□□□□ -0.63
UBXN1-218ENST00000616865 TRAV25A0A0B4J276 109 aa11.12□□□□□ -0.63
UBXN1-218ENST00000616865 ZNF785A8K8V0 405 aa11.12□□□□□ -0.63
UBXN1-218ENST00000616865 DNASE2O00115 360 aaPredicted RBP11.12□□□□□ -0.63
UBXN1-218ENST00000616865 RPL7P18124 248 aaKnown RBP11.12□□□□□ -0.63
UBXN1-218ENST00000616865 ATF4P18848 351 aaPredicted RBP11.12□□□□□ -0.63
UBXN1-218ENST00000616865 HAGHQ16775 308 aa11.12□□□□□ -0.63
UBXN1-218ENST00000616865 BPIFA4PQ86YQ2 179 aa11.12□□□□□ -0.63
UBXN1-218ENST00000616865 STXBP6Q8NFX7 210 aa11.12□□□□□ -0.63
UBXN1-218ENST00000616865 GLMPQ8WWB7 406 aa11.12□□□□□ -0.63
UBXN1-218ENST00000616865 TRAV5A0A0B4J249 113 aa11.11□□□□□ -0.63
UBXN1-218ENST00000616865 UMAD1C9J7I0 102 aa11.11□□□□□ -0.63
UBXN1-218ENST00000616865 CDC34P49427 236 aaPredicted RBP11.11□□□□□ -0.63
UBXN1-218ENST00000616865 KHDC3LQ587J8 217 aa11.11□□□□□ -0.63
UBXN1-218ENST00000616865 SPATA31B1PQ5VZV4 182 aa11.11□□□□□ -0.63
UBXN1-218ENST00000616865 MIR17HGQ75NE6 70 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms