RNA–Protein interactions for RNA: ENST00000614944.4

VPS11-206, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS11, Length 3,388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-206ENST00000614944 GNG5P63218 68 aa7.1□□□□□ -1.27
VPS11-206ENST00000614944 C8orf31Q8N9H6 132 aa7.1□□□□□ -1.27
VPS11-206ENST00000614944 SCGB1C1Q8TD33 95 aa7.1□□□□□ -1.27
VPS11-206ENST00000614944 COQ2Q96H96 371 aa7.1□□□□□ -1.27
VPS11-206ENST00000614944 PKD1L2Q7Z442 2459 aa7.1□□□□□ -1.27
VPS11-206ENST00000614944 IGKV1D-8A0A087WSZ0 117 aa7.1□□□□□ -1.27
VPS11-206ENST00000614944 WNT9BO14905 357 aa7.1□□□□□ -1.27
VPS11-206ENST00000614944 RNF152Q8N8N0 203 aa7.1□□□□□ -1.27
VPS11-206ENST00000614944 OR1L1Q8NH94 360 aa7.1□□□□□ -1.27
VPS11-206ENST00000614944 ATP6V0E2Q8NHE4 81 aa7.1□□□□□ -1.27
VPS11-206ENST00000614944 HDHD3Q9BSH5 251 aaPredicted RBP7.1□□□□□ -1.27
VPS11-206ENST00000614944 C1RLQ9NZP8 487 aa7.1□□□□□ -1.27
VPS11-206ENST00000614944 TLN1Q9Y490 2541 aaKnown RBP7.1□□□□□ -1.27
VPS11-206ENST00000614944 ATMQ13315 3056 aa7.1□□□□□ -1.27
VPS11-206ENST00000614944 DYSFO75923 2080 aa7.1□□□□□ -1.27
VPS11-206ENST00000614944 RBP4P02753 201 aa7.09□□□□□ -1.27
VPS11-206ENST00000614944 COL6A6A6NMZ7 2263 aa7.09□□□□□ -1.27
VPS11-206ENST00000614944 SLC25A5P05141 298 aaKnown RBP7.09□□□□□ -1.27
VPS11-206ENST00000614944 DYNLT3P51808 116 aa7.09□□□□□ -1.27
VPS11-206ENST00000614944 TMEM136Q6ZRR5 245 aa7.09□□□□□ -1.27
VPS11-206ENST00000614944 V9GYY9 64 aa7.09□□□□□ -1.27
VPS11-206ENST00000614944 SPTBN2O15020 2390 aa7.09□□□□□ -1.27
VPS11-206ENST00000614944 A0A1W2PPI3 338 aa7.09□□□□□ -1.27
VPS11-206ENST00000614944 ZDHHC16Q969W1 377 aa7.09□□□□□ -1.27
VPS11-206ENST00000614944 NEIL1Q96FI4 390 aaPredicted RBP7.09□□□□□ -1.27
VPS11-206ENST00000614944 A0A1B0GX51 115 aa7.08□□□□□ -1.28
VPS11-206ENST00000614944 OR2T6Q8NHC8 308 aa7.08□□□□□ -1.28
VPS11-206ENST00000614944 KIR2DL4Q99706 377 aa7.08□□□□□ -1.28
VPS11-206ENST00000614944 PRADC1Q9BSG0 188 aa7.08□□□□□ -1.28
VPS11-206ENST00000614944 SVILO95425 2214 aa7.08□□□□□ -1.28
VPS11-206ENST00000614944 TRAV5A0A0B4J249 113 aa7.08□□□□□ -1.28
VPS11-206ENST00000614944 A0A1W2PRX2 142 aa7.08□□□□□ -1.28
VPS11-206ENST00000614944 CRXO43186 299 aaPredicted RBP7.08□□□□□ -1.28
VPS11-206ENST00000614944 ORM2P19652 201 aa7.08□□□□□ -1.28
VPS11-206ENST00000614944 COL8A1P27658 744 aa7.08□□□□□ -1.28
VPS11-206ENST00000614944 FHL3Q13643 280 aa7.08□□□□□ -1.28
VPS11-206ENST00000614944 ZNF726P1Q15940 193 aa7.08□□□□□ -1.28
VPS11-206ENST00000614944 TMEM252Q8N6L7 170 aa7.08□□□□□ -1.28
VPS11-206ENST00000614944 OR10G8Q8NGN5 311 aa7.08□□□□□ -1.28
VPS11-206ENST00000614944 GTSF1Q8WW33 167 aa7.08□□□□□ -1.28
VPS11-206ENST00000614944 IL36BQ9NZH7 164 aa7.08□□□□□ -1.28
VPS11-206ENST00000614944 IGKV1-6A0A0C4DH72 117 aa7.08□□□□□ -1.28
VPS11-206ENST00000614944 TINCRA0A1B0GVN0 87 aa7.08□□□□□ -1.28
VPS11-206ENST00000614944 H3BMG7 143 aa7.08□□□□□ -1.28
VPS11-206ENST00000614944 IBA57Q5T440 356 aaKnown RBP7.08□□□□□ -1.28
VPS11-206ENST00000614944 OR2W1Q9Y3N9 320 aa7.08□□□□□ -1.28
VPS11-206ENST00000614944 CRYM-AS1A6NIL9 109 aa7.07□□□□□ -1.28
VPS11-206ENST00000614944 TMEM262E9PQX1 116 aa7.07□□□□□ -1.28
VPS11-206ENST00000614944 NPFFO15130 113 aa7.07□□□□□ -1.28
VPS11-206ENST00000614944 PPYP01298 95 aa7.07□□□□□ -1.28
VPS11-206ENST00000614944 EFNA4P52798 201 aa7.07□□□□□ -1.28
VPS11-206ENST00000614944 CCL8P80075 99 aa7.07□□□□□ -1.28
VPS11-206ENST00000614944 SIRPDQ9H106 197 aa7.07□□□□□ -1.28
VPS11-206ENST00000614944 EDA2RQ9HAV5 297 aa7.07□□□□□ -1.28
VPS11-206ENST00000614944 SLC39A9Q9NUM3 307 aa7.07□□□□□ -1.28
VPS11-206ENST00000614944 RABAC1Q9UI14 185 aa7.07□□□□□ -1.28
VPS11-206ENST00000614944 USP24Q9UPU5 2620 aa7.07□□□□□ -1.28
VPS11-206ENST00000614944 FAM90A26D6RGX4 464 aa7.07□□□□□ -1.28
VPS11-206ENST00000614944 CST7O76096 145 aa7.07□□□□□ -1.28
VPS11-206ENST00000614944 NMSQ5H8A3 153 aa7.07□□□□□ -1.28
VPS11-206ENST00000614944 C3orf56Q8N813 242 aa7.07□□□□□ -1.28
VPS11-206ENST00000614944 C1orf43Q9BWL3 253 aa7.07□□□□□ -1.28
VPS11-206ENST00000614944 DSCAML1Q8TD84 2053 aa7.07□□□□□ -1.28
VPS11-206ENST00000614944 A0A1W2PPR1 153 aa7.06□□□□□ -1.28
VPS11-206ENST00000614944 SNCGO76070 127 aa7.06□□□□□ -1.28
VPS11-206ENST00000614944 PRB1P04280 392 aa7.06□□□□□ -1.28
VPS11-206ENST00000614944 SCTP09683 121 aa7.06□□□□□ -1.28
VPS11-206ENST00000614944 LIME1Q9H400 295 aa7.06□□□□□ -1.28
VPS11-206ENST00000614944 METRNQ9UJH8 293 aa7.06□□□□□ -1.28
VPS11-206ENST00000614944 SPINT2O43291 252 aa7.06□□□□□ -1.28
VPS11-206ENST00000614944 EIF4EBP1Q13541 118 aaPredicted RBP7.06□□□□□ -1.28
VPS11-206ENST00000614944 RASL10AQ92737 203 aa7.06□□□□□ -1.28
VPS11-206ENST00000614944 LINC01587Q99440 93 aa7.06□□□□□ -1.28
VPS11-206ENST00000614944 NAA60Q9H7X0 242 aa7.06□□□□□ -1.28
VPS11-206ENST00000614944 MDFICQ9P1T7 246 aa7.06□□□□□ -1.28
VPS11-206ENST00000614944 C12orf77C9JDV5 145 aa7.06□□□□□ -1.28
VPS11-206ENST00000614944 C8orf88P0DMB2 117 aa7.06□□□□□ -1.28
VPS11-206ENST00000614944 PLA2G2AP14555 144 aa7.06□□□□□ -1.28
VPS11-206ENST00000614944 MYOD1P15172 320 aa7.06□□□□□ -1.28
VPS11-206ENST00000614944 RPS28P62857 69 aaKnown RBP7.06□□□□□ -1.28
VPS11-206ENST00000614944 RBPMS2Q6ZRY4 209 aaKnown RBP7.06□□□□□ -1.28
VPS11-206ENST00000614944 ZNF695Q8IW36 515 aa7.06□□□□□ -1.28
VPS11-206ENST00000614944 OR4X2Q8NGF9 303 aa7.06□□□□□ -1.28
VPS11-206ENST00000614944 OR1L4Q8NGR5 311 aa7.06□□□□□ -1.28
VPS11-206ENST00000614944 TIMD4Q96H15 378 aa7.06□□□□□ -1.28
VPS11-206ENST00000614944 MRPL32Q9BYC8 188 aaKnown RBP7.06□□□□□ -1.28
VPS11-206ENST00000614944 CELSR3Q9NYQ7 3312 aa7.06□□□□□ -1.28
VPS11-206ENST00000614944 LAMA5O15230 3695 aa7.06□□□□□ -1.28
VPS11-206ENST00000614944 KMT2BQ9UMN6 2715 aaPredicted RBP7.05□□□□□ -1.28
VPS11-206ENST00000614944 HERV-K104P61576 105 aa7.05□□□□□ -1.28
VPS11-206ENST00000614944 LYZL2Q7Z4W2 148 aa7.05□□□□□ -1.28
VPS11-206ENST00000614944 PPP1R27Q86WC6 154 aa7.05□□□□□ -1.28
VPS11-206ENST00000614944 LY6G5BQ8NDX9 201 aa7.05□□□□□ -1.28
VPS11-206ENST00000614944 ZNRF2Q8NHG8 242 aa7.05□□□□□ -1.28
VPS11-206ENST00000614944 RPEQ96AT9 228 aa7.05□□□□□ -1.28
VPS11-206ENST00000614944 SSBP3Q9BWW4 388 aaPredicted RBP7.05□□□□□ -1.28
VPS11-206ENST00000614944 VSIRQ9H7M9 311 aa7.05□□□□□ -1.28
VPS11-206ENST00000614944 A1L4Q6 167 aa7.05□□□□□ -1.28
VPS11-206ENST00000614944 BMPR1BO00238 502 aa7.05□□□□□ -1.28
VPS11-206ENST00000614944 NDUFB3O43676 98 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms