RNA–Protein interactions for RNA: ENST00000614931.1

PCDH9-205, Transcript of protocadherin 9, humanhuman

TSL 1 (best)

Gene PCDH9, Length 461 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-205ENST00000614931 STAG3L2P0CL84 134 aa6.09□□□□□ -1.43
PCDH9-205ENST00000614931 STAG3L3P0CL85 134 aa6.09□□□□□ -1.43
PCDH9-205ENST00000614931 ARL14EPLP0DKL9 152 aa6.09□□□□□ -1.43
PCDH9-205ENST00000614931 C8orf88P0DMB2 117 aa6.09□□□□□ -1.43
PCDH9-205ENST00000614931 PYYP10082 97 aa6.09□□□□□ -1.43
PCDH9-205ENST00000614931 GP9P14770 177 aa6.09□□□□□ -1.43
PCDH9-205ENST00000614931 MYCNOSP40205 109 aa6.09□□□□□ -1.43
PCDH9-205ENST00000614931 RAB5CP51148 216 aa6.09□□□□□ -1.43
PCDH9-205ENST00000614931 RHOBP62745 196 aa6.09□□□□□ -1.43
PCDH9-205ENST00000614931 FAM106AQ4KMX7 169 aa6.09□□□□□ -1.43
PCDH9-205ENST00000614931 OXLD1Q5BKU9 147 aa6.09□□□□□ -1.43
PCDH9-205ENST00000614931 IL34Q6ZMJ4 242 aa6.09□□□□□ -1.43
PCDH9-205ENST00000614931 LYPD6BQ8NI32 183 aa6.09□□□□□ -1.43
PCDH9-205ENST00000614931 DPF1Q92782 380 aa6.09□□□□□ -1.43
PCDH9-205ENST00000614931 SAT2Q96F10 170 aaPredicted RBP6.09□□□□□ -1.43
PCDH9-205ENST00000614931 MAP1LC3BQ9GZQ8 125 aa6.09□□□□□ -1.43
PCDH9-205ENST00000614931 TMPRSS5Q9H3S3 457 aa6.09□□□□□ -1.43
PCDH9-205ENST00000614931 TECRQ9NZ01 308 aaKnown RBP6.09□□□□□ -1.43
PCDH9-205ENST00000614931 A0A1W2PPV4 95 aa6.08□□□□□ -1.44
PCDH9-205ENST00000614931 C2orf70A6NJV1 201 aa6.08□□□□□ -1.44
PCDH9-205ENST00000614931 K7EMT4 169 aa6.08□□□□□ -1.44
PCDH9-205ENST00000614931 CHEK1O14757 476 aa6.08□□□□□ -1.44
PCDH9-205ENST00000614931 BUB3O43684 328 aa6.08□□□□□ -1.44
PCDH9-205ENST00000614931 CSN3P07498 182 aa6.08□□□□□ -1.44
PCDH9-205ENST00000614931 SNRPCP09234 159 aaKnown RBP6.08□□□□□ -1.44
PCDH9-205ENST00000614931 H2AFB1P0C5Y9 115 aa6.08□□□□□ -1.44
PCDH9-205ENST00000614931 NPPCP23582 126 aa6.08□□□□□ -1.44
PCDH9-205ENST00000614931 GCHFRP30047 84 aa6.08□□□□□ -1.44
PCDH9-205ENST00000614931 CLLU1Q5K131 121 aa6.08□□□□□ -1.44
PCDH9-205ENST00000614931 C16orf54Q6UWD8 224 aa6.08□□□□□ -1.44
PCDH9-205ENST00000614931 LINC00482Q8N8I6 264 aa6.08□□□□□ -1.44
PCDH9-205ENST00000614931 OR9G4Q8NGQ1 327 aa6.08□□□□□ -1.44
PCDH9-205ENST00000614931 SFT2D1Q8WV19 159 aa6.08□□□□□ -1.44
PCDH9-205ENST00000614931 GLMPQ8WWB7 406 aa6.08□□□□□ -1.44
PCDH9-205ENST00000614931 METTL26Q96S19 204 aa6.08□□□□□ -1.44
PCDH9-205ENST00000614931 RNF2Q99496 336 aa6.08□□□□□ -1.44
PCDH9-205ENST00000614931 DAZ1Q9NQZ3 744 aaKnown RBP6.08□□□□□ -1.44
PCDH9-205ENST00000614931 SMPXQ9UHP9 88 aa6.08□□□□□ -1.44
PCDH9-205ENST00000614931 UFC1Q9Y3C8 167 aa6.08□□□□□ -1.44
PCDH9-205ENST00000614931 SMAD5-AS1Q9Y6J3 95 aa6.08□□□□□ -1.44
PCDH9-205ENST00000614931 NOTCH1P46531 2555 aa6.08□□□□□ -1.44
PCDH9-205ENST00000614931 TRAV1-1A0A0B4J248 108 aa6.07□□□□□ -1.44
PCDH9-205ENST00000614931 H3BQ15 152 aa6.07□□□□□ -1.44
PCDH9-205ENST00000614931 H3BTX0 84 aa6.07□□□□□ -1.44
PCDH9-205ENST00000614931 OR10J4P0C629 311 aa6.07□□□□□ -1.44
PCDH9-205ENST00000614931 CD33P20138 364 aa6.07□□□□□ -1.44
PCDH9-205ENST00000614931 BLOC1S1P78537 153 aa6.07□□□□□ -1.44
PCDH9-205ENST00000614931 KHDC3LQ587J8 217 aa6.07□□□□□ -1.44
PCDH9-205ENST00000614931 FXYD5Q96DB9 178 aa6.07□□□□□ -1.44
PCDH9-205ENST00000614931 PAXXQ9BUH6 204 aa6.07□□□□□ -1.44
PCDH9-205ENST00000614931 RHPN1-AS1Q9BWJ2 59 aa6.07□□□□□ -1.44
PCDH9-205ENST00000614931 HRH4Q9H3N8 390 aa6.07□□□□□ -1.44
PCDH9-205ENST00000614931 MLXQ9UH92 298 aa6.07□□□□□ -1.44
PCDH9-205ENST00000614931 SORL1Q92673 2214 aa6.06□□□□□ -1.44
PCDH9-205ENST00000614931 SLC17A3O00476 420 aa6.06□□□□□ -1.44
PCDH9-205ENST00000614931 OVOL1O14753 267 aa6.06□□□□□ -1.44
PCDH9-205ENST00000614931 OR7C2O60412 319 aa6.06□□□□□ -1.44
PCDH9-205ENST00000614931 CXorf1O96002 111 aa6.06□□□□□ -1.44
PCDH9-205ENST00000614931 PF4P02776 101 aa6.06□□□□□ -1.44
PCDH9-205ENST00000614931 PRB2P02812 416 aaPredicted RBP6.06□□□□□ -1.44
PCDH9-205ENST00000614931 IGLC2P0DOY2 106 aa6.06□□□□□ -1.44
PCDH9-205ENST00000614931 FOLR2P14207 255 aa6.06□□□□□ -1.44
PCDH9-205ENST00000614931 IGLL1P15814 213 aa6.06□□□□□ -1.44
PCDH9-205ENST00000614931 CBLN1P23435 193 aa6.06□□□□□ -1.44
PCDH9-205ENST00000614931 TAS2R45P59539 299 aa6.06□□□□□ -1.44
PCDH9-205ENST00000614931 UBE2L3P68036 154 aaKnown RBP6.06□□□□□ -1.44
PCDH9-205ENST00000614931 FAM90A2PQ658T7 463 aa6.06□□□□□ -1.44
PCDH9-205ENST00000614931 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.06□□□□□ -1.44
PCDH9-205ENST00000614931 PQLC2Q6ZP29 291 aa6.06□□□□□ -1.44
PCDH9-205ENST00000614931 IQCF2Q8IXL9 164 aa6.06□□□□□ -1.44
PCDH9-205ENST00000614931 SUN5Q8TC36 379 aa6.06□□□□□ -1.44
PCDH9-205ENST00000614931 LRRC20Q8TCA0 184 aa6.06□□□□□ -1.44
PCDH9-205ENST00000614931 ELOVL1Q9BW60 279 aa6.06□□□□□ -1.44
PCDH9-205ENST00000614931 OR51M1Q9H341 326 aa6.06□□□□□ -1.44
PCDH9-205ENST00000614931 ZNF586Q9NXT0 402 aa6.06□□□□□ -1.44
PCDH9-205ENST00000614931 TMEM14CQ9P0S9 112 aa6.06□□□□□ -1.44
PCDH9-205ENST00000614931 YTHDF2Q9Y5A9 579 aaKnown RBP6.06□□□□□ -1.44
PCDH9-205ENST00000614931 A0A087X0K7 114 aa6.05□□□□□ -1.44
PCDH9-205ENST00000614931 NDUFB4O95168 129 aa6.05□□□□□ -1.44
PCDH9-205ENST00000614931 HBE1P02100 147 aa6.05□□□□□ -1.44
PCDH9-205ENST00000614931 PRB4P10163 310 aaPredicted RBP6.05□□□□□ -1.44
PCDH9-205ENST00000614931 HIST1H1EP10412 219 aaKnown RBP6.05□□□□□ -1.44
PCDH9-205ENST00000614931 UBE2G2P60604 165 aa6.05□□□□□ -1.44
PCDH9-205ENST00000614931 C1orf194Q5T5A4 169 aa6.05□□□□□ -1.44
PCDH9-205ENST00000614931 SIGLEC15Q6ZMC9 328 aa6.05□□□□□ -1.44
PCDH9-205ENST00000614931 BPIFA4PQ86YQ2 179 aa6.05□□□□□ -1.44
PCDH9-205ENST00000614931 OR8I2Q8N0Y5 310 aa6.05□□□□□ -1.44
PCDH9-205ENST00000614931 BLNKQ8WV28 456 aa6.05□□□□□ -1.44
PCDH9-205ENST00000614931 AURKAIP1Q9NWT8 199 aaPredicted RBP6.05□□□□□ -1.44
PCDH9-205ENST00000614931 AGRNO00468 2067 aa6.05□□□□□ -1.44
PCDH9-205ENST00000614931 CMYA5Q8N3K9 4069 aa6.04□□□□□ -1.44
PCDH9-205ENST00000614931 TGP01266 2768 aa6.04□□□□□ -1.44
PCDH9-205ENST00000614931 LOC102723971A0A1B0GUV8 181 aa6.04□□□□□ -1.44
PCDH9-205ENST00000614931 LINC00862A6NCI5 91 aa6.04□□□□□ -1.44
PCDH9-205ENST00000614931 IZUMO1RA6ND01 250 aa6.04□□□□□ -1.44
PCDH9-205ENST00000614931 SOCS3O14543 225 aa6.04□□□□□ -1.44
PCDH9-205ENST00000614931 RPL7P18124 248 aaKnown RBP6.04□□□□□ -1.44
PCDH9-205ENST00000614931 HLA-DMBP28068 263 aa6.04□□□□□ -1.44
PCDH9-205ENST00000614931 ATP5G3P48201 142 aa6.04□□□□□ -1.44
PCDH9-205ENST00000614931 RAB14P61106 215 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms