RNA–Protein interactions for RNA: ENST00000614678.1

CPNE3-208, Transcript of copine 3, humanhuman

TSL 1 (best)

Gene CPNE3, Length 4,201 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-208ENST00000614678 NRN1Q9NPD7 142 aa4.14□□□□□ -1.75
CPNE3-208ENST00000614678 IGHV3OR16-12A0A075B7B8 117 aa4.14□□□□□ -1.75
CPNE3-208ENST00000614678 TRAV30A0A087WSZ9 112 aa4.14□□□□□ -1.75
CPNE3-208ENST00000614678 HELTA6NFD8 242 aa4.14□□□□□ -1.75
CPNE3-208ENST00000614678 H3BQ15 152 aa4.14□□□□□ -1.75
CPNE3-208ENST00000614678 MED6O75586 246 aa4.14□□□□□ -1.75
CPNE3-208ENST00000614678 EIF2B2P49770 351 aaKnown RBP4.14□□□□□ -1.75
CPNE3-208ENST00000614678 NANOS2P60321 138 aaKnown RBP4.14□□□□□ -1.75
CPNE3-208ENST00000614678 CELA1Q9UNI1 258 aa4.14□□□□□ -1.75
CPNE3-208ENST00000614678 DEDDO75618 318 aa4.14□□□□□ -1.75
CPNE3-208ENST00000614678 RBMY1A1P0DJD3 496 aaKnown RBP4.14□□□□□ -1.75
CPNE3-208ENST00000614678 RBMY1CP0DJD4 496 aa4.14□□□□□ -1.75
CPNE3-208ENST00000614678 RBMY1FQ15415 496 aaKnown RBP4.14□□□□□ -1.75
CPNE3-208ENST00000614678 TRPT1Q86TN4 253 aaKnown RBP4.14□□□□□ -1.75
CPNE3-208ENST00000614678 ZNF709Q8N972 641 aa4.14□□□□□ -1.75
CPNE3-208ENST00000614678 OR4B1Q8NGF8 309 aa4.14□□□□□ -1.75
CPNE3-208ENST00000614678 CHAC2Q8WUX2 184 aa4.14□□□□□ -1.75
CPNE3-208ENST00000614678 CIB3Q96Q77 187 aaPredicted RBP4.14□□□□□ -1.75
CPNE3-208ENST00000614678 CSTL1Q9H114 145 aa4.14□□□□□ -1.75
CPNE3-208ENST00000614678 ARV1Q9H2C2 271 aa4.14□□□□□ -1.75
CPNE3-208ENST00000614678 MGAT4CQ9UBM8 478 aa4.14□□□□□ -1.75
CPNE3-208ENST00000614678 DNAH2Q9P225 4427 aa4.14□□□□□ -1.75
CPNE3-208ENST00000614678 TRAV12-2A0A075B6T6 113 aa4.13□□□□□ -1.75
CPNE3-208ENST00000614678 M0R2Z0 102 aa4.13□□□□□ -1.75
CPNE3-208ENST00000614678 MRPS12O15235 138 aaKnown RBP4.13□□□□□ -1.75
CPNE3-208ENST00000614678 SSNA1O43805 119 aa4.13□□□□□ -1.75
CPNE3-208ENST00000614678 PYYP10082 97 aa4.13□□□□□ -1.75
CPNE3-208ENST00000614678 FAM78BQ5VT40 261 aa4.13□□□□□ -1.75
CPNE3-208ENST00000614678 CSNK1G2-AS1Q8NCQ2 148 aa4.13□□□□□ -1.75
CPNE3-208ENST00000614678 OR5C1Q8NGR4 320 aa4.13□□□□□ -1.75
CPNE3-208ENST00000614678 OR11H2Q8NH07 326 aa4.13□□□□□ -1.75
CPNE3-208ENST00000614678 LYRM2Q9NU23 88 aaPredicted RBP4.13□□□□□ -1.75
CPNE3-208ENST00000614678 SLC45A2Q9UMX9 530 aa4.13□□□□□ -1.75
CPNE3-208ENST00000614678 H3BMM0 161 aa4.13□□□□□ -1.75
CPNE3-208ENST00000614678 SPRY2O43597 315 aa4.13□□□□□ -1.75
CPNE3-208ENST00000614678 TSC22D2O75157 780 aa4.13□□□□□ -1.75
CPNE3-208ENST00000614678 OPCMLQ14982 345 aa4.13□□□□□ -1.75
CPNE3-208ENST00000614678 LINC00305Q7Z4B0 112 aa4.13□□□□□ -1.75
CPNE3-208ENST00000614678 RNF183Q96D59 192 aa4.13□□□□□ -1.75
CPNE3-208ENST00000614678 SEPSECSQ9HD40 501 aaKnown RBP4.13□□□□□ -1.75
CPNE3-208ENST00000614678 MBD2Q9UBB5 411 aa4.13□□□□□ -1.75
CPNE3-208ENST00000614678 ELOA3CA0A087WX78 387 aaPredicted RBP4.13□□□□□ -1.75
CPNE3-208ENST00000614678 H3BRN7 92 aa4.13□□□□□ -1.75
CPNE3-208ENST00000614678 J3KRW8 73 aa4.13□□□□□ -1.75
CPNE3-208ENST00000614678 L7N2F9 121 aa4.13□□□□□ -1.75
CPNE3-208ENST00000614678 VAMP2P63027 116 aa4.13□□□□□ -1.75
CPNE3-208ENST00000614678 LINC00299Q6ZSB3 139 aa4.13□□□□□ -1.75
CPNE3-208ENST00000614678 STHQ8IWL8 128 aa4.13□□□□□ -1.75
CPNE3-208ENST00000614678 GPN1Q9HCN4 374 aaPredicted RBP4.13□□□□□ -1.75
CPNE3-208ENST00000614678 NPVFQ9HCQ7 196 aa4.13□□□□□ -1.75
CPNE3-208ENST00000614678 PRELID1Q9Y255 219 aa4.13□□□□□ -1.75
CPNE3-208ENST00000614678 X6R8D5 127 aa4.13□□□□□ -1.75
CPNE3-208ENST00000614678 HMGB3O15347 200 aaKnown RBP4.13□□□□□ -1.75
CPNE3-208ENST00000614678 EMP1P54849 157 aa4.13□□□□□ -1.75
CPNE3-208ENST00000614678 TEPPQ6URK8 271 aa4.13□□□□□ -1.75
CPNE3-208ENST00000614678 BAP18Q8IXM2 172 aa4.13□□□□□ -1.75
CPNE3-208ENST00000614678 RARRES2Q99969 163 aa4.13□□□□□ -1.75
CPNE3-208ENST00000614678 A0A1W2PS18 150 aa4.12□□□□□ -1.75
CPNE3-208ENST00000614678 G3V3Q6 166 aa4.12□□□□□ -1.75
CPNE3-208ENST00000614678 M0R3E3 92 aa4.12□□□□□ -1.75
CPNE3-208ENST00000614678 MPC2O95563 127 aa4.12□□□□□ -1.75
CPNE3-208ENST00000614678 B2MP61769 119 aa4.12□□□□□ -1.75
CPNE3-208ENST00000614678 BAXQ07812 192 aa4.12□□□□□ -1.75
CPNE3-208ENST00000614678 NACAE9PAV3 2078 aa4.12□□□□□ -1.75
CPNE3-208ENST00000614678 BTF3P20290 206 aaKnown RBP4.12□□□□□ -1.75
CPNE3-208ENST00000614678 CAMLGP49069 296 aa4.12□□□□□ -1.75
CPNE3-208ENST00000614678 PAFAH1B2P68402 229 aa4.12□□□□□ -1.75
CPNE3-208ENST00000614678 DLK1P80370 383 aa4.12□□□□□ -1.75
CPNE3-208ENST00000614678 SLC51BQ86UW2 128 aa4.12□□□□□ -1.75
CPNE3-208ENST00000614678 SHANK2-AS3Q9BTD1 123 aa4.12□□□□□ -1.75
CPNE3-208ENST00000614678 DNAH10Q8IVF4 4471 aa4.12□□□□□ -1.75
CPNE3-208ENST00000614678 IGHV4-28A0A0C4DH34 117 aa4.12□□□□□ -1.75
CPNE3-208ENST00000614678 FGF7P21781 194 aa4.12□□□□□ -1.75
CPNE3-208ENST00000614678 SULT1A1P50225 295 aa4.12□□□□□ -1.75
CPNE3-208ENST00000614678 PRR20EP86478 221 aa4.12□□□□□ -1.75
CPNE3-208ENST00000614678 PRR20CP86479 221 aa4.12□□□□□ -1.75
CPNE3-208ENST00000614678 PRR20DP86480 221 aa4.12□□□□□ -1.75
CPNE3-208ENST00000614678 PRR20BP86481 221 aa4.12□□□□□ -1.75
CPNE3-208ENST00000614678 PRR20AP86496 221 aa4.12□□□□□ -1.75
CPNE3-208ENST00000614678 SPINK13Q1W4C9 94 aa4.12□□□□□ -1.75
CPNE3-208ENST00000614678 MIR17HGQ75NE6 70 aa4.12□□□□□ -1.75
CPNE3-208ENST00000614678 Q8NAQ8 132 aa4.12□□□□□ -1.75
CPNE3-208ENST00000614678 IL17DQ8TAD2 202 aa4.12□□□□□ -1.75
CPNE3-208ENST00000614678 C16orf92Q96LL3 132 aa4.12□□□□□ -1.75
CPNE3-208ENST00000614678 WDR83OSQ9Y284 106 aa4.12□□□□□ -1.75
CPNE3-208ENST00000614678 HYPMO75409 117 aa4.11□□□□□ -1.75
CPNE3-208ENST00000614678 OR10J4P0C629 311 aa4.11□□□□□ -1.75
CPNE3-208ENST00000614678 ZNF586Q9NXT0 402 aa4.11□□□□□ -1.75
CPNE3-208ENST00000614678 HIGD1AQ9Y241 93 aa4.11□□□□□ -1.75
CPNE3-208ENST00000614678 AMTNQ6UX39 209 aa4.11□□□□□ -1.75
CPNE3-208ENST00000614678 Q6ZWC4 215 aa4.11□□□□□ -1.75
CPNE3-208ENST00000614678 NOXA1Q86UR1 476 aa4.11□□□□□ -1.75
CPNE3-208ENST00000614678 C1orf158Q8N1D5 194 aa4.11□□□□□ -1.75
CPNE3-208ENST00000614678 EXOC3-AS1Q8N2X6 119 aa4.11□□□□□ -1.75
CPNE3-208ENST00000614678 TMEM147Q9BVK8 224 aa4.11□□□□□ -1.75
CPNE3-208ENST00000614678 NPCDR1Q9BY65 106 aa4.11□□□□□ -1.75
CPNE3-208ENST00000614678 FBXL17Q9UF56 701 aa4.11□□□□□ -1.75
CPNE3-208ENST00000614678 CRXO43186 299 aaPredicted RBP4.11□□□□□ -1.75
CPNE3-208ENST00000614678 AZU1P20160 251 aa4.11□□□□□ -1.75
CPNE3-208ENST00000614678 CNN1P51911 297 aaKnown RBP4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms