RNA–Protein interactions for RNA: ENST00000612548.4

CIT-219, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 1 (best) BASIC

Gene CIT, Length 1,799 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-219ENST00000612548 STXBP6Q8NFX7 210 aa11.35□□□□□ -0.59
CIT-219ENST00000612548 WIPF2Q8TF74 440 aaPredicted RBP11.35□□□□□ -0.59
CIT-219ENST00000612548 FXYD5Q96DB9 178 aa11.35□□□□□ -0.59
CIT-219ENST00000612548 SEC11CQ9BY50 192 aa11.35□□□□□ -0.59
CIT-219ENST00000612548 YTHDF2Q9Y5A9 579 aaKnown RBP11.35□□□□□ -0.59
CIT-219ENST00000612548 HAX1O00165 279 aa11.34□□□□□ -0.59
CIT-219ENST00000612548 TAGLN2P37802 199 aaKnown RBP11.34□□□□□ -0.59
CIT-219ENST00000612548 ATP5G3P48201 142 aa11.34□□□□□ -0.59
CIT-219ENST00000612548 CEBPGP53567 150 aa11.34□□□□□ -0.59
CIT-219ENST00000612548 C11orf44Q8N8P7 122 aa11.34□□□□□ -0.59
CIT-219ENST00000612548 OR4F5Q8NH21 305 aa11.34□□□□□ -0.59
CIT-219ENST00000612548 METTL26Q96S19 204 aa11.34□□□□□ -0.59
CIT-219ENST00000612548 SMDT1Q9H4I9 107 aa11.34□□□□□ -0.59
CIT-219ENST00000612548 PRELID1Q9Y255 219 aa11.34□□□□□ -0.59
CIT-219ENST00000612548 NIPBLQ6KC79 2804 aaeCLIP11.34□□□□□ -0.591e-5■□□□□ 11.1
CIT-219ENST00000612548 C11orf94C9JXX5 98 aa11.33□□□□□ -0.59
CIT-219ENST00000612548 F8W036 122 aa11.33□□□□□ -0.59
CIT-219ENST00000612548 SRP19P09132 144 aaKnown RBP11.33□□□□□ -0.59
CIT-219ENST00000612548 ADCYAP1P18509 176 aa11.33□□□□□ -0.59
CIT-219ENST00000612548 CD81P60033 236 aa11.33□□□□□ -0.59
CIT-219ENST00000612548 BLNKQ8WV28 456 aa11.33□□□□□ -0.59
CIT-219ENST00000612548 OR4F4Q96R69 305 aa11.33□□□□□ -0.59
CIT-219ENST00000612548 SLC35B3Q9H1N7 401 aa11.33□□□□□ -0.59
CIT-219ENST00000612548 C2CD3Q4AC94 2353 aa11.33□□□□□ -0.6
CIT-219ENST00000612548 IGHV4OR15-8A0A075B7B6 117 aa11.33□□□□□ -0.6
CIT-219ENST00000612548 IGHV3OR16-13A0A075B7E8 117 aa11.33□□□□□ -0.6
CIT-219ENST00000612548 A0A087WW49 117 aa11.33□□□□□ -0.6
CIT-219ENST00000612548 IGHV3-49A0A0A0MS15 119 aa11.33□□□□□ -0.6
CIT-219ENST00000612548 IGHV3-74A0A0B4J1X5 117 aa11.33□□□□□ -0.6
CIT-219ENST00000612548 IGHV3-66A0A0C4DH42 116 aa11.33□□□□□ -0.6
CIT-219ENST00000612548 ZNF320A2RRD8 509 aa11.33□□□□□ -0.6
CIT-219ENST00000612548 H3BTX0 84 aa11.33□□□□□ -0.6
CIT-219ENST00000612548 SNAPINO95295 136 aa11.33□□□□□ -0.6
CIT-219ENST00000612548 FLI1Q01543 452 aaPredicted RBP11.33□□□□□ -0.6
CIT-219ENST00000612548 BPIFA4PQ86YQ2 179 aa11.33□□□□□ -0.6
CIT-219ENST00000612548 CYB561D1Q8N8Q1 229 aa11.33□□□□□ -0.6
CIT-219ENST00000612548 TMEM190Q8WZ59 177 aa11.33□□□□□ -0.6
CIT-219ENST00000612548 TMEM14CQ9P0S9 112 aa11.33□□□□□ -0.6
CIT-219ENST00000612548 RNF114Q9Y508 228 aa11.33□□□□□ -0.6
CIT-219ENST00000612548 TEP1Q99973 2627 aaKnown RBP11.33□□□□□ -0.6
CIT-219ENST00000612548 APOHP02749 345 aaPredicted RBP11.32□□□□□ -0.6
CIT-219ENST00000612548 CD28P10747 220 aa11.32□□□□□ -0.6
CIT-219ENST00000612548 S100A7P31151 101 aa11.32□□□□□ -0.6
CIT-219ENST00000612548 CDX1P47902 265 aaPredicted RBP11.32□□□□□ -0.6
CIT-219ENST00000612548 GUCA2BQ16661 112 aa11.32□□□□□ -0.6
CIT-219ENST00000612548 RPEL1Q2QD12 228 aa11.32□□□□□ -0.6
CIT-219ENST00000612548 DEFB136Q30KP8 78 aa11.32□□□□□ -0.6
CIT-219ENST00000612548 MRPS12O15235 138 aaKnown RBP11.31□□□□□ -0.6
CIT-219ENST00000612548 NBEAP1P0C6P0 100 aa11.31□□□□□ -0.6
CIT-219ENST00000612548 NPPCP23582 126 aa11.31□□□□□ -0.6
CIT-219ENST00000612548 CRYBB3P26998 211 aa11.31□□□□□ -0.6
CIT-219ENST00000612548 OR8I2Q8N0Y5 310 aa11.31□□□□□ -0.6
CIT-219ENST00000612548 KLHL30-AS1Q8NEE0 82 aa11.31□□□□□ -0.6
CIT-219ENST00000612548 OR4F17Q8NGA8 305 aa11.31□□□□□ -0.6
CIT-219ENST00000612548 C4orf3Q8WVX3 66 aa11.31□□□□□ -0.6
CIT-219ENST00000612548 ARL2-SNX15V9GYD0 113 aa11.31□□□□□ -0.6
CIT-219ENST00000612548 H3BQ15 152 aa11.31□□□□□ -0.6
CIT-219ENST00000612548 BUB3O43684 328 aa11.31□□□□□ -0.6
CIT-219ENST00000612548 FAM106AQ4KMX7 169 aa11.31□□□□□ -0.6
CIT-219ENST00000612548 ZNF586Q9NXT0 402 aa11.31□□□□□ -0.6
CIT-219ENST00000612548 RNF24Q9Y225 148 aa11.31□□□□□ -0.6
CIT-219ENST00000612548 MAST4O15021 2626 aa11.3□□□□□ -0.6
CIT-219ENST00000612548 GGTLC3B5MD39 225 aa11.3□□□□□ -0.6
CIT-219ENST00000612548 IGLC2P0DOY2 106 aa11.3□□□□□ -0.6
CIT-219ENST00000612548 HIST1H1EP10412 219 aaKnown RBP11.3□□□□□ -0.6
CIT-219ENST00000612548 RPL7P18124 248 aaKnown RBP11.3□□□□□ -0.6
CIT-219ENST00000612548 PROK1P58294 105 aa11.3□□□□□ -0.6
CIT-219ENST00000612548 GPHB5Q86YW7 130 aa11.3□□□□□ -0.6
CIT-219ENST00000612548 A0A1W2PRE2 83 aa11.29□□□□□ -0.6
CIT-219ENST00000612548 A0A1W2PRX2 142 aa11.29□□□□□ -0.6
CIT-219ENST00000612548 HOXD3P31249 432 aaPredicted RBP11.29□□□□□ -0.6
CIT-219ENST00000612548 RANP62826 216 aaKnown RBP11.29□□□□□ -0.6
CIT-219ENST00000612548 TM4SF20Q53R12 229 aa11.29□□□□□ -0.6
CIT-219ENST00000612548 SOHLH1Q5JUK2 328 aa11.29□□□□□ -0.6
CIT-219ENST00000612548 TXNDC17Q9BRA2 123 aa11.29□□□□□ -0.6
CIT-219ENST00000612548 U3KQE9 123 aa11.29□□□□□ -0.6
CIT-219ENST00000612548 JMJD1CQ15652 2540 aa11.29□□□□□ -0.6
CIT-219ENST00000612548 SCO2A0A1W2PP80 73 aa11.28□□□□□ -0.6
CIT-219ENST00000612548 PDE6DO43924 150 aa11.28□□□□□ -0.6
CIT-219ENST00000612548 SUMO1P63165 101 aaKnown RBP11.28□□□□□ -0.6
CIT-219ENST00000612548 C8orf86Q6ZUL3 223 aa11.28□□□□□ -0.6
CIT-219ENST00000612548 OR11H1Q8NG94 326 aa11.28□□□□□ -0.6
CIT-219ENST00000612548 C17orf77Q96MU5 243 aa11.28□□□□□ -0.6
CIT-219ENST00000612548 DUX3Q96PT4 197 aa11.28□□□□□ -0.6
CIT-219ENST00000612548 CITED2Q99967 270 aaPredicted RBP11.28□□□□□ -0.6
CIT-219ENST00000612548 F6UZH7 168 aa11.28□□□□□ -0.6
CIT-219ENST00000612548 LINC01619G3V211 115 aa11.28□□□□□ -0.6
CIT-219ENST00000612548 TMEM250H0YL14 139 aa11.28□□□□□ -0.6
CIT-219ENST00000612548 EDN2P20800 178 aa11.28□□□□□ -0.6
CIT-219ENST00000612548 SLURP1P55000 103 aa11.28□□□□□ -0.6
CIT-219ENST00000612548 SYNJ2BPP57105 145 aa11.28□□□□□ -0.6
CIT-219ENST00000612548 FAM90A2PQ658T7 463 aa11.28□□□□□ -0.6
CIT-219ENST00000612548 RPUSD4Q96CM3 377 aaKnown RBP11.28□□□□□ -0.6
CIT-219ENST00000612548 DAZ1Q9NQZ3 744 aaKnown RBP11.28□□□□□ -0.6
CIT-219ENST00000612548 TRBV19A0A075B6N1 114 aa11.27□□□□□ -0.61
CIT-219ENST00000612548 SLC17A3O00476 420 aa11.27□□□□□ -0.61
CIT-219ENST00000612548 NDUFS6O75380 124 aaKnown RBP11.27□□□□□ -0.61
CIT-219ENST00000612548 ZNF674Q2M3X9 581 aa11.27□□□□□ -0.61
CIT-219ENST00000612548 C1orf194Q5T5A4 169 aa11.27□□□□□ -0.61
CIT-219ENST00000612548 OR1N2Q8NGR9 330 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms