RNA–Protein interactions for RNA: ENST00000612509.4

SEMA3B-211, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-211ENST00000612509 BAXQ07812 192 aa13.24□□□□□ -0.29
SEMA3B-211ENST00000612509 RAB31Q13636 194 aa13.24□□□□□ -0.29
SEMA3B-211ENST00000612509 MORN3Q6PF18 240 aaPredicted RBP13.24□□□□□ -0.29
SEMA3B-211ENST00000612509 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.24□□□□□ -0.29
SEMA3B-211ENST00000612509 PATE2Q6UY27 113 aa13.24□□□□□ -0.29
SEMA3B-211ENST00000612509 S100A7AQ86SG5 101 aa13.24□□□□□ -0.29
SEMA3B-211ENST00000612509 GATAD1Q8WUU5 269 aa13.24□□□□□ -0.29
SEMA3B-211ENST00000612509 C17orf77Q96MU5 243 aa13.24□□□□□ -0.29
SEMA3B-211ENST00000612509 SLC25A31Q9H0C2 315 aa13.24□□□□□ -0.29
SEMA3B-211ENST00000612509 ISLRO14498 428 aa13.23□□□□□ -0.29
SEMA3B-211ENST00000612509 COX7A2P2O60397 106 aa13.23□□□□□ -0.29
SEMA3B-211ENST00000612509 PET100P0DJ07 73 aa13.23□□□□□ -0.29
SEMA3B-211ENST00000612509 RPL7P18124 248 aaKnown RBP13.23□□□□□ -0.29
SEMA3B-211ENST00000612509 OPCMLQ14982 345 aa13.23□□□□□ -0.29
SEMA3B-211ENST00000612509 ATP6V1FQ16864 119 aa13.23□□□□□ -0.29
SEMA3B-211ENST00000612509 CASC10Q5T4H9 136 aa13.23□□□□□ -0.29
SEMA3B-211ENST00000612509 MIC13Q5XKP0 118 aa13.23□□□□□ -0.29
SEMA3B-211ENST00000612509 LINC00052Q96N35 136 aa13.23□□□□□ -0.29
SEMA3B-211ENST00000612509 RSG1Q9BU20 258 aa13.23□□□□□ -0.29
SEMA3B-211ENST00000612509 MPC2O95563 127 aa13.22□□□□□ -0.29
SEMA3B-211ENST00000612509 HLA-DRB4P13762 266 aa13.22□□□□□ -0.29
SEMA3B-211ENST00000612509 ATF4P18848 351 aaPredicted RBP13.22□□□□□ -0.29
SEMA3B-211ENST00000612509 FGF7P21781 194 aa13.22□□□□□ -0.29
SEMA3B-211ENST00000612509 PRR20EP86478 221 aa13.22□□□□□ -0.29
SEMA3B-211ENST00000612509 PRR20CP86479 221 aa13.22□□□□□ -0.29
SEMA3B-211ENST00000612509 PRR20DP86480 221 aa13.22□□□□□ -0.29
SEMA3B-211ENST00000612509 PRR20BP86481 221 aa13.22□□□□□ -0.29
SEMA3B-211ENST00000612509 PRR20AP86496 221 aa13.22□□□□□ -0.29
SEMA3B-211ENST00000612509 NHLH2Q02577 135 aa13.22□□□□□ -0.29
SEMA3B-211ENST00000612509 ZFAND6Q6FIF0 208 aa13.22□□□□□ -0.29
SEMA3B-211ENST00000612509 OR5C1Q8NGR4 320 aa13.22□□□□□ -0.29
SEMA3B-211ENST00000612509 C16orf92Q96LL3 132 aa13.22□□□□□ -0.29
SEMA3B-211ENST00000612509 HLA-DRB4X5D2U9 266 aa13.22□□□□□ -0.29
SEMA3B-211ENST00000612509 A0A0J9YWU9 116 aa13.21□□□□□ -0.29
SEMA3B-211ENST00000612509 H3BMM0 161 aa13.21□□□□□ -0.29
SEMA3B-211ENST00000612509 GIG44P09565 113 aaPredicted RBP13.21□□□□□ -0.29
SEMA3B-211ENST00000612509 DEFB1P60022 68 aa13.21□□□□□ -0.29
SEMA3B-211ENST00000612509 B2MP61769 119 aa13.21□□□□□ -0.29
SEMA3B-211ENST00000612509 TMEM41BQ5BJD5 291 aa13.21□□□□□ -0.29
SEMA3B-211ENST00000612509 GDF5OSQ5U4N7 250 aa13.21□□□□□ -0.29
SEMA3B-211ENST00000612509 FOXI2Q6ZQN5 318 aa13.21□□□□□ -0.29
SEMA3B-211ENST00000612509 LINC00305Q7Z4B0 112 aa13.21□□□□□ -0.29
SEMA3B-211ENST00000612509 TMEM37Q8WXS4 190 aa13.21□□□□□ -0.29
SEMA3B-211ENST00000612509 C20orf173Q96LM9 149 aa13.21□□□□□ -0.29
SEMA3B-211ENST00000612509 SAV1Q9H4B6 383 aaPredicted RBP13.21□□□□□ -0.29
SEMA3B-211ENST00000612509 RNF24Q9Y225 148 aa13.21□□□□□ -0.29
SEMA3B-211ENST00000612509 A0A087X0K7 114 aa13.2□□□□□ -0.3
SEMA3B-211ENST00000612509 RPL29P47914 159 aaKnown RBP13.2□□□□□ -0.3
SEMA3B-211ENST00000612509 CLINT1Q14677 625 aa13.2□□□□□ -0.3
SEMA3B-211ENST00000612509 C10orf113Q5VZT2 155 aa13.2□□□□□ -0.3
SEMA3B-211ENST00000612509 Q6ZRG5 221 aa13.2□□□□□ -0.3
SEMA3B-211ENST00000612509 NPCDR1Q9BY65 106 aa13.2□□□□□ -0.3
SEMA3B-211ENST00000612509 MBD2Q9UBB5 411 aa13.2□□□□□ -0.3
SEMA3B-211ENST00000612509 ELOA3CA0A087WX78 387 aaPredicted RBP13.19□□□□□ -0.3
SEMA3B-211ENST00000612509 MRPS12O15235 138 aaKnown RBP13.19□□□□□ -0.3
SEMA3B-211ENST00000612509 MPDU1O75352 247 aa13.19□□□□□ -0.3
SEMA3B-211ENST00000612509 CXCL3P19876 107 aa13.19□□□□□ -0.3
SEMA3B-211ENST00000612509 FGL1Q08830 312 aa13.19□□□□□ -0.3
SEMA3B-211ENST00000612509 MORN5Q5VZ52 161 aa13.19□□□□□ -0.3
SEMA3B-211ENST00000612509 OR11H2Q8NH07 326 aa13.19□□□□□ -0.3
SEMA3B-211ENST00000612509 THAP6Q8TBB0 222 aa13.19□□□□□ -0.3
SEMA3B-211ENST00000612509 CHAC2Q8WUX2 184 aa13.19□□□□□ -0.3
SEMA3B-211ENST00000612509 RARRES2Q99969 163 aa13.19□□□□□ -0.3
SEMA3B-211ENST00000612509 RNF126Q9BV68 326 aa13.19□□□□□ -0.3
SEMA3B-211ENST00000612509 SLC39A9Q9NUM3 307 aa13.19□□□□□ -0.3
SEMA3B-211ENST00000612509 PXMP4Q9Y6I8 212 aa13.19□□□□□ -0.3
SEMA3B-211ENST00000612509 TRAV8-2A0A0B4J237 113 aa13.18□□□□□ -0.3
SEMA3B-211ENST00000612509 FCN2Q15485 313 aa13.18□□□□□ -0.3
SEMA3B-211ENST00000612509 OR1L4Q8NGR5 311 aa13.18□□□□□ -0.3
SEMA3B-211ENST00000612509 IL17DQ8TAD2 202 aa13.18□□□□□ -0.3
SEMA3B-211ENST00000612509 PFDN5Q99471 154 aa13.18□□□□□ -0.3
SEMA3B-211ENST00000612509 RPRMQ9NS64 109 aa13.18□□□□□ -0.3
SEMA3B-211ENST00000612509 HSPB11Q9Y547 144 aa13.18□□□□□ -0.3
SEMA3B-211ENST00000612509 CSMD3Q7Z407 3707 aa13.17□□□□□ -0.3
SEMA3B-211ENST00000612509 F6UB75 175 aa13.17□□□□□ -0.3
SEMA3B-211ENST00000612509 RGS21Q2M5E4 152 aa13.17□□□□□ -0.3
SEMA3B-211ENST00000612509 IGFL4Q6B9Z1 124 aa13.17□□□□□ -0.3
SEMA3B-211ENST00000612509 OR11H7Q8NGC8 314 aa13.17□□□□□ -0.3
SEMA3B-211ENST00000612509 MED28Q9H204 178 aa13.17□□□□□ -0.3
SEMA3B-211ENST00000612509 CLEC5AQ9NY25 188 aa13.17□□□□□ -0.3
SEMA3B-211ENST00000612509 A0A0J9YX75 114 aa13.16□□□□□ -0.3
SEMA3B-211ENST00000612509 CXCL2P19875 107 aa13.16□□□□□ -0.3
SEMA3B-211ENST00000612509 NUTF2P61970 127 aaKnown RBP13.16□□□□□ -0.3
SEMA3B-211ENST00000612509 SPATA31B1PQ5VZV4 182 aa13.16□□□□□ -0.3
SEMA3B-211ENST00000612509 EBLN2Q6P2I7 272 aa13.16□□□□□ -0.3
SEMA3B-211ENST00000612509 BPIFA4PQ86YQ2 179 aa13.16□□□□□ -0.3
SEMA3B-211ENST00000612509 RNF182Q8N6D2 247 aa13.16□□□□□ -0.3
SEMA3B-211ENST00000612509 ATP5SQ99766 215 aa13.16□□□□□ -0.3
SEMA3B-211ENST00000612509 WDR61Q9GZS3 305 aaKnown RBP13.16□□□□□ -0.3
SEMA3B-211ENST00000612509 C11orf68Q9H3H3 251 aaKnown RBP13.16□□□□□ -0.3
SEMA3B-211ENST00000612509 DNAJC4Q9NNZ3 241 aa13.16□□□□□ -0.3
SEMA3B-211ENST00000612509 DYNC2H1Q8NCM8 4307 aaKnown RBP13.15□□□□□ -0.3
SEMA3B-211ENST00000612509 IGKV3-20P01619 116 aa13.15□□□□□ -0.3
SEMA3B-211ENST00000612509 RPL12P30050 165 aaKnown RBP13.15□□□□□ -0.3
SEMA3B-211ENST00000612509 LCN15Q6UWW0 184 aa13.15□□□□□ -0.3
SEMA3B-211ENST00000612509 CSNK1G2-AS1Q8NCQ2 148 aa13.15□□□□□ -0.3
SEMA3B-211ENST00000612509 OR4B1Q8NGF8 309 aa13.15□□□□□ -0.3
SEMA3B-211ENST00000612509 CLUHP3Q96NS8 147 aa13.15□□□□□ -0.3
SEMA3B-211ENST00000612509 C1QTNF4Q9BXJ3 329 aa13.15□□□□□ -0.3
SEMA3B-211ENST00000612509 KCNIP2Q9NS61 270 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms