RNA–Protein interactions for RNA: ENST00000611712.4

LIG4-204, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LIG4, Length 4,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-204ENST00000611712 NEU4Q8WWR8 484 aaPredicted RBP6.98□□□□□ -1.29
LIG4-204ENST00000611712 FXYD5Q96DB9 178 aa6.98□□□□□ -1.29
LIG4-204ENST00000611712 M0R3E3 92 aa6.97□□□□□ -1.29
LIG4-204ENST00000611712 NMUP48645 174 aa6.97□□□□□ -1.29
LIG4-204ENST00000611712 SPANXN1Q5VSR9 72 aa6.97□□□□□ -1.29
LIG4-204ENST00000611712 C22orf34Q6ZV56 151 aa6.97□□□□□ -1.29
LIG4-204ENST00000611712 PRELID3AQ96N28 172 aa6.97□□□□□ -1.29
LIG4-204ENST00000611712 RCHY1Q96PM5 261 aa6.97□□□□□ -1.29
LIG4-204ENST00000611712 E7EUB6 86 aa6.97□□□□□ -1.29
LIG4-204ENST00000611712 NUDT3O95989 172 aa6.97□□□□□ -1.29
LIG4-204ENST00000611712 DLX6P56179 175 aa6.97□□□□□ -1.29
LIG4-204ENST00000611712 RPS20P60866 119 aaKnown RBP6.97□□□□□ -1.29
LIG4-204ENST00000611712 METTL26Q96S19 204 aa6.97□□□□□ -1.29
LIG4-204ENST00000611712 PRSS46E5RG02 174 aa6.97□□□□□ -1.29
LIG4-204ENST00000611712 SNAI2O43623 268 aa6.97□□□□□ -1.29
LIG4-204ENST00000611712 ZNF207O43670 478 aaKnown RBP6.97□□□□□ -1.29
LIG4-204ENST00000611712 TDGF1P3P51864 188 aa6.97□□□□□ -1.29
LIG4-204ENST00000611712 ZNF138P52744 262 aa6.97□□□□□ -1.29
LIG4-204ENST00000611712 ZNF124Q15973 351 aa6.97□□□□□ -1.29
LIG4-204ENST00000611712 Q6AWC8 147 aa6.97□□□□□ -1.29
LIG4-204ENST00000611712 RNF5Q99942 180 aa6.97□□□□□ -1.29
LIG4-204ENST00000611712 KIAA1549Q9HCM3 1950 aa6.97□□□□□ -1.29
LIG4-204ENST00000611712 IGHV3OR16-10A0A075B7F0 116 aa6.96□□□□□ -1.29
LIG4-204ENST00000611712 FAM231DQ6ZW35 169 aa6.96□□□□□ -1.29
LIG4-204ENST00000611712 TMEM116Q8NCL8 245 aa6.96□□□□□ -1.29
LIG4-204ENST00000611712 IGLC7A0M8Q6 106 aa6.96□□□□□ -1.3
LIG4-204ENST00000611712 THBDP07204 575 aa6.96□□□□□ -1.3
LIG4-204ENST00000611712 UQCRFS1P47985 274 aa6.96□□□□□ -1.3
LIG4-204ENST00000611712 THAP8Q8NA92 274 aa6.96□□□□□ -1.3
LIG4-204ENST00000611712 ADAMTS20P59510 1910 aa6.96□□□□□ -1.3
LIG4-204ENST00000611712 C5orf64Q2M2E5 130 aa6.96□□□□□ -1.3
LIG4-204ENST00000611712 PATE2Q6UY27 113 aa6.96□□□□□ -1.3
LIG4-204ENST00000611712 Q86TA4 180 aa6.96□□□□□ -1.3
LIG4-204ENST00000611712 RITA1Q96K30 269 aa6.96□□□□□ -1.3
LIG4-204ENST00000611712 C16orf92Q96LL3 132 aa6.96□□□□□ -1.3
LIG4-204ENST00000611712 KAAG1Q9UBP8 84 aa6.96□□□□□ -1.3
LIG4-204ENST00000611712 PTPRQQ9UMZ3 2332 aa6.96□□□□□ -1.3
LIG4-204ENST00000611712 DYSFO75923 2080 aa6.95□□□□□ -1.3
LIG4-204ENST00000611712 CHCHD1Q96BP2 118 aaKnown RBP6.95□□□□□ -1.3
LIG4-204ENST00000611712 FAM167A-AS1Q96KT0 104 aa6.95□□□□□ -1.3
LIG4-204ENST00000611712 MAP1LC3AQ9H492 121 aa6.95□□□□□ -1.3
LIG4-204ENST00000611712 RAXQ9Y2V3 346 aa6.95□□□□□ -1.3
LIG4-204ENST00000611712 A0A1B0GW15 77 aa6.95□□□□□ -1.3
LIG4-204ENST00000611712 SH2D7A6NKC9 451 aaPredicted RBP6.95□□□□□ -1.3
LIG4-204ENST00000611712 SMIM17P0DL12 118 aa6.95□□□□□ -1.3
LIG4-204ENST00000611712 TDRG1Q3Y452 100 aa6.95□□□□□ -1.3
LIG4-204ENST00000611712 ORMDL3Q8N138 153 aa6.95□□□□□ -1.3
LIG4-204ENST00000611712 FER1L6-AS1Q8NA97 138 aa6.95□□□□□ -1.3
LIG4-204ENST00000611712 C18orf15Q96N68 181 aa6.95□□□□□ -1.3
LIG4-204ENST00000611712 IGKV2-40A0A087WW87 121 aaPredicted RBP6.94□□□□□ -1.3
LIG4-204ENST00000611712 NPIPB5A8MRT5 1133 aa6.94□□□□□ -1.3
LIG4-204ENST00000611712 IGKV2D-40P01614 121 aaPredicted RBP6.94□□□□□ -1.3
LIG4-204ENST00000611712 RAB9AP51151 201 aa6.94□□□□□ -1.3
LIG4-204ENST00000611712 IGF2-ASQ6U949 168 aa6.94□□□□□ -1.3
LIG4-204ENST00000611712 CLEC19AQ6UXS0 136 aa6.94□□□□□ -1.3
LIG4-204ENST00000611712 WFDC3Q8IUB2 231 aa6.94□□□□□ -1.3
LIG4-204ENST00000611712 ZNF503Q96F45 646 aa6.94□□□□□ -1.3
LIG4-204ENST00000611712 ALKBH7Q9BT30 221 aaPredicted RBP6.94□□□□□ -1.3
LIG4-204ENST00000611712 MRPL36Q9P0J6 103 aaKnown RBP6.94□□□□□ -1.3
LIG4-204ENST00000611712 XIRP2A4UGR9 3374 aa6.94□□□□□ -1.3
LIG4-204ENST00000611712 SHISA9B4DS77 424 aa6.94□□□□□ -1.3
LIG4-204ENST00000611712 TMEM97Q5BJF2 176 aa6.94□□□□□ -1.3
LIG4-204ENST00000611712 TEX43Q6ZNM6 134 aa6.94□□□□□ -1.3
LIG4-204ENST00000611712 ERASQ7Z444 233 aa6.94□□□□□ -1.3
LIG4-204ENST00000611712 SHANK2-AS3Q9BTD1 123 aa6.94□□□□□ -1.3
LIG4-204ENST00000611712 MCRIP2Q9BUT9 160 aaKnown RBP6.94□□□□□ -1.3
LIG4-204ENST00000611712 CEP295Q9C0D2 2601 aa6.94□□□□□ -1.3
LIG4-204ENST00000611712 A6NDN8 102 aa6.94□□□□□ -1.3
LIG4-204ENST00000611712 DLEU1O43261 78 aa6.94□□□□□ -1.3
LIG4-204ENST00000611712 IGLC1P0CG04 106 aa6.94□□□□□ -1.3
LIG4-204ENST00000611712 VMO1Q7Z5L0 202 aa6.94□□□□□ -1.3
LIG4-204ENST00000611712 Q8N7P7 452 aa6.94□□□□□ -1.3
LIG4-204ENST00000611712 SMIM12Q96EX1 92 aa6.94□□□□□ -1.3
LIG4-204ENST00000611712 ZNF414Q96IQ9 312 aa6.94□□□□□ -1.3
LIG4-204ENST00000611712 NAV3Q8IVL0 2385 aa6.94□□□□□ -1.3
LIG4-204ENST00000611712 C22orf46C9J442 243 aa6.94□□□□□ -1.3
LIG4-204ENST00000611712 RHOGP84095 191 aa6.94□□□□□ -1.3
LIG4-204ENST00000611712 PRSS33Q8NF86 280 aa6.94□□□□□ -1.3
LIG4-204ENST00000611712 MYOZ3Q8TDC0 251 aa6.94□□□□□ -1.3
LIG4-204ENST00000611712 EEF1AKMT3Q96AZ1 226 aa6.94□□□□□ -1.3
LIG4-204ENST00000611712 CUL9Q8IWT3 2517 aa6.93□□□□□ -1.3
LIG4-204ENST00000611712 KIR2DL5BA0A0G2JN68 375 aa6.93□□□□□ -1.3
LIG4-204ENST00000611712 KIR2DL5BA0A0G2JPC4 375 aa6.93□□□□□ -1.3
LIG4-204ENST00000611712 hDV102S1A0JD36 115 aa6.93□□□□□ -1.3
LIG4-204ENST00000611712 F5H697 171 aa6.93□□□□□ -1.3
LIG4-204ENST00000611712 ARMS2P0C7Q2 107 aa6.93□□□□□ -1.3
LIG4-204ENST00000611712 PF4V1P10720 104 aa6.93□□□□□ -1.3
LIG4-204ENST00000611712 ATP5G2Q06055 141 aa6.93□□□□□ -1.3
LIG4-204ENST00000611712 PSG3Q16557 428 aa6.93□□□□□ -1.3
LIG4-204ENST00000611712 IGFL4Q6B9Z1 124 aa6.93□□□□□ -1.3
LIG4-204ENST00000611712 SP5Q6BEB4 398 aaPredicted RBP6.93□□□□□ -1.3
LIG4-204ENST00000611712 KIR2DL5AQ8N109 375 aa6.93□□□□□ -1.3
LIG4-204ENST00000611712 TMEM208Q9BTX3 173 aa6.93□□□□□ -1.3
LIG4-204ENST00000611712 PPIFP30405 207 aaKnown RBP6.93□□□□□ -1.3
LIG4-204ENST00000611712 PET117Q6UWS5 81 aa6.93□□□□□ -1.3
LIG4-204ENST00000611712 C8orf31Q8N9H6 132 aa6.93□□□□□ -1.3
LIG4-204ENST00000611712 Q8TAT8 98 aa6.93□□□□□ -1.3
LIG4-204ENST00000611712 ZNF492Q9P255 531 aa6.93□□□□□ -1.3
LIG4-204ENST00000611712 LOC102724200A0A096LPH7 203 aaPredicted RBP6.93□□□□□ -1.3
LIG4-204ENST00000611712 FABP5P3A8MUU1 101 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms