RNA–Protein interactions for RNA: ENST00000602029.1

VRK3-226, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 578 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-226ENST00000602029 CACNG8Q8WXS5 425 aa3.92□□□□□ -1.78
VRK3-226ENST00000602029 BSCL2Q96G97 398 aaPredicted RBP3.92□□□□□ -1.78
VRK3-226ENST00000602029 RBKSQ9H477 322 aa3.92□□□□□ -1.78
VRK3-226ENST00000602029 SDF2L1Q9HCN8 221 aa3.92□□□□□ -1.78
VRK3-226ENST00000602029 SLC39A9Q9NUM3 307 aa3.92□□□□□ -1.78
VRK3-226ENST00000602029 FKBP11Q9NYL4 201 aa3.92□□□□□ -1.78
VRK3-226ENST00000602029 TECRQ9NZ01 308 aaKnown RBP3.92□□□□□ -1.78
VRK3-226ENST00000602029 FBXL7Q9UJT9 491 aa3.92□□□□□ -1.78
VRK3-226ENST00000602029 ZNF257Q9Y2Q1 563 aa3.92□□□□□ -1.78
VRK3-226ENST00000602029 LY96Q9Y6Y9 160 aa3.92□□□□□ -1.78
VRK3-226ENST00000602029 DNAH2Q9P225 4427 aa3.92□□□□□ -1.78
VRK3-226ENST00000602029 IGHV3-35A0A0C4DH35 117 aa3.91□□□□□ -1.78
VRK3-226ENST00000602029 C2orf70A6NJV1 201 aa3.91□□□□□ -1.78
VRK3-226ENST00000602029 PMS2P5A8MQ11 134 aa3.91□□□□□ -1.78
VRK3-226ENST00000602029 INS-IGF2F8WCM5 200 aa3.91□□□□□ -1.78
VRK3-226ENST00000602029 LCE2BO14633 110 aa3.91□□□□□ -1.78
VRK3-226ENST00000602029 TNFSF12O43508 249 aa3.91□□□□□ -1.78
VRK3-226ENST00000602029 SPRY2O43597 315 aa3.91□□□□□ -1.78
VRK3-226ENST00000602029 FCGR3BO75015 233 aa3.91□□□□□ -1.78
VRK3-226ENST00000602029 MT-CO2P00403 227 aa3.91□□□□□ -1.78
VRK3-226ENST00000602029 HRASP01112 189 aa3.91□□□□□ -1.78
VRK3-226ENST00000602029 METTL15P1P0C7V9 234 aa3.91□□□□□ -1.78
VRK3-226ENST00000602029 RPL35AP18077 110 aaKnown RBP3.91□□□□□ -1.78
VRK3-226ENST00000602029 HOXA5P20719 270 aa3.91□□□□□ -1.78
VRK3-226ENST00000602029 DUTP33316 252 aaKnown RBP3.91□□□□□ -1.78
VRK3-226ENST00000602029 OPRK1P41145 380 aa3.91□□□□□ -1.78
VRK3-226ENST00000602029 FAM3BP58499 235 aaPredicted RBP3.91□□□□□ -1.78
VRK3-226ENST00000602029 B2MP61769 119 aa3.91□□□□□ -1.78
VRK3-226ENST00000602029 SNRPEP62304 92 aaKnown RBP3.91□□□□□ -1.78
VRK3-226ENST00000602029 RPL19P84098 196 aaKnown RBP3.91□□□□□ -1.78
VRK3-226ENST00000602029 FABP9Q0Z7S8 132 aa3.91□□□□□ -1.78
VRK3-226ENST00000602029 RAB31Q13636 194 aa3.91□□□□□ -1.78
VRK3-226ENST00000602029 TMEM241Q24JQ0 296 aa3.91□□□□□ -1.78
VRK3-226ENST00000602029 DEFB114Q30KQ6 69 aa3.91□□□□□ -1.78
VRK3-226ENST00000602029 COA6Q5JTJ3 125 aaKnown RBP3.91□□□□□ -1.78
VRK3-226ENST00000602029 SPANXN5Q5MJ07 72 aa3.91□□□□□ -1.78
VRK3-226ENST00000602029 C10orf55Q5SWW7 151 aa3.91□□□□□ -1.78
VRK3-226ENST00000602029 KCNIP4Q6PIL6 250 aa3.91□□□□□ -1.78
VRK3-226ENST00000602029 CLEC19AQ6UXS0 136 aa3.91□□□□□ -1.78
VRK3-226ENST00000602029 Q6ZRM9 215 aa3.91□□□□□ -1.78
VRK3-226ENST00000602029 RPP25LQ8N5L8 163 aaKnown RBP3.91□□□□□ -1.78
VRK3-226ENST00000602029 FAM24BQ8N5W8 94 aa3.91□□□□□ -1.78
VRK3-226ENST00000602029 STPG3Q8N7X2 389 aa3.91□□□□□ -1.78
VRK3-226ENST00000602029 NECAP1Q8NC96 275 aa3.91□□□□□ -1.78
VRK3-226ENST00000602029 OR1L6Q8NGR2 347 aa3.91□□□□□ -1.78
VRK3-226ENST00000602029 EEF1AKMT3Q96AZ1 226 aa3.91□□□□□ -1.78
VRK3-226ENST00000602029 ACY3Q96HD9 319 aa3.91□□□□□ -1.78
VRK3-226ENST00000602029 PYGO2Q9BRQ0 406 aa3.91□□□□□ -1.78
VRK3-226ENST00000602029 NPCDR1Q9BY65 106 aa3.91□□□□□ -1.78
VRK3-226ENST00000602029 KRTAP4-5Q9BYR2 181 aa3.91□□□□□ -1.78
VRK3-226ENST00000602029 OR51M1Q9H341 326 aa3.91□□□□□ -1.78
VRK3-226ENST00000602029 DOK5Q9P104 306 aa3.91□□□□□ -1.78
VRK3-226ENST00000602029 GNG13Q9P2W3 67 aa3.91□□□□□ -1.78
VRK3-226ENST00000602029 WDR83OSQ9Y284 106 aa3.91□□□□□ -1.78
VRK3-226ENST00000602029 PUS1Q9Y606 427 aaKnown RBP eCLIP3.91□□□□□ -1.78
VRK3-226ENST00000602029 UBE2L5PA0A1B0GUS4 154 aa3.9□□□□□ -1.79
VRK3-226ENST00000602029 C15orf61A6NNL5 157 aa3.9□□□□□ -1.79
VRK3-226ENST00000602029 ZNF785A8K8V0 405 aa3.9□□□□□ -1.79
VRK3-226ENST00000602029 ZNF727A8MUV8 499 aa3.9□□□□□ -1.79
VRK3-226ENST00000602029 EIF3GO75821 320 aaKnown RBP eCLIP3.9□□□□□ -1.79
VRK3-226ENST00000602029 S1PR2O95136 353 aa3.9□□□□□ -1.79
VRK3-226ENST00000602029 TYMSP04818 313 aa3.9□□□□□ -1.79
VRK3-226ENST00000602029 REG1AP05451 166 aa3.9□□□□□ -1.79
VRK3-226ENST00000602029 SAA1P0DJI8 122 aaPredicted RBP3.9□□□□□ -1.79
VRK3-226ENST00000602029 IAPPP10997 89 aa3.9□□□□□ -1.79
VRK3-226ENST00000602029 EDN2P20800 178 aa3.9□□□□□ -1.79
VRK3-226ENST00000602029 FGF7P21781 194 aa3.9□□□□□ -1.79
VRK3-226ENST00000602029 S100A2P29034 98 aa3.9□□□□□ -1.79
VRK3-226ENST00000602029 RPL35P42766 123 aaKnown RBP3.9□□□□□ -1.79
VRK3-226ENST00000602029 CDC34P49427 236 aaPredicted RBP3.9□□□□□ -1.79
VRK3-226ENST00000602029 CCL20P78556 96 aa3.9□□□□□ -1.79
VRK3-226ENST00000602029 PRSS8Q16651 343 aa3.9□□□□□ -1.79
VRK3-226ENST00000602029 BSXQ3C1V8 233 aa3.9□□□□□ -1.79
VRK3-226ENST00000602029 COX19Q49B96 90 aa3.9□□□□□ -1.79
VRK3-226ENST00000602029 TM4SF20Q53R12 229 aa3.9□□□□□ -1.79
VRK3-226ENST00000602029 TMEM177Q53S58 311 aa3.9□□□□□ -1.79
VRK3-226ENST00000602029 FAM209BQ5JX69 171 aa3.9□□□□□ -1.79
VRK3-226ENST00000602029 OR4A47Q6IF82 309 aa3.9□□□□□ -1.79
VRK3-226ENST00000602029 CEMP1Q6PRD7 247 aaPredicted RBP3.9□□□□□ -1.79
VRK3-226ENST00000602029 MMD2Q8IY49 270 aa3.9□□□□□ -1.79
VRK3-226ENST00000602029 TMEM61Q8N0U2 210 aa3.9□□□□□ -1.79
VRK3-226ENST00000602029 TEX45Q8NA69 505 aa3.9□□□□□ -1.79
VRK3-226ENST00000602029 OR10G9Q8NGN4 311 aa3.9□□□□□ -1.79
VRK3-226ENST00000602029 OR10G7Q8NGN6 311 aa3.9□□□□□ -1.79
VRK3-226ENST00000602029 OR5B3Q8NH48 314 aa3.9□□□□□ -1.79
VRK3-226ENST00000602029 OR4A16Q8NH70 328 aa3.9□□□□□ -1.79
VRK3-226ENST00000602029 Q8WTZ3 238 aa3.9□□□□□ -1.79
VRK3-226ENST00000602029 SLC35E1Q96K37 410 aa3.9□□□□□ -1.79
VRK3-226ENST00000602029 RNF2Q99496 336 aa3.9□□□□□ -1.79
VRK3-226ENST00000602029 RARRES2Q99969 163 aa3.9□□□□□ -1.79
VRK3-226ENST00000602029 SMIM7Q9BQ49 75 aa3.9□□□□□ -1.79
VRK3-226ENST00000602029 OVOL2Q9BRP0 275 aa3.9□□□□□ -1.79
VRK3-226ENST00000602029 RSG1Q9BU20 258 aa3.9□□□□□ -1.79
VRK3-226ENST00000602029 C20orf24Q9BUV8 137 aa3.9□□□□□ -1.79
VRK3-226ENST00000602029 ZNF430Q9H8G1 570 aaPredicted RBP3.9□□□□□ -1.79
VRK3-226ENST00000602029 NPVFQ9HCQ7 196 aa3.9□□□□□ -1.79
VRK3-226ENST00000602029 PRNDQ9UKY0 176 aa3.9□□□□□ -1.79
VRK3-226ENST00000602029 IGKV3-7A0A075B6H7 116 aa3.89□□□□□ -1.79
VRK3-226ENST00000602029 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.89□□□□□ -1.79
VRK3-226ENST00000602029 A0A1W2PPV4 95 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms