RNA–Protein interactions for RNA: ENST00000601981.5

UPF1-213, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 5

Gene UPF1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-213ENST00000601981 PAGE4O60829 102 aa7.75□□□□□ -1.17
UPF1-213ENST00000601981 HYPMO75409 117 aa7.75□□□□□ -1.17
UPF1-213ENST00000601981 TOMM40O96008 361 aa7.75□□□□□ -1.17
UPF1-213ENST00000601981 ARL3P36405 182 aa7.75□□□□□ -1.17
UPF1-213ENST00000601981 YPEL3P61236 119 aaPredicted RBP7.75□□□□□ -1.17
UPF1-213ENST00000601981 TIGITQ495A1 244 aa7.75□□□□□ -1.17
UPF1-213ENST00000601981 Q56UQ5 140 aa7.75□□□□□ -1.17
UPF1-213ENST00000601981 FAM90A2PQ658T7 463 aa7.75□□□□□ -1.17
UPF1-213ENST00000601981 ATRAIDQ6UW56 229 aa7.75□□□□□ -1.17
UPF1-213ENST00000601981 CLEC19AQ6UXS0 136 aa7.75□□□□□ -1.17
UPF1-213ENST00000601981 CLRN3Q8NCR9 226 aa7.75□□□□□ -1.17
UPF1-213ENST00000601981 ZNF502Q8TBZ5 544 aa7.75□□□□□ -1.17
UPF1-213ENST00000601981 DOK5Q9P104 306 aa7.75□□□□□ -1.17
UPF1-213ENST00000601981 MEGF8Q7Z7M0 2845 aa7.74□□□□□ -1.17
UPF1-213ENST00000601981 C11orf94C9JXX5 98 aa7.74□□□□□ -1.17
UPF1-213ENST00000601981 F6UZH7 168 aa7.74□□□□□ -1.17
UPF1-213ENST00000601981 F8W735 103 aaPredicted RBP7.74□□□□□ -1.17
UPF1-213ENST00000601981 NUPL2O15504 423 aaKnown RBP7.74□□□□□ -1.17
UPF1-213ENST00000601981 GNG7O60262 68 aa7.74□□□□□ -1.17
UPF1-213ENST00000601981 OR7C2O60412 319 aa7.74□□□□□ -1.17
UPF1-213ENST00000601981 GGCTO75223 188 aaKnown RBP7.74□□□□□ -1.17
UPF1-213ENST00000601981 IGHV3-23P01764 117 aa7.74□□□□□ -1.17
UPF1-213ENST00000601981 CLEC3BP05452 202 aa7.74□□□□□ -1.17
UPF1-213ENST00000601981 RD3LP0DJH9 198 aa7.74□□□□□ -1.17
UPF1-213ENST00000601981 PSG1P11464 419 aa7.74□□□□□ -1.17
UPF1-213ENST00000601981 GPR183P32249 361 aa7.74□□□□□ -1.17
UPF1-213ENST00000601981 LINC00482Q8N8I6 264 aa7.74□□□□□ -1.17
UPF1-213ENST00000601981 STXBP6Q8NFX7 210 aa7.74□□□□□ -1.17
UPF1-213ENST00000601981 OR51G1Q8NGK1 321 aa7.74□□□□□ -1.17
UPF1-213ENST00000601981 OR1B1Q8NGR6 318 aa7.74□□□□□ -1.17
UPF1-213ENST00000601981 ZNF503Q96F45 646 aa7.74□□□□□ -1.17
UPF1-213ENST00000601981 FAM167A-AS1Q96KT0 104 aa7.74□□□□□ -1.17
UPF1-213ENST00000601981 CCDC140Q96MF4 163 aa7.74□□□□□ -1.17
UPF1-213ENST00000601981 DUX3Q96PT4 197 aa7.74□□□□□ -1.17
UPF1-213ENST00000601981 SLC25A2Q9BXI2 301 aa7.74□□□□□ -1.17
UPF1-213ENST00000601981 HIGD1AQ9Y241 93 aa7.74□□□□□ -1.17
UPF1-213ENST00000601981 FAM74A7A6NL05 159 aa7.73□□□□□ -1.17
UPF1-213ENST00000601981 OVOL1O14753 267 aa7.73□□□□□ -1.17
UPF1-213ENST00000601981 TGOLN2O43493 480 aa7.73□□□□□ -1.17
UPF1-213ENST00000601981 ORM2P19652 201 aa7.73□□□□□ -1.17
UPF1-213ENST00000601981 HOXD3P31249 432 aaPredicted RBP7.73□□□□□ -1.17
UPF1-213ENST00000601981 CEBPGP53567 150 aa7.73□□□□□ -1.17
UPF1-213ENST00000601981 UBE2G2P60604 165 aa7.73□□□□□ -1.17
UPF1-213ENST00000601981 LYZP61626 148 aa7.73□□□□□ -1.17
UPF1-213ENST00000601981 RELQ04864 619 aaPredicted RBP7.73□□□□□ -1.17
UPF1-213ENST00000601981 RHEBQ15382 184 aa7.73□□□□□ -1.17
UPF1-213ENST00000601981 FAM106AQ4KMX7 169 aa7.73□□□□□ -1.17
UPF1-213ENST00000601981 FAM74A3Q4VXF1 159 aa7.73□□□□□ -1.17
UPF1-213ENST00000601981 LINC00305Q7Z4B0 112 aa7.73□□□□□ -1.17
UPF1-213ENST00000601981 S100A7AQ86SG5 101 aa7.73□□□□□ -1.17
UPF1-213ENST00000601981 C1QL4Q86Z23 238 aa7.73□□□□□ -1.17
UPF1-213ENST00000601981 NIPSNAP3BQ9BS92 247 aa7.73□□□□□ -1.17
UPF1-213ENST00000601981 ELOVL1Q9BW60 279 aa7.73□□□□□ -1.17
UPF1-213ENST00000601981 PEMTQ9UBM1 199 aa7.73□□□□□ -1.17
UPF1-213ENST00000601981 S4R3C0 116 aa7.73□□□□□ -1.17
UPF1-213ENST00000601981 TRRAPQ9Y4A5 3859 aa7.73□□□□□ -1.17
UPF1-213ENST00000601981 PKD1L1Q8TDX9 2849 aa7.72□□□□□ -1.17
UPF1-213ENST00000601981 A0A1W2PRE2 83 aa7.72□□□□□ -1.17
UPF1-213ENST00000601981 WI2-2373I1.2A0A1W2PRP0 233 aa7.72□□□□□ -1.17
UPF1-213ENST00000601981 OR2T8A6NH00 312 aa7.72□□□□□ -1.17
UPF1-213ENST00000601981 PPP5D1E7EU14 171 aa7.72□□□□□ -1.17
UPF1-213ENST00000601981 H3BQ15 152 aa7.72□□□□□ -1.17
UPF1-213ENST00000601981 BMPR1BO00238 502 aa7.72□□□□□ -1.17
UPF1-213ENST00000601981 OR2C1O95371 312 aa7.72□□□□□ -1.17
UPF1-213ENST00000601981 ATP5G3P48201 142 aa7.72□□□□□ -1.17
UPF1-213ENST00000601981 SLURP1P55000 103 aa7.72□□□□□ -1.17
UPF1-213ENST00000601981 UBE2L3P68036 154 aaKnown RBP7.72□□□□□ -1.17
UPF1-213ENST00000601981 PNRC1Q12796 327 aaPredicted RBP7.72□□□□□ -1.17
UPF1-213ENST00000601981 MORN5Q5VZ52 161 aa7.72□□□□□ -1.17
UPF1-213ENST00000601981 CST9LP1Q5W188 147 aa7.72□□□□□ -1.17
UPF1-213ENST00000601981 WFDC9Q8NEX5 89 aa7.72□□□□□ -1.17
UPF1-213ENST00000601981 Q8WTZ3 238 aa7.72□□□□□ -1.17
UPF1-213ENST00000601981 C11orf52Q96A22 123 aa7.72□□□□□ -1.17
UPF1-213ENST00000601981 RNF125Q96EQ8 232 aa7.72□□□□□ -1.17
UPF1-213ENST00000601981 TVP23CQ96ET8 276 aa7.72□□□□□ -1.17
UPF1-213ENST00000601981 UHRF2Q96PU4 802 aa7.72□□□□□ -1.17
UPF1-213ENST00000601981 PAXXQ9BUH6 204 aa7.72□□□□□ -1.17
UPF1-213ENST00000601981 OR51M1Q9H341 326 aa7.72□□□□□ -1.17
UPF1-213ENST00000601981 MRPL27Q9P0M9 148 aaKnown RBP7.72□□□□□ -1.17
UPF1-213ENST00000601981 YTHDF2Q9Y5A9 579 aaKnown RBP7.72□□□□□ -1.17
UPF1-213ENST00000601981 PUS1Q9Y606 427 aaKnown RBP eCLIP7.72□□□□□ -1.17
UPF1-213ENST00000601981 VWFP04275 2813 aa7.71□□□□□ -1.17
UPF1-213ENST00000601981 NOTCH3Q9UM47 2321 aa7.71□□□□□ -1.18
UPF1-213ENST00000601981 TRAV5A0A0B4J249 113 aa7.71□□□□□ -1.18
UPF1-213ENST00000601981 ZNF727A8MUV8 499 aa7.71□□□□□ -1.18
UPF1-213ENST00000601981 H3BRN7 92 aa7.71□□□□□ -1.18
UPF1-213ENST00000601981 M0R036 132 aa7.71□□□□□ -1.18
UPF1-213ENST00000601981 DNASE2O00115 360 aaPredicted RBP7.71□□□□□ -1.18
UPF1-213ENST00000601981 TRBV12-3P01733 135 aa7.71□□□□□ -1.18
UPF1-213ENST00000601981 INSL3P51460 131 aa7.71□□□□□ -1.18
UPF1-213ENST00000601981 BTN1A1Q13410 526 aa7.71□□□□□ -1.18
UPF1-213ENST00000601981 C9orf66Q5T8R8 295 aa7.71□□□□□ -1.18
UPF1-213ENST00000601981 GPHB5Q86YW7 130 aa7.71□□□□□ -1.18
UPF1-213ENST00000601981 TMEM190Q8WZ59 177 aa7.71□□□□□ -1.18
UPF1-213ENST00000601981 DLX4Q92988 240 aaPredicted RBP7.71□□□□□ -1.18
UPF1-213ENST00000601981 SMIM7Q9BQ49 75 aa7.71□□□□□ -1.18
UPF1-213ENST00000601981 SLC25A39Q9BZJ4 359 aaPredicted RBP7.71□□□□□ -1.18
UPF1-213ENST00000601981 PARLQ9H300 379 aa7.71□□□□□ -1.18
UPF1-213ENST00000601981 TMEM14CQ9P0S9 112 aa7.71□□□□□ -1.18
UPF1-213ENST00000601981 ZMAT5Q9UDW3 170 aaKnown RBP7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 121.3 ms