RNA–Protein interactions for RNA: ENST00000600948.5

PLD3-223, Transcript of phospholipase D family member 3, human

TSL 2

Gene PLD3, Length 536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PLD3-223	ENST00000600948	NUTF2	P61970	127 aa	Known RBP	11.23	□□□□□ -0.61
PLD3-223	ENST00000600948	CEMP1	Q6PRD7	247 aa	Predicted RBP	11.23	□□□□□ -0.61
PLD3-223	ENST00000600948	PATE2	Q6UY27	113 aa		11.23	□□□□□ -0.61
PLD3-223	ENST00000600948	ZNF546	Q86UE3	836 aa		11.23	□□□□□ -0.61
PLD3-223	ENST00000600948	C16orf92	Q96LL3	132 aa		11.23	□□□□□ -0.61
PLD3-223	ENST00000600948	C20orf173	Q96LM9	149 aa		11.23	□□□□□ -0.61
PLD3-223	ENST00000600948	UHRF2	Q96PU4	802 aa		11.23	□□□□□ -0.61
PLD3-223	ENST00000600948	C1QTNF4	Q9BXJ3	329 aa		11.23	□□□□□ -0.61
PLD3-223	ENST00000600948	ARL6	Q9H0F7	186 aa		11.23	□□□□□ -0.61
PLD3-223	ENST00000600948	GPN1	Q9HCN4	374 aa	Predicted RBP	11.23	□□□□□ -0.61
PLD3-223	ENST00000600948	IGHV4-28	A0A0C4DH34	117 aa		11.22	□□□□□ -0.61
PLD3-223	ENST00000600948	AGPAT2	O15120	278 aa		11.22	□□□□□ -0.61
PLD3-223	ENST00000600948	PRAF2	O60831	178 aa		11.22	□□□□□ -0.61
PLD3-223	ENST00000600948	CST7	O76096	145 aa		11.22	□□□□□ -0.61
PLD3-223	ENST00000600948	RBMY1A1	P0DJD3	496 aa	Known RBP	11.22	□□□□□ -0.61
PLD3-223	ENST00000600948	RBMY1C	P0DJD4	496 aa		11.22	□□□□□ -0.61
PLD3-223	ENST00000600948	MIF	P14174	115 aa		11.22	□□□□□ -0.61
PLD3-223	ENST00000600948	PVALB	P20472	110 aa	Predicted RBP	11.22	□□□□□ -0.61
PLD3-223	ENST00000600948	RBMY1F	Q15415	496 aa	Known RBP	11.22	□□□□□ -0.61
PLD3-223	ENST00000600948	CLUHP3	Q96NS8	147 aa		11.22	□□□□□ -0.61
PLD3-223	ENST00000600948	MGST2	Q99735	147 aa		11.22	□□□□□ -0.61
PLD3-223	ENST00000600948	LYRM2	Q9NU23	88 aa	Predicted RBP	11.22	□□□□□ -0.61
PLD3-223	ENST00000600948	XCL2	Q9UBD3	114 aa		11.22	□□□□□ -0.61
PLD3-223	ENST00000600948		A0A0J9YX75	114 aa		11.21	□□□□□ -0.61
PLD3-223	ENST00000600948	IGSF23	A1L1A6	192 aa		11.21	□□□□□ -0.61
PLD3-223	ENST00000600948		F6UB75	175 aa		11.21	□□□□□ -0.61
PLD3-223	ENST00000600948	INMT-MINDY4	F8WBC2	141 aa		11.21	□□□□□ -0.61
PLD3-223	ENST00000600948	GOSR2	O14653	212 aa		11.21	□□□□□ -0.61
PLD3-223	ENST00000600948	IGKV3-20	P01619	116 aa		11.21	□□□□□ -0.61
PLD3-223	ENST00000600948	RPL7	P18124	248 aa	Known RBP	11.21	□□□□□ -0.61
PLD3-223	ENST00000600948	NANOS2	P60321	138 aa	Known RBP	11.21	□□□□□ -0.61
PLD3-223	ENST00000600948	PXDC1	Q5TGL8	231 aa		11.21	□□□□□ -0.61
PLD3-223	ENST00000600948	SPATA31B1P	Q5VZV4	182 aa		11.21	□□□□□ -0.61
PLD3-223	ENST00000600948	TMEM252	Q8N6L7	170 aa		11.21	□□□□□ -0.61
PLD3-223	ENST00000600948	C11orf45	Q8TAV5	145 aa		11.21	□□□□□ -0.61
PLD3-223	ENST00000600948	PHLDA1	Q8WV24	401 aa	Predicted RBP	11.21	□□□□□ -0.61
PLD3-223	ENST00000600948	MARVELD1	Q9BSK0	173 aa		11.21	□□□□□ -0.61
PLD3-223	ENST00000600948	ARV1	Q9H2C2	271 aa		11.21	□□□□□ -0.61
PLD3-223	ENST00000600948	RPRM	Q9NS64	109 aa		11.21	□□□□□ -0.61
PLD3-223	ENST00000600948	TRAV8-2	A0A0B4J237	113 aa		11.2	□□□□□ -0.62
PLD3-223	ENST00000600948		A8MTW9	85 aa		11.2	□□□□□ -0.62
PLD3-223	ENST00000600948	SIX6	O95475	246 aa		11.2	□□□□□ -0.62
PLD3-223	ENST00000600948	SULT1A1	P50225	295 aa		11.2	□□□□□ -0.62
PLD3-223	ENST00000600948	VWC2	Q2TAL6	325 aa		11.2	□□□□□ -0.62
PLD3-223	ENST00000600948	S100A7A	Q86SG5	101 aa		11.2	□□□□□ -0.62
PLD3-223	ENST00000600948	ZNF709	Q8N972	641 aa		11.2	□□□□□ -0.62
PLD3-223	ENST00000600948	MFF	Q9GZY8	342 aa		11.2	□□□□□ -0.62
PLD3-223	ENST00000600948	UQCC1	Q9NVA1	299 aa		11.2	□□□□□ -0.62
PLD3-223	ENST00000600948	WDR83OS	Q9Y284	106 aa		11.2	□□□□□ -0.62
PLD3-223	ENST00000600948		A0A087X0K7	114 aa		11.19	□□□□□ -0.62
PLD3-223	ENST00000600948	MRPS12	O15235	138 aa	Known RBP	11.19	□□□□□ -0.62
PLD3-223	ENST00000600948	CAMLG	P49069	296 aa		11.19	□□□□□ -0.62
PLD3-223	ENST00000600948	FXYD7	P58549	80 aa		11.19	□□□□□ -0.62
PLD3-223	ENST00000600948	FAM78B	Q5VT40	261 aa		11.19	□□□□□ -0.62
PLD3-223	ENST00000600948	EBLN2	Q6P2I7	272 aa		11.19	□□□□□ -0.62
PLD3-223	ENST00000600948	OR4B1	Q8NGF8	309 aa		11.19	□□□□□ -0.62
PLD3-223	ENST00000600948	SLC35B3	Q9H1N7	401 aa		11.19	□□□□□ -0.62
PLD3-223	ENST00000600948	ALMS1	Q8TCU4	4167 aa		11.19	□□□□□ -0.62
PLD3-223	ENST00000600948	ELOA3C	A0A087WX78	387 aa	Predicted RBP	11.18	□□□□□ -0.62
PLD3-223	ENST00000600948	S100A11	P31949	105 aa		11.18	□□□□□ -0.62
PLD3-223	ENST00000600948	DEFA1	P59665	94 aa		11.18	□□□□□ -0.62
PLD3-223	ENST00000600948	DEFA3	P59666	94 aa		11.18	□□□□□ -0.62
PLD3-223	ENST00000600948	FGL1	Q08830	312 aa		11.18	□□□□□ -0.62
PLD3-223	ENST00000600948	IGFL4	Q6B9Z1	124 aa		11.18	□□□□□ -0.62
PLD3-223	ENST00000600948	ZNF705A	Q6ZN79	300 aa	Predicted RBP	11.18	□□□□□ -0.62
PLD3-223	ENST00000600948	STX12	Q86Y82	276 aa		11.18	□□□□□ -0.62
PLD3-223	ENST00000600948	TMEM37	Q8WXS4	190 aa		11.18	□□□□□ -0.62
PLD3-223	ENST00000600948	NMES1	Q9C002	83 aa		11.18	□□□□□ -0.62
PLD3-223	ENST00000600948	HRH4	Q9H3N8	390 aa		11.18	□□□□□ -0.62
PLD3-223	ENST00000600948	KLK5	Q9Y337	293 aa	Predicted RBP	11.18	□□□□□ -0.62
PLD3-223	ENST00000600948	PLEC	Q15149	4684 aa	Known RBP	11.18	□□□□□ -0.62
PLD3-223	ENST00000600948	UBE2L5P	A0A1B0GUS4	154 aa		11.17	□□□□□ -0.62
PLD3-223	ENST00000600948	ZNF705F	A8MVS1	300 aa	Predicted RBP	11.17	□□□□□ -0.62
PLD3-223	ENST00000600948	COX7A2P2	O60397	106 aa		11.17	□□□□□ -0.62
PLD3-223	ENST00000600948	ZNF705D	P0CH99	300 aa	Predicted RBP	11.17	□□□□□ -0.62
PLD3-223	ENST00000600948	ZNF705B	P0CI00	300 aa	Predicted RBP	11.17	□□□□□ -0.62
PLD3-223	ENST00000600948	HBG1	P69891	147 aa		11.17	□□□□□ -0.62
PLD3-223	ENST00000600948	HBG2	P69892	147 aa		11.17	□□□□□ -0.62
PLD3-223	ENST00000600948	PRR20E	P86478	221 aa		11.17	□□□□□ -0.62
PLD3-223	ENST00000600948	PRR20C	P86479	221 aa		11.17	□□□□□ -0.62
PLD3-223	ENST00000600948	PRR20D	P86480	221 aa		11.17	□□□□□ -0.62
PLD3-223	ENST00000600948	PRR20B	P86481	221 aa		11.17	□□□□□ -0.62
PLD3-223	ENST00000600948	PRR20A	P86496	221 aa		11.17	□□□□□ -0.62
PLD3-223	ENST00000600948	PSG9	Q00887	426 aa		11.17	□□□□□ -0.62
PLD3-223	ENST00000600948	RAB31	Q13636	194 aa		11.17	□□□□□ -0.62
PLD3-223	ENST00000600948	MORN5	Q5VZ52	161 aa		11.17	□□□□□ -0.62
PLD3-223	ENST00000600948	MIC13	Q5XKP0	118 aa		11.17	□□□□□ -0.62
PLD3-223	ENST00000600948	AMTN	Q6UX39	209 aa		11.17	□□□□□ -0.62
PLD3-223	ENST00000600948	LINC00305	Q7Z4B0	112 aa		11.17	□□□□□ -0.62
PLD3-223	ENST00000600948	RNF182	Q8N6D2	247 aa		11.17	□□□□□ -0.62
PLD3-223	ENST00000600948	LINC00476	Q8WZB0	136 aa		11.17	□□□□□ -0.62
PLD3-223	ENST00000600948	NEU1	Q99519	415 aa		11.17	□□□□□ -0.62
PLD3-223	ENST00000600948	RNF24	Q9Y225	148 aa		11.17	□□□□□ -0.62
PLD3-223	ENST00000600948		H0YIZ8	118 aa		11.16	□□□□□ -0.62
PLD3-223	ENST00000600948	CXCL3	P19876	107 aa		11.16	□□□□□ -0.62
PLD3-223	ENST00000600948	ATP6V1F	Q16864	119 aa		11.16	□□□□□ -0.62
PLD3-223	ENST00000600948	C10orf113	Q5VZT2	155 aa		11.16	□□□□□ -0.62
PLD3-223	ENST00000600948	OR5AC2	Q9NZP5	309 aa		11.16	□□□□□ -0.62
PLD3-223	ENST00000600948	DNAH1	Q9P2D7	4330 aa		11.16	□□□□□ -0.62
PLD3-223	ENST00000600948	HLA-DMB	P28068	263 aa		11.15	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms