RNA–Protein interactions for RNA: ENST00000600659.2

RPS28-203, Transcript of ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS28, Length 1,326 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-203ENST00000600659 CA1P00915 261 aaPredicted RBP11.5□□□□□ -0.57
RPS28-203ENST00000600659 CXCL3P19876 107 aa11.5□□□□□ -0.57
RPS28-203ENST00000600659 S100A11P31949 105 aa11.5□□□□□ -0.57
RPS28-203ENST00000600659 PSMB3P49720 205 aa11.5□□□□□ -0.57
RPS28-203ENST00000600659 SNRPD3P62318 126 aaKnown RBP11.5□□□□□ -0.57
RPS28-203ENST00000600659 CYCSP99999 105 aaKnown RBP11.5□□□□□ -0.57
RPS28-203ENST00000600659 STX12Q86Y82 276 aa11.5□□□□□ -0.57
RPS28-203ENST00000600659 C20orf173Q96LM9 149 aa11.5□□□□□ -0.57
RPS28-203ENST00000600659 ARL6Q9H0F7 186 aa11.5□□□□□ -0.57
RPS28-203ENST00000600659 TRAV8-2A0A0B4J237 113 aa11.49□□□□□ -0.57
RPS28-203ENST00000600659 H3BMM0 161 aa11.49□□□□□ -0.57
RPS28-203ENST00000600659 MPC2O95563 127 aa11.49□□□□□ -0.57
RPS28-203ENST00000600659 OR5G3P0C626 314 aa11.49□□□□□ -0.57
RPS28-203ENST00000600659 HLA-DRB4P13762 266 aa11.49□□□□□ -0.57
RPS28-203ENST00000600659 CAMLGP49069 296 aa11.49□□□□□ -0.57
RPS28-203ENST00000600659 RAP2BP61225 183 aa11.49□□□□□ -0.57
RPS28-203ENST00000600659 OPCMLQ14982 345 aa11.49□□□□□ -0.57
RPS28-203ENST00000600659 PXDC1Q5TGL8 231 aa11.49□□□□□ -0.57
RPS28-203ENST00000600659 MIC13Q5XKP0 118 aa11.49□□□□□ -0.57
RPS28-203ENST00000600659 CHAC2Q8WUX2 184 aa11.49□□□□□ -0.57
RPS28-203ENST00000600659 RSG1Q9BU20 258 aa11.49□□□□□ -0.57
RPS28-203ENST00000600659 HLA-DRB4X5D2U9 266 aa11.49□□□□□ -0.57
RPS28-203ENST00000600659 RYR2Q92736 4967 aa11.48□□□□□ -0.57
RPS28-203ENST00000600659 ISLRO14498 428 aa11.48□□□□□ -0.57
RPS28-203ENST00000600659 GALR1P47211 349 aa11.48□□□□□ -0.57
RPS28-203ENST00000600659 HBG1P69891 147 aa11.48□□□□□ -0.57
RPS28-203ENST00000600659 HBG2P69892 147 aa11.48□□□□□ -0.57
RPS28-203ENST00000600659 CSNK1G2-AS1Q8NCQ2 148 aa11.48□□□□□ -0.57
RPS28-203ENST00000600659 GPR82Q96P67 336 aa11.48□□□□□ -0.57
RPS28-203ENST00000600659 A0A087X0K7 114 aa11.47□□□□□ -0.57
RPS28-203ENST00000600659 A0A0J9YWU9 116 aa11.47□□□□□ -0.57
RPS28-203ENST00000600659 SPP1P10451 314 aa11.47□□□□□ -0.57
RPS28-203ENST00000600659 RPL29P47914 159 aaKnown RBP11.47□□□□□ -0.57
RPS28-203ENST00000600659 MEOX2P50222 304 aa11.47□□□□□ -0.57
RPS28-203ENST00000600659 ATP6V1FQ16864 119 aa11.47□□□□□ -0.57
RPS28-203ENST00000600659 ZFAND6Q6FIF0 208 aa11.47□□□□□ -0.57
RPS28-203ENST00000600659 LINC00305Q7Z4B0 112 aa11.47□□□□□ -0.57
RPS28-203ENST00000600659 OR11H7Q8NGC8 314 aa11.47□□□□□ -0.57
RPS28-203ENST00000600659 OR5C1Q8NGR4 320 aa11.47□□□□□ -0.57
RPS28-203ENST00000600659 GATAD1Q8WUU5 269 aa11.47□□□□□ -0.57
RPS28-203ENST00000600659 SAV1Q9H4B6 383 aaPredicted RBP11.47□□□□□ -0.57
RPS28-203ENST00000600659 A8MTW9 85 aa11.46□□□□□ -0.57
RPS28-203ENST00000600659 F6UB75 175 aa11.46□□□□□ -0.57
RPS28-203ENST00000600659 RLN2P04090 185 aa11.46□□□□□ -0.57
RPS28-203ENST00000600659 LYL1P12980 280 aa11.46□□□□□ -0.57
RPS28-203ENST00000600659 BAXQ07812 192 aa11.46□□□□□ -0.57
RPS28-203ENST00000600659 IGFL4Q6B9Z1 124 aa11.46□□□□□ -0.57
RPS28-203ENST00000600659 MORN3Q6PF18 240 aaPredicted RBP11.46□□□□□ -0.57
RPS28-203ENST00000600659 LINC00052Q96N35 136 aa11.46□□□□□ -0.57
RPS28-203ENST00000600659 MBD2Q9UBB5 411 aa11.46□□□□□ -0.57
RPS28-203ENST00000600659 DNAH1Q9P2D7 4330 aa11.46□□□□□ -0.57
RPS28-203ENST00000600659 RPL7P18124 248 aaKnown RBP11.45□□□□□ -0.58
RPS28-203ENST00000600659 FGF7P21781 194 aa11.45□□□□□ -0.58
RPS28-203ENST00000600659 ID1P41134 155 aa11.45□□□□□ -0.58
RPS28-203ENST00000600659 B2MP61769 119 aa11.45□□□□□ -0.58
RPS28-203ENST00000600659 FCN2Q15485 313 aa11.45□□□□□ -0.58
RPS28-203ENST00000600659 SAMD13Q5VXD3 122 aa11.45□□□□□ -0.58
RPS28-203ENST00000600659 FOXI2Q6ZQN5 318 aa11.45□□□□□ -0.58
RPS28-203ENST00000600659 THAP6Q8TBB0 222 aa11.45□□□□□ -0.58
RPS28-203ENST00000600659 NPCDR1Q9BY65 106 aa11.45□□□□□ -0.58
RPS28-203ENST00000600659 SLC25A31Q9H0C2 315 aa11.45□□□□□ -0.58
RPS28-203ENST00000600659 SLC39A9Q9NUM3 307 aa11.45□□□□□ -0.58
RPS28-203ENST00000600659 TENM2Q9NT68 2774 aa11.45□□□□□ -0.58
RPS28-203ENST00000600659 HYDINQ4G0P3 5121 aa11.44□□□□□ -0.58
RPS28-203ENST00000600659 A0A0J9YX75 114 aa11.44□□□□□ -0.58
RPS28-203ENST00000600659 ZNF705EA8MWA4 302 aaPredicted RBP11.44□□□□□ -0.58
RPS28-203ENST00000600659 COX7A2P2O60397 106 aa11.44□□□□□ -0.58
RPS28-203ENST00000600659 HLA-DMBP28068 263 aa11.44□□□□□ -0.58
RPS28-203ENST00000600659 S100A7P31151 101 aa11.44□□□□□ -0.58
RPS28-203ENST00000600659 CLINT1Q14677 625 aa11.44□□□□□ -0.58
RPS28-203ENST00000600659 OXA1LQ15070 435 aa11.44□□□□□ -0.58
RPS28-203ENST00000600659 RNF182Q8N6D2 247 aa11.44□□□□□ -0.58
RPS28-203ENST00000600659 ZNF709Q8N972 641 aa11.44□□□□□ -0.58
RPS28-203ENST00000600659 OR11H2Q8NH07 326 aa11.44□□□□□ -0.58
RPS28-203ENST00000600659 IL17DQ8TAD2 202 aa11.44□□□□□ -0.58
RPS28-203ENST00000600659 C16orf92Q96LL3 132 aa11.44□□□□□ -0.58
RPS28-203ENST00000600659 CLUHP3Q96NS8 147 aa11.44□□□□□ -0.58
RPS28-203ENST00000600659 RARRES2Q99969 163 aa11.44□□□□□ -0.58
RPS28-203ENST00000600659 CLEC5AQ9NY25 188 aa11.44□□□□□ -0.58
RPS28-203ENST00000600659 HSPB11Q9Y547 144 aa11.44□□□□□ -0.58
RPS28-203ENST00000600659 PXMP4Q9Y6I8 212 aa11.44□□□□□ -0.58
RPS28-203ENST00000600659 ELOA3CA0A087WX78 387 aaPredicted RBP11.43□□□□□ -0.58
RPS28-203ENST00000600659 TRAV5A0A0B4J249 113 aa11.43□□□□□ -0.58
RPS28-203ENST00000600659 MPDU1O75352 247 aa11.43□□□□□ -0.58
RPS28-203ENST00000600659 RAB31Q13636 194 aa11.43□□□□□ -0.58
RPS28-203ENST00000600659 TMEM41BQ5BJD5 291 aa11.43□□□□□ -0.58
RPS28-203ENST00000600659 GCSAMLQ5JQS6 135 aa11.43□□□□□ -0.58
RPS28-203ENST00000600659 C10orf113Q5VZT2 155 aa11.43□□□□□ -0.58
RPS28-203ENST00000600659 Q8NAQ8 132 aa11.43□□□□□ -0.58
RPS28-203ENST00000600659 WDR61Q9GZS3 305 aaKnown RBP11.43□□□□□ -0.58
RPS28-203ENST00000600659 DNAJC4Q9NNZ3 241 aa11.43□□□□□ -0.58
RPS28-203ENST00000600659 X6R8D5 127 aa11.43□□□□□ -0.58
RPS28-203ENST00000600659 ALMS1Q8TCU4 4167 aa11.43□□□□□ -0.58
RPS28-203ENST00000600659 PET100P0DJ07 73 aa11.42□□□□□ -0.58
RPS28-203ENST00000600659 IGLC2P0DOY2 106 aa11.42□□□□□ -0.58
RPS28-203ENST00000600659 ATF4P18848 351 aaPredicted RBP11.42□□□□□ -0.58
RPS28-203ENST00000600659 AMTNQ6UX39 209 aa11.42□□□□□ -0.58
RPS28-203ENST00000600659 H3BQ15 152 aa11.41□□□□□ -0.58
RPS28-203ENST00000600659 SLC17A3O00476 420 aa11.41□□□□□ -0.58
RPS28-203ENST00000600659 SNRPCP09234 159 aaKnown RBP11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms