RNA–Protein interactions for RNA: ENST00000600628.2

SSBP4-208, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-208ENST00000600628 KNCNA6PVL3 124 aa6.39□□□□□ -1.39
SSBP4-208ENST00000600628 HYPMO75409 117 aa6.39□□□□□ -1.39
SSBP4-208ENST00000600628 ORM2P19652 201 aa6.39□□□□□ -1.39
SSBP4-208ENST00000600628 RPL29P47914 159 aaKnown RBP6.39□□□□□ -1.39
SSBP4-208ENST00000600628 MEOX2P50222 304 aa6.39□□□□□ -1.39
SSBP4-208ENST00000600628 BCAP31P51572 246 aa6.39□□□□□ -1.39
SSBP4-208ENST00000600628 SNRPD3P62318 126 aaKnown RBP6.39□□□□□ -1.39
SSBP4-208ENST00000600628 CYCSP99999 105 aaKnown RBP6.39□□□□□ -1.39
SSBP4-208ENST00000600628 OPCMLQ14982 345 aa6.39□□□□□ -1.39
SSBP4-208ENST00000600628 OXA1LQ15070 435 aa6.39□□□□□ -1.39
SSBP4-208ENST00000600628 PSMG4Q5JS54 123 aa6.39□□□□□ -1.39
SSBP4-208ENST00000600628 GDF5OSQ5U4N7 250 aa6.39□□□□□ -1.39
SSBP4-208ENST00000600628 SAMD13Q5VXD3 122 aa6.39□□□□□ -1.39
SSBP4-208ENST00000600628 ZNF546Q86UE3 836 aa6.39□□□□□ -1.39
SSBP4-208ENST00000600628 OR8I2Q8N0Y5 310 aa6.39□□□□□ -1.39
SSBP4-208ENST00000600628 ZNF709Q8N972 641 aa6.39□□□□□ -1.39
SSBP4-208ENST00000600628 Q8NAQ8 132 aa6.39□□□□□ -1.39
SSBP4-208ENST00000600628 C20orf173Q96LM9 149 aa6.39□□□□□ -1.39
SSBP4-208ENST00000600628 SCRT1Q9BWW7 348 aa6.39□□□□□ -1.39
SSBP4-208ENST00000600628 C11orf68Q9H3H3 251 aaKnown RBP6.39□□□□□ -1.39
SSBP4-208ENST00000600628 SAV1Q9H4B6 383 aaPredicted RBP6.39□□□□□ -1.39
SSBP4-208ENST00000600628 UQCC1Q9NVA1 299 aa6.39□□□□□ -1.39
SSBP4-208ENST00000600628 MGAT4CQ9UBM8 478 aa6.39□□□□□ -1.39
SSBP4-208ENST00000600628 HIGD1AQ9Y241 93 aa6.39□□□□□ -1.39
SSBP4-208ENST00000600628 A0A0J9YWU9 116 aa6.38□□□□□ -1.39
SSBP4-208ENST00000600628 LCE6AA0A183 80 aa6.38□□□□□ -1.39
SSBP4-208ENST00000600628 E5RGE8 158 aa6.38□□□□□ -1.39
SSBP4-208ENST00000600628 L7N2F9 121 aa6.38□□□□□ -1.39
SSBP4-208ENST00000600628 GOSR2O14653 212 aa6.38□□□□□ -1.39
SSBP4-208ENST00000600628 MPC2O95563 127 aa6.38□□□□□ -1.39
SSBP4-208ENST00000600628 PVALBP20472 110 aaPredicted RBP6.38□□□□□ -1.39
SSBP4-208ENST00000600628 GALR1P47211 349 aa6.38□□□□□ -1.39
SSBP4-208ENST00000600628 CAV2P51636 162 aa6.38□□□□□ -1.39
SSBP4-208ENST00000600628 VAMP2P63027 116 aa6.38□□□□□ -1.39
SSBP4-208ENST00000600628 NHLH2Q02577 135 aa6.38□□□□□ -1.39
SSBP4-208ENST00000600628 ATP6V1FQ16864 119 aa6.38□□□□□ -1.39
SSBP4-208ENST00000600628 MORN5Q5VZ52 161 aa6.38□□□□□ -1.39
SSBP4-208ENST00000600628 SPATA31B1PQ5VZV4 182 aa6.38□□□□□ -1.39
SSBP4-208ENST00000600628 AMTNQ6UX39 209 aa6.38□□□□□ -1.39
SSBP4-208ENST00000600628 FOXI2Q6ZQN5 318 aa6.38□□□□□ -1.39
SSBP4-208ENST00000600628 STHQ8IWL8 128 aa6.38□□□□□ -1.39
SSBP4-208ENST00000600628 OR1B1Q8NGR6 318 aa6.38□□□□□ -1.39
SSBP4-208ENST00000600628 PPP1R1CQ8WVI7 109 aa6.38□□□□□ -1.39
SSBP4-208ENST00000600628 UHRF2Q96PU4 802 aa6.38□□□□□ -1.39
SSBP4-208ENST00000600628 TMEM147Q9BVK8 224 aa6.38□□□□□ -1.39
SSBP4-208ENST00000600628 ARV1Q9H2C2 271 aa6.38□□□□□ -1.39
SSBP4-208ENST00000600628 X6R8D5 127 aa6.38□□□□□ -1.39
SSBP4-208ENST00000600628 FRAS1Q86XX4 4008 aa6.37□□□□□ -1.39
SSBP4-208ENST00000600628 ELOA3CA0A087WX78 387 aaPredicted RBP6.37□□□□□ -1.39
SSBP4-208ENST00000600628 A0A0J9YX75 114 aa6.37□□□□□ -1.39
SSBP4-208ENST00000600628 SMCO3A2RU48 225 aa6.37□□□□□ -1.39
SSBP4-208ENST00000600628 MPDU1O75352 247 aa6.37□□□□□ -1.39
SSBP4-208ENST00000600628 CA1P00915 261 aaPredicted RBP6.37□□□□□ -1.39
SSBP4-208ENST00000600628 RPL7P18124 248 aaKnown RBP6.37□□□□□ -1.39
SSBP4-208ENST00000600628 CXCL3P19876 107 aa6.37□□□□□ -1.39
SSBP4-208ENST00000600628 S100A7P31151 101 aa6.37□□□□□ -1.39
SSBP4-208ENST00000600628 CAMLGP49069 296 aa6.37□□□□□ -1.39
SSBP4-208ENST00000600628 DEFB1P60022 68 aa6.37□□□□□ -1.39
SSBP4-208ENST00000600628 S100A10P60903 97 aa6.37□□□□□ -1.39
SSBP4-208ENST00000600628 BAXQ07812 192 aa6.37□□□□□ -1.39
SSBP4-208ENST00000600628 ACTL10Q5JWF8 245 aa6.37□□□□□ -1.39
SSBP4-208ENST00000600628 ZNF705AQ6ZN79 300 aaPredicted RBP6.37□□□□□ -1.39
SSBP4-208ENST00000600628 STX12Q86Y82 276 aa6.37□□□□□ -1.39
SSBP4-208ENST00000600628 TMEM217Q8N7C4 229 aa6.37□□□□□ -1.39
SSBP4-208ENST00000600628 SAT2Q96F10 170 aaPredicted RBP6.37□□□□□ -1.39
SSBP4-208ENST00000600628 RARRES2Q99969 163 aa6.37□□□□□ -1.39
SSBP4-208ENST00000600628 RSG1Q9BU20 258 aa6.37□□□□□ -1.39
SSBP4-208ENST00000600628 ARL6Q9H0F7 186 aa6.37□□□□□ -1.39
SSBP4-208ENST00000600628 ALG5Q9Y673 324 aa6.37□□□□□ -1.39
SSBP4-208ENST00000600628 ZNF705FA8MVS1 300 aaPredicted RBP6.36□□□□□ -1.39
SSBP4-208ENST00000600628 ZNF705DP0CH99 300 aaPredicted RBP6.36□□□□□ -1.39
SSBP4-208ENST00000600628 ZNF705BP0CI00 300 aaPredicted RBP6.36□□□□□ -1.39
SSBP4-208ENST00000600628 IGLC2P0DOY2 106 aa6.36□□□□□ -1.39
SSBP4-208ENST00000600628 CXCL2P19875 107 aa6.36□□□□□ -1.39
SSBP4-208ENST00000600628 ID1P41134 155 aa6.36□□□□□ -1.39
SSBP4-208ENST00000600628 RAP2BP61225 183 aa6.36□□□□□ -1.39
SSBP4-208ENST00000600628 HBG1P69891 147 aa6.36□□□□□ -1.39
SSBP4-208ENST00000600628 HBG2P69892 147 aa6.36□□□□□ -1.39
SSBP4-208ENST00000600628 MIC13Q5XKP0 118 aa6.36□□□□□ -1.39
SSBP4-208ENST00000600628 LINC00305Q7Z4B0 112 aa6.36□□□□□ -1.39
SSBP4-208ENST00000600628 OR5C1Q8NGR4 320 aa6.36□□□□□ -1.39
SSBP4-208ENST00000600628 OR11H2Q8NH07 326 aa6.36□□□□□ -1.39
SSBP4-208ENST00000600628 NEU1Q99519 415 aa6.36□□□□□ -1.39
SSBP4-208ENST00000600628 NPCDR1Q9BY65 106 aa6.36□□□□□ -1.39
SSBP4-208ENST00000600628 SLC25A22Q9H936 323 aa6.36□□□□□ -1.39
SSBP4-208ENST00000600628 DNAJC4Q9NNZ3 241 aa6.36□□□□□ -1.39
SSBP4-208ENST00000600628 DOK5Q9P104 306 aa6.36□□□□□ -1.39
SSBP4-208ENST00000600628 DNAH10Q8IVF4 4471 aa6.36□□□□□ -1.39
SSBP4-208ENST00000600628 RLN2P04090 185 aa6.35□□□□□ -1.39
SSBP4-208ENST00000600628 RBMY1A1P0DJD3 496 aaKnown RBP6.35□□□□□ -1.39
SSBP4-208ENST00000600628 RBMY1CP0DJD4 496 aa6.35□□□□□ -1.39
SSBP4-208ENST00000600628 RBMY1FQ15415 496 aaKnown RBP6.35□□□□□ -1.39
SSBP4-208ENST00000600628 S100A7AQ86SG5 101 aa6.35□□□□□ -1.39
SSBP4-208ENST00000600628 OR11H7Q8NGC8 314 aa6.35□□□□□ -1.39
SSBP4-208ENST00000600628 PARD6GQ9BYG4 376 aaPredicted RBP6.35□□□□□ -1.39
SSBP4-208ENST00000600628 SLC25A31Q9H0C2 315 aa6.35□□□□□ -1.39
SSBP4-208ENST00000600628 HRH4Q9H3N8 390 aa6.35□□□□□ -1.39
SSBP4-208ENST00000600628 ZNF331Q9NQX6 463 aaPredicted RBP6.35□□□□□ -1.39
SSBP4-208ENST00000600628 RPRMQ9NS64 109 aa6.35□□□□□ -1.39
SSBP4-208ENST00000600628 SLC39A9Q9NUM3 307 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms