RNA–Protein interactions for RNA: ENST00000600320.5

SHKBP1-222, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-222ENST00000600320 SEPSECSQ9HD40 501 aaKnown RBP15.01□□□□□ -0.01
SHKBP1-222ENST00000600320 PLA2G2EQ9NZK7 142 aa15.01□□□□□ -0.01
SHKBP1-222ENST00000600320 ZNF256Q9Y2P7 627 aaPredicted RBP15.01□□□□□ -0.01
SHKBP1-222ENST00000600320 BOLA1Q9Y3E2 137 aa15.01□□□□□ -0.01
SHKBP1-222ENST00000600320 SMAD5-AS1Q9Y6J3 95 aa15.01□□□□□ -0.01
SHKBP1-222ENST00000600320 MRPS12O15235 138 aaKnown RBP15□□□□□ -0.01
SHKBP1-222ENST00000600320 SPP1P10451 314 aa15□□□□□ -0.01
SHKBP1-222ENST00000600320 GP9P14770 177 aa15□□□□□ -0.01
SHKBP1-222ENST00000600320 S100A7P31151 101 aa15□□□□□ -0.01
SHKBP1-222ENST00000600320 TFPI2P48307 235 aa15□□□□□ -0.01
SHKBP1-222ENST00000600320 RPL11P62913 178 aaKnown RBP15□□□□□ -0.01
SHKBP1-222ENST00000600320 ACOT6Q3I5F7 207 aaPredicted RBP15□□□□□ -0.01
SHKBP1-222ENST00000600320 SIGLEC15Q6ZMC9 328 aa15□□□□□ -0.01
SHKBP1-222ENST00000600320 C17orf77Q96MU5 243 aa15□□□□□ -0.01
SHKBP1-222ENST00000600320 PRR25Q96S07 402 aa15□□□□□ -0.01
SHKBP1-222ENST00000600320 PKD1L1Q8TDX9 2849 aa15□□□□□ -0.01
SHKBP1-222ENST00000600320 HELTA6NFD8 242 aa14.99□□□□□ -0.01
SHKBP1-222ENST00000600320 M6PRP20645 277 aa14.99□□□□□ -0.01
SHKBP1-222ENST00000600320 SERF2P84101 59 aa14.99□□□□□ -0.01
SHKBP1-222ENST00000600320 WFDC3Q8IUB2 231 aa14.99□□□□□ -0.01
SHKBP1-222ENST00000600320 STOML3Q8TAV4 291 aa14.99□□□□□ -0.01
SHKBP1-222ENST00000600320 SPAG8Q99932 426 aaPredicted RBP14.99□□□□□ -0.01
SHKBP1-222ENST00000600320 MS4A6AQ9H2W1 248 aa14.99□□□□□ -0.01
SHKBP1-222ENST00000600320 PRB2P02812 416 aaPredicted RBP14.98□□□□□ -0.01
SHKBP1-222ENST00000600320 CD5P06127 495 aa14.98□□□□□ -0.01
SHKBP1-222ENST00000600320 TPT1P13693 172 aaKnown RBP14.98□□□□□ -0.01
SHKBP1-222ENST00000600320 FAM122CQ6P4D5 195 aa14.98□□□□□ -0.01
SHKBP1-222ENST00000600320 S100A7AQ86SG5 101 aa14.98□□□□□ -0.01
SHKBP1-222ENST00000600320 BAP18Q8IXM2 172 aa14.98□□□□□ -0.01
SHKBP1-222ENST00000600320 STXBP6Q8NFX7 210 aa14.98□□□□□ -0.01
SHKBP1-222ENST00000600320 OR10G4Q8NGN3 311 aa14.98□□□□□ -0.01
SHKBP1-222ENST00000600320 OR10G9Q8NGN4 311 aa14.98□□□□□ -0.01
SHKBP1-222ENST00000600320 OR10G7Q8NGN6 311 aa14.98□□□□□ -0.01
SHKBP1-222ENST00000600320 FAM167A-AS1Q96KT0 104 aa14.98□□□□□ -0.01
SHKBP1-222ENST00000600320 SLC25A2Q9BXI2 301 aa14.98□□□□□ -0.01
SHKBP1-222ENST00000600320 MRPL32Q9BYC8 188 aaKnown RBP14.98□□□□□ -0.01
SHKBP1-222ENST00000600320 FUT9Q9Y231 359 aa14.98□□□□□ -0.01
SHKBP1-222ENST00000600320 RPL7P18124 248 aaKnown RBP14.97□□□□□ -0.01
SHKBP1-222ENST00000600320 EIF5AP63241 154 aaKnown RBP14.97□□□□□ -0.01
SHKBP1-222ENST00000600320 FAM24BQ8N5W8 94 aa14.97□□□□□ -0.01
SHKBP1-222ENST00000600320 RPRMQ9NS64 109 aa14.97□□□□□ -0.01
SHKBP1-222ENST00000600320 SORL1Q92673 2214 aa14.97□□□□□ -0.01
SHKBP1-222ENST00000600320 K7EQG2 157 aa14.96□□□□□ -0.01
SHKBP1-222ENST00000600320 SNRPCP09234 159 aaKnown RBP14.96□□□□□ -0.01
SHKBP1-222ENST00000600320 CD7P09564 240 aa14.96□□□□□ -0.01
SHKBP1-222ENST00000600320 GALR1P47211 349 aa14.96□□□□□ -0.01
SHKBP1-222ENST00000600320 TMEM41BQ5BJD5 291 aa14.96□□□□□ -0.01
SHKBP1-222ENST00000600320 SLC51BQ86UW2 128 aa14.96□□□□□ -0.01
SHKBP1-222ENST00000600320 RPP25LQ8N5L8 163 aaKnown RBP14.96□□□□□ -0.01
SHKBP1-222ENST00000600320 DCANP1Q8TF63 244 aa14.96□□□□□ -0.01
SHKBP1-222ENST00000600320 GPR82Q96P67 336 aa14.96□□□□□ -0.01
SHKBP1-222ENST00000600320 DNASE2O00115 360 aaPredicted RBP14.95□□□□□ -0.02
SHKBP1-222ENST00000600320 SEC11BP0C7V7 166 aa14.95□□□□□ -0.02
SHKBP1-222ENST00000600320 RHOBP62745 196 aa14.95□□□□□ -0.02
SHKBP1-222ENST00000600320 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa14.95□□□□□ -0.02
SHKBP1-222ENST00000600320 NRN1Q9NPD7 142 aa14.95□□□□□ -0.02
SHKBP1-222ENST00000600320 AURKAIP1Q9NWT8 199 aaPredicted RBP14.95□□□□□ -0.02
SHKBP1-222ENST00000600320 ZMAT5Q9UDW3 170 aaKnown RBP14.95□□□□□ -0.02
SHKBP1-222ENST00000600320 TRAV2A0A0B4J234 112 aa14.94□□□□□ -0.02
SHKBP1-222ENST00000600320 OR4C46A6NHA9 309 aa14.94□□□□□ -0.02
SHKBP1-222ENST00000600320 SOCS3O14543 225 aa14.94□□□□□ -0.02
SHKBP1-222ENST00000600320 MBP02144 154 aa14.94□□□□□ -0.02
SHKBP1-222ENST00000600320 PYYP10082 97 aa14.94□□□□□ -0.02
SHKBP1-222ENST00000600320 PAFAH1B2P68402 229 aa14.94□□□□□ -0.02
SHKBP1-222ENST00000600320 AKR1C8PQ5T2L2 129 aa14.94□□□□□ -0.02
SHKBP1-222ENST00000600320 SSX7Q7RTT5 188 aa14.94□□□□□ -0.02
SHKBP1-222ENST00000600320 BPIFA4PQ86YQ2 179 aa14.94□□□□□ -0.02
SHKBP1-222ENST00000600320 TMED6Q8WW62 240 aa14.94□□□□□ -0.02
SHKBP1-222ENST00000600320 ZNF503Q96F45 646 aa14.94□□□□□ -0.02
SHKBP1-222ENST00000600320 RNF24Q9Y225 148 aa14.94□□□□□ -0.02
SHKBP1-222ENST00000600320 A0A087X0K7 114 aa14.93□□□□□ -0.02
SHKBP1-222ENST00000600320 A0A1W2PPV4 95 aa14.93□□□□□ -0.02
SHKBP1-222ENST00000600320 H3BQ15 152 aa14.93□□□□□ -0.02
SHKBP1-222ENST00000600320 H3BTX0 84 aa14.93□□□□□ -0.02
SHKBP1-222ENST00000600320 HMGB3O15347 200 aaKnown RBP14.93□□□□□ -0.02
SHKBP1-222ENST00000600320 IGLC2P0DOY2 106 aa14.93□□□□□ -0.02
SHKBP1-222ENST00000600320 ATF4P18848 351 aaPredicted RBP14.93□□□□□ -0.02
SHKBP1-222ENST00000600320 C4BPBP20851 252 aa14.93□□□□□ -0.02
SHKBP1-222ENST00000600320 CDC34P49427 236 aaPredicted RBP14.93□□□□□ -0.02
SHKBP1-222ENST00000600320 CD81P60033 236 aa14.93□□□□□ -0.02
SHKBP1-222ENST00000600320 ZNF726P1Q15940 193 aa14.93□□□□□ -0.02
SHKBP1-222ENST00000600320 Q8N1Y9 231 aa14.93□□□□□ -0.02
SHKBP1-222ENST00000600320 C19orf73Q9NVV2 129 aa14.93□□□□□ -0.02
SHKBP1-222ENST00000600320 TMEM14CQ9P0S9 112 aa14.93□□□□□ -0.02
SHKBP1-222ENST00000600320 UBQLN2Q9UHD9 624 aa14.93□□□□□ -0.02
SHKBP1-222ENST00000600320 ODF3L2Q3SX64 289 aa14.92□□□□□ -0.02
SHKBP1-222ENST00000600320 RAB24Q969Q5 203 aa14.92□□□□□ -0.02
SHKBP1-222ENST00000600320 WFDC10AQ9H1F0 79 aa14.92□□□□□ -0.02
SHKBP1-222ENST00000600320 ZNF586Q9NXT0 402 aa14.92□□□□□ -0.02
SHKBP1-222ENST00000600320 ACTR3CQ9C0K3 210 aaPredicted RBP14.91□□□□□ -0.02
SHKBP1-222ENST00000600320 OR51M1Q9H341 326 aa14.91□□□□□ -0.02
SHKBP1-222ENST00000600320 TRAV8-2A0A0B4J237 113 aa14.9□□□□□ -0.02
SHKBP1-222ENST00000600320 K7EIL1 84 aa14.9□□□□□ -0.02
SHKBP1-222ENST00000600320 ZNF688P0C7X2 276 aa14.9□□□□□ -0.02
SHKBP1-222ENST00000600320 FHITP49789 147 aa14.9□□□□□ -0.02
SHKBP1-222ENST00000600320 TAS2R45P59539 299 aa14.9□□□□□ -0.02
SHKBP1-222ENST00000600320 KHDC3LQ587J8 217 aa14.9□□□□□ -0.02
SHKBP1-222ENST00000600320 IGFL4Q6B9Z1 124 aa14.9□□□□□ -0.02
SHKBP1-222ENST00000600320 GTSCR1Q86UQ5 136 aa14.9□□□□□ -0.02
SHKBP1-222ENST00000600320 FXYD5Q96DB9 178 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms