RNA–Protein interactions for RNA: ENST00000600274.5

ARHGEF1-220, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 3,439 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-220ENST00000600274 ECSCRQ19T08 205 aa9.18□□□□□ -0.94
ARHGEF1-220ENST00000600274 VMO1Q7Z5L0 202 aa9.18□□□□□ -0.94
ARHGEF1-220ENST00000600274 PRNTQ86SH4 94 aa9.18□□□□□ -0.94
ARHGEF1-220ENST00000600274 RCHY1Q96PM5 261 aa9.18□□□□□ -0.94
ARHGEF1-220ENST00000600274 F11RQ9Y624 299 aaKnown RBP9.18□□□□□ -0.94
ARHGEF1-220ENST00000600274 M0QZK8 103 aa9.18□□□□□ -0.94
ARHGEF1-220ENST00000600274 GNG7O60262 68 aa9.18□□□□□ -0.94
ARHGEF1-220ENST00000600274 RPL15P61313 204 aaKnown RBP9.18□□□□□ -0.94
ARHGEF1-220ENST00000600274 MRGPRG-AS1Q2M3A8 158 aa9.18□□□□□ -0.94
ARHGEF1-220ENST00000600274 TMEM249Q2WGJ8 235 aa9.18□□□□□ -0.94
ARHGEF1-220ENST00000600274 GOLT1AQ6ZVE7 132 aa9.18□□□□□ -0.94
ARHGEF1-220ENST00000600274 TCF24Q7RTU0 167 aa9.18□□□□□ -0.94
ARHGEF1-220ENST00000600274 ZNF329Q86UD4 541 aa9.18□□□□□ -0.94
ARHGEF1-220ENST00000600274 FXYD5Q96DB9 178 aa9.18□□□□□ -0.94
ARHGEF1-220ENST00000600274 FNDC10F2Z333 226 aa9.17□□□□□ -0.94
ARHGEF1-220ENST00000600274 NBR2O15453 112 aa9.17□□□□□ -0.94
ARHGEF1-220ENST00000600274 OR2J3O76001 311 aa9.17□□□□□ -0.94
ARHGEF1-220ENST00000600274 APCSP02743 223 aa9.17□□□□□ -0.94
ARHGEF1-220ENST00000600274 C11orf52Q96A22 123 aa9.17□□□□□ -0.94
ARHGEF1-220ENST00000600274 C17orf77Q96MU5 243 aa9.17□□□□□ -0.94
ARHGEF1-220ENST00000600274 TMUB1Q9BVT8 246 aa9.17□□□□□ -0.94
ARHGEF1-220ENST00000600274 ZNF462Q96JM2 2506 aa9.17□□□□□ -0.94
ARHGEF1-220ENST00000600274 TEX22C9J3V5 150 aa9.17□□□□□ -0.94
ARHGEF1-220ENST00000600274 ZFP36P26651 326 aaKnown RBP9.17□□□□□ -0.94
ARHGEF1-220ENST00000600274 ATP5IP56385 69 aaPredicted RBP9.17□□□□□ -0.94
ARHGEF1-220ENST00000600274 C19orf24Q9BVV8 132 aa9.17□□□□□ -0.94
ARHGEF1-220ENST00000600274 TP73-AS1Q9UF72 201 aa9.17□□□□□ -0.94
ARHGEF1-220ENST00000600274 C9JCJ5 164 aa9.17□□□□□ -0.94
ARHGEF1-220ENST00000600274 CEACAM3P40198 252 aa9.17□□□□□ -0.94
ARHGEF1-220ENST00000600274 SAPCD1Q5SSQ6 148 aa9.17□□□□□ -0.94
ARHGEF1-220ENST00000600274 Q71RC1 249 aaPredicted RBP9.17□□□□□ -0.94
ARHGEF1-220ENST00000600274 DYNAPQ8N1N2 210 aa9.17□□□□□ -0.94
ARHGEF1-220ENST00000600274 DAZAP1Q96EP5 407 aaKnown RBP9.17□□□□□ -0.94
ARHGEF1-220ENST00000600274 Q9H3A6 140 aa9.17□□□□□ -0.94
ARHGEF1-220ENST00000600274 LINC00527Q9UJ94 153 aa9.17□□□□□ -0.94
ARHGEF1-220ENST00000600274 RNF114Q9Y508 228 aa9.17□□□□□ -0.94
ARHGEF1-220ENST00000600274 PTPN13Q12923 2485 aa9.16□□□□□ -0.94
ARHGEF1-220ENST00000600274 TMSB15BA0A087X1C1 80 aa9.16□□□□□ -0.94
ARHGEF1-220ENST00000600274 COA6Q5JTJ3 125 aaKnown RBP9.16□□□□□ -0.94
ARHGEF1-220ENST00000600274 CLEC2AQ6UVW9 174 aa9.16□□□□□ -0.94
ARHGEF1-220ENST00000600274 BCL6BQ8N143 479 aaPredicted RBP9.16□□□□□ -0.94
ARHGEF1-220ENST00000600274 RNF2Q99496 336 aa9.16□□□□□ -0.94
ARHGEF1-220ENST00000600274 CLEC5AQ9NY25 188 aa9.16□□□□□ -0.94
ARHGEF1-220ENST00000600274 IGHV3-49A0A0A0MS15 119 aa9.16□□□□□ -0.94
ARHGEF1-220ENST00000600274 IGFL4Q6B9Z1 124 aa9.16□□□□□ -0.94
ARHGEF1-220ENST00000600274 FAM71F2Q6NXP2 309 aa9.16□□□□□ -0.94
ARHGEF1-220ENST00000600274 STPG4Q8N801 248 aa9.16□□□□□ -0.94
ARHGEF1-220ENST00000600274 IGHV3-66A0A0C4DH42 116 aa9.15□□□□□ -0.94
ARHGEF1-220ENST00000600274 PSMB11A5LHX3 300 aa9.15□□□□□ -0.94
ARHGEF1-220ENST00000600274 OR2T8A6NH00 312 aa9.15□□□□□ -0.94
ARHGEF1-220ENST00000600274 TYMSP04818 313 aa9.15□□□□□ -0.94
ARHGEF1-220ENST00000600274 NUDT10Q8NFP7 164 aa9.15□□□□□ -0.94
ARHGEF1-220ENST00000600274 SVIPQ8NHG7 77 aa9.15□□□□□ -0.94
ARHGEF1-220ENST00000600274 NUDT11Q96G61 164 aa9.15□□□□□ -0.94
ARHGEF1-220ENST00000600274 BPESC1Q9GZL8 116 aa9.15□□□□□ -0.94
ARHGEF1-220ENST00000600274 EPDR1Q9UM22 224 aa9.15□□□□□ -0.94
ARHGEF1-220ENST00000600274 VPS13CQ709C8 3753 aa9.15□□□□□ -0.94
ARHGEF1-220ENST00000600274 MUC21A0A0G2JKD1 596 aa9.15□□□□□ -0.94
ARHGEF1-220ENST00000600274 MUC21A0A140T8X8 626 aa9.15□□□□□ -0.94
ARHGEF1-220ENST00000600274 M0R3E3 92 aa9.15□□□□□ -0.94
ARHGEF1-220ENST00000600274 CX3CL1P78423 397 aa9.15□□□□□ -0.94
ARHGEF1-220ENST00000600274 MUC21Q5SSG8 566 aa9.15□□□□□ -0.94
ARHGEF1-220ENST00000600274 CIARTQ8N365 385 aaPredicted RBP9.15□□□□□ -0.94
ARHGEF1-220ENST00000600274 TNFRSF14Q92956 283 aa9.15□□□□□ -0.94
ARHGEF1-220ENST00000600274 NAA38Q9BRA0 125 aaKnown RBP9.15□□□□□ -0.94
ARHGEF1-220ENST00000600274 FBLL1A6NHQ2 334 aaKnown RBP9.15□□□□□ -0.95
ARHGEF1-220ENST00000600274 C19orf84I3L1E1 186 aa9.15□□□□□ -0.95
ARHGEF1-220ENST00000600274 C3orf79P0CE67 100 aa9.15□□□□□ -0.95
ARHGEF1-220ENST00000600274 PGLYRP4Q96LB8 373 aa9.15□□□□□ -0.95
ARHGEF1-220ENST00000600274 SLC25A39Q9BZJ4 359 aaPredicted RBP9.15□□□□□ -0.95
ARHGEF1-220ENST00000600274 CHODLQ9H9P2 273 aa9.15□□□□□ -0.95
ARHGEF1-220ENST00000600274 LAMTOR2Q9Y2Q5 125 aa9.15□□□□□ -0.95
ARHGEF1-220ENST00000600274 IGSF10Q6WRI0 2623 aa9.15□□□□□ -0.95
ARHGEF1-220ENST00000600274 SETD2Q9BYW2 2564 aaPredicted RBP9.14□□□□□ -0.95
ARHGEF1-220ENST00000600274 CCDC168Q8NDH2 2452 aa9.14□□□□□ -0.95
ARHGEF1-220ENST00000600274 HIGD1CA8MV81 97 aa9.14□□□□□ -0.95
ARHGEF1-220ENST00000600274 IGLV2-8P01709 118 aa9.14□□□□□ -0.95
ARHGEF1-220ENST00000600274 UQCR10Q9UDW1 63 aa9.14□□□□□ -0.95
ARHGEF1-220ENST00000600274 AMY1AP04745 511 aa9.14□□□□□ -0.95
ARHGEF1-220ENST00000600274 GPX1P07203 203 aa9.14□□□□□ -0.95
ARHGEF1-220ENST00000600274 IGLC1P0CG04 106 aa9.14□□□□□ -0.95
ARHGEF1-220ENST00000600274 NDPQ00604 133 aa9.14□□□□□ -0.95
ARHGEF1-220ENST00000600274 FAM120AOSQ5T036 256 aa9.14□□□□□ -0.95
ARHGEF1-220ENST00000600274 THAP8Q8NA92 274 aa9.14□□□□□ -0.95
ARHGEF1-220ENST00000600274 DNLZQ5SXM8 178 aa9.14□□□□□ -0.95
ARHGEF1-220ENST00000600274 TMEM219Q86XT9 240 aa9.14□□□□□ -0.95
ARHGEF1-220ENST00000600274 KLHDC1Q8N7A1 406 aa9.14□□□□□ -0.95
ARHGEF1-220ENST00000600274 C8orf31Q8N9H6 132 aa9.14□□□□□ -0.95
ARHGEF1-220ENST00000600274 OR4B1Q8NGF8 309 aa9.14□□□□□ -0.95
ARHGEF1-220ENST00000600274 CDC42EP3Q9UKI2 254 aa9.14□□□□□ -0.95
ARHGEF1-220ENST00000600274 TP53TG3Q9ULZ0 132 aa9.14□□□□□ -0.95
ARHGEF1-220ENST00000600274 CELSR2Q9HCU4 2923 aa9.13□□□□□ -0.95
ARHGEF1-220ENST00000600274 TMEM116Q8NCL8 245 aa9.13□□□□□ -0.95
ARHGEF1-220ENST00000600274 TRGV9Q99603 122 aa9.13□□□□□ -0.95
ARHGEF1-220ENST00000600274 ALKBH7Q9BT30 221 aaPredicted RBP9.13□□□□□ -0.95
ARHGEF1-220ENST00000600274 OSTCQ9NRP0 149 aa9.13□□□□□ -0.95
ARHGEF1-220ENST00000600274 NOTCH3Q9UM47 2321 aa9.13□□□□□ -0.95
ARHGEF1-220ENST00000600274 ZNF207O43670 478 aaKnown RBP9.13□□□□□ -0.95
ARHGEF1-220ENST00000600274 IGKV1-17P01599 117 aa9.13□□□□□ -0.95
ARHGEF1-220ENST00000600274 P01737 135 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 129.7 ms