RNA–Protein interactions for RNA: ENST00000600236.1

HIF3A-217, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 3

Gene HIF3A, Length 313 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-217ENST00000600236 DCANP1Q8TF63 244 aa8.35□□□□□ -1.07
HIF3A-217ENST00000600236 SLC25A31Q9H0C2 315 aa8.35□□□□□ -1.07
HIF3A-217ENST00000600236 HRH4Q9H3N8 390 aa8.35□□□□□ -1.07
HIF3A-217ENST00000600236 CSMD3Q7Z407 3707 aa8.35□□□□□ -1.07
HIF3A-217ENST00000600236 DEFB4AO15263 64 aa8.34□□□□□ -1.07
HIF3A-217ENST00000600236 IFNA10P01566 189 aa8.34□□□□□ -1.07
HIF3A-217ENST00000600236 PAX9P55771 341 aa8.34□□□□□ -1.07
HIF3A-217ENST00000600236 ACTL10Q5JWF8 245 aa8.34□□□□□ -1.07
HIF3A-217ENST00000600236 EIF5AL1Q6IS14 154 aaKnown RBP8.34□□□□□ -1.07
HIF3A-217ENST00000600236 C16orf54Q6UWD8 224 aa8.34□□□□□ -1.07
HIF3A-217ENST00000600236 ACY3Q96HD9 319 aa8.34□□□□□ -1.07
HIF3A-217ENST00000600236 C1QTNF4Q9BXJ3 329 aa8.34□□□□□ -1.07
HIF3A-217ENST00000600236 U3KQE9 123 aa8.34□□□□□ -1.07
HIF3A-217ENST00000600236 BORCS7-ASMTA0A0B4J1R7 106 aa8.33□□□□□ -1.08
HIF3A-217ENST00000600236 IGSF23A1L1A6 192 aa8.33□□□□□ -1.08
HIF3A-217ENST00000600236 KNCNA6PVL3 124 aa8.33□□□□□ -1.08
HIF3A-217ENST00000600236 WRBO00258 174 aa8.33□□□□□ -1.08
HIF3A-217ENST00000600236 SSSCA1O60232 199 aa8.33□□□□□ -1.08
HIF3A-217ENST00000600236 NXPH3O95157 252 aa8.33□□□□□ -1.08
HIF3A-217ENST00000600236 TOMM40O96008 361 aa8.33□□□□□ -1.08
HIF3A-217ENST00000600236 RD3LP0DJH9 198 aa8.33□□□□□ -1.08
HIF3A-217ENST00000600236 ATP5IP56385 69 aaPredicted RBP8.33□□□□□ -1.08
HIF3A-217ENST00000600236 VAMP2P63027 116 aa8.33□□□□□ -1.08
HIF3A-217ENST00000600236 PSMG4Q5JS54 123 aa8.33□□□□□ -1.08
HIF3A-217ENST00000600236 RPL7L1Q6DKI1 246 aaKnown RBP8.33□□□□□ -1.08
HIF3A-217ENST00000600236 SIGLEC15Q6ZMC9 328 aa8.33□□□□□ -1.08
HIF3A-217ENST00000600236 COMMD7Q86VX2 200 aa8.33□□□□□ -1.08
HIF3A-217ENST00000600236 RPP25LQ8N5L8 163 aaKnown RBP8.33□□□□□ -1.08
HIF3A-217ENST00000600236 TMEM252Q8N6L7 170 aa8.33□□□□□ -1.08
HIF3A-217ENST00000600236 Q8NAQ8 132 aa8.33□□□□□ -1.08
HIF3A-217ENST00000600236 DTD1Q8TEA8 209 aa8.33□□□□□ -1.08
HIF3A-217ENST00000600236 GLMPQ8WWB7 406 aa8.33□□□□□ -1.08
HIF3A-217ENST00000600236 NPIPB3Q92617 1050 aa8.33□□□□□ -1.08
HIF3A-217ENST00000600236 SMIM8Q96KF7 97 aa8.33□□□□□ -1.08
HIF3A-217ENST00000600236 SEPSECSQ9HD40 501 aaKnown RBP8.33□□□□□ -1.08
HIF3A-217ENST00000600236 NRN1Q9NPD7 142 aa8.33□□□□□ -1.08
HIF3A-217ENST00000600236 HSPB7Q9UBY9 170 aa8.33□□□□□ -1.08
HIF3A-217ENST00000600236 LYSTQ99698 3801 aa8.33□□□□□ -1.08
HIF3A-217ENST00000600236 HYDINQ4G0P3 5121 aa8.32□□□□□ -1.08
HIF3A-217ENST00000600236 ALMS1Q8TCU4 4167 aa8.32□□□□□ -1.08
HIF3A-217ENST00000600236 IGHV4-28A0A0C4DH34 117 aa8.32□□□□□ -1.08
HIF3A-217ENST00000600236 ZNF705EA8MWA4 302 aaPredicted RBP8.32□□□□□ -1.08
HIF3A-217ENST00000600236 SYNGR2O43760 224 aa8.32□□□□□ -1.08
HIF3A-217ENST00000600236 MED6O75586 246 aa8.32□□□□□ -1.08
HIF3A-217ENST00000600236 FABP1P07148 127 aa8.32□□□□□ -1.08
HIF3A-217ENST00000600236 USF2Q15853 346 aaPredicted RBP8.32□□□□□ -1.08
HIF3A-217ENST00000600236 EIF4E3Q8N5X7 224 aaKnown RBP8.32□□□□□ -1.08
HIF3A-217ENST00000600236 OR51G1Q8NGK1 321 aa8.32□□□□□ -1.08
HIF3A-217ENST00000600236 SLC35E1Q96K37 410 aa8.32□□□□□ -1.08
HIF3A-217ENST00000600236 MAGT1Q9H0U3 335 aa8.32□□□□□ -1.08
HIF3A-217ENST00000600236 TRAV10A0A0B4J240 114 aa8.31□□□□□ -1.08
HIF3A-217ENST00000600236 FAM24AA6NFZ4 105 aa8.31□□□□□ -1.08
HIF3A-217ENST00000600236 IGLL5B9A064 214 aa8.31□□□□□ -1.08
HIF3A-217ENST00000600236 BUB3O43684 328 aa8.31□□□□□ -1.08
HIF3A-217ENST00000600236 SEC11BP0C7V7 166 aa8.31□□□□□ -1.08
HIF3A-217ENST00000600236 CAV2P51636 162 aa8.31□□□□□ -1.08
HIF3A-217ENST00000600236 ZNF266Q14584 549 aa8.31□□□□□ -1.08
HIF3A-217ENST00000600236 FAM74A1Q5RGS3 127 aa8.31□□□□□ -1.08
HIF3A-217ENST00000600236 OR8G2PQ6IF36 304 aa8.31□□□□□ -1.08
HIF3A-217ENST00000600236 RNF141Q8WVD5 230 aa8.31□□□□□ -1.08
HIF3A-217ENST00000600236 RNF125Q96EQ8 232 aa8.31□□□□□ -1.08
HIF3A-217ENST00000600236 SAT2Q96F10 170 aaPredicted RBP8.31□□□□□ -1.08
HIF3A-217ENST00000600236 WFDC1Q9HC57 220 aa8.31□□□□□ -1.08
HIF3A-217ENST00000600236 ZFP92A6NM28 416 aa8.3□□□□□ -1.08
HIF3A-217ENST00000600236 GIG44P09565 113 aaPredicted RBP8.3□□□□□ -1.08
HIF3A-217ENST00000600236 PSG1P11464 419 aa8.3□□□□□ -1.08
HIF3A-217ENST00000600236 HLA-DMBP28068 263 aa8.3□□□□□ -1.08
HIF3A-217ENST00000600236 ID1P41134 155 aa8.3□□□□□ -1.08
HIF3A-217ENST00000600236 SULT1A1P50225 295 aa8.3□□□□□ -1.08
HIF3A-217ENST00000600236 SULT1A2P50226 295 aa8.3□□□□□ -1.08
HIF3A-217ENST00000600236 RAB11AP62491 216 aa8.3□□□□□ -1.08
HIF3A-217ENST00000600236 NHLH2Q02577 135 aa8.3□□□□□ -1.08
HIF3A-217ENST00000600236 STX12Q86Y82 276 aa8.3□□□□□ -1.08
HIF3A-217ENST00000600236 TMEM170AQ8WVE7 144 aa8.3□□□□□ -1.08
HIF3A-217ENST00000600236 PCNPQ8WW12 178 aaKnown RBP8.3□□□□□ -1.08
HIF3A-217ENST00000600236 TMED6Q8WW62 240 aa8.3□□□□□ -1.08
HIF3A-217ENST00000600236 PBDC1Q9BVG4 233 aa8.3□□□□□ -1.08
HIF3A-217ENST00000600236 RBKSQ9H477 322 aa8.3□□□□□ -1.08
HIF3A-217ENST00000600236 CLEC5AQ9NY25 188 aa8.3□□□□□ -1.08
HIF3A-217ENST00000600236 PLECQ15149 4684 aaKnown RBP8.29□□□□□ -1.08
HIF3A-217ENST00000600236 RBMY1A1P0DJD3 496 aaKnown RBP8.29□□□□□ -1.08
HIF3A-217ENST00000600236 RBMY1CP0DJD4 496 aa8.29□□□□□ -1.08
HIF3A-217ENST00000600236 GPX4P36969 197 aaPredicted RBP8.29□□□□□ -1.08
HIF3A-217ENST00000600236 RBMY1FQ15415 496 aaKnown RBP8.29□□□□□ -1.08
HIF3A-217ENST00000600236 TMEM14EPQ6UXP3 125 aa8.29□□□□□ -1.08
HIF3A-217ENST00000600236 CIB3Q96Q77 187 aaPredicted RBP8.29□□□□□ -1.08
HIF3A-217ENST00000600236 ATP5SQ99766 215 aa8.29□□□□□ -1.08
HIF3A-217ENST00000600236 PARD6GQ9BYG4 376 aaPredicted RBP8.29□□□□□ -1.08
HIF3A-217ENST00000600236 SMIM3Q9BZL3 60 aa8.29□□□□□ -1.08
HIF3A-217ENST00000600236 X6R8D5 127 aa8.29□□□□□ -1.08
HIF3A-217ENST00000600236 HLA-DRB4P13762 266 aa8.28□□□□□ -1.08
HIF3A-217ENST00000600236 RAB5CP51148 216 aa8.28□□□□□ -1.08
HIF3A-217ENST00000600236 LYZP61626 148 aa8.28□□□□□ -1.08
HIF3A-217ENST00000600236 RPP30P78346 268 aaKnown RBP8.28□□□□□ -1.08
HIF3A-217ENST00000600236 SAMD13Q5VXD3 122 aa8.28□□□□□ -1.08
HIF3A-217ENST00000600236 Q6ZTC4 211 aa8.28□□□□□ -1.08
HIF3A-217ENST00000600236 CSNK1G2-AS1Q8NCQ2 148 aa8.28□□□□□ -1.08
HIF3A-217ENST00000600236 OR5C1Q8NGR4 320 aa8.28□□□□□ -1.08
HIF3A-217ENST00000600236 PSENENQ9NZ42 101 aa8.28□□□□□ -1.08
HIF3A-217ENST00000600236 APLNQ9ULZ1 77 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms