RNA–Protein interactions for RNA: ENST00000600190.1

FARP1-229, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 3

Gene FARP1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-229ENST00000600190 CAMLGP49069 296 aa13.84□□□□□ -0.19
FARP1-229ENST00000600190 GBGT1Q8N5D6 347 aa13.84□□□□□ -0.19
FARP1-229ENST00000600190 ZNF709Q8N972 641 aa13.84□□□□□ -0.19
FARP1-229ENST00000600190 ZNF414Q96IQ9 312 aa13.84□□□□□ -0.19
FARP1-229ENST00000600190 RNF126Q9BV68 326 aa13.84□□□□□ -0.19
FARP1-229ENST00000600190 MBD2Q9UBB5 411 aa13.84□□□□□ -0.19
FARP1-229ENST00000600190 UBE2L5PA0A1B0GUS4 154 aa13.83□□□□□ -0.2
FARP1-229ENST00000600190 BUB3O43684 328 aa13.83□□□□□ -0.2
FARP1-229ENST00000600190 IFNA5P01569 189 aa13.83□□□□□ -0.2
FARP1-229ENST00000600190 LINC00869P0C866 280 aa13.83□□□□□ -0.2
FARP1-229ENST00000600190 GATA2P23769 480 aaPredicted RBP13.83□□□□□ -0.2
FARP1-229ENST00000600190 NANOS2P60321 138 aaKnown RBP13.83□□□□□ -0.2
FARP1-229ENST00000600190 C1orf194Q5T5A4 169 aa13.83□□□□□ -0.2
FARP1-229ENST00000600190 C16orf54Q6UWD8 224 aa13.83□□□□□ -0.2
FARP1-229ENST00000600190 OR8I2Q8N0Y5 310 aa13.83□□□□□ -0.2
FARP1-229ENST00000600190 STXBP6Q8NFX7 210 aa13.83□□□□□ -0.2
FARP1-229ENST00000600190 GATAD1Q8WUU5 269 aa13.83□□□□□ -0.2
FARP1-229ENST00000600190 HIGD1AQ9Y241 93 aa13.83□□□□□ -0.2
FARP1-229ENST00000600190 U3KQE9 123 aa13.83□□□□□ -0.2
FARP1-229ENST00000600190 FGF7P21781 194 aa13.82□□□□□ -0.2
FARP1-229ENST00000600190 FAM90A2PQ658T7 463 aa13.82□□□□□ -0.2
FARP1-229ENST00000600190 SIGLEC15Q6ZMC9 328 aa13.82□□□□□ -0.2
FARP1-229ENST00000600190 INO80EQ8NBZ0 244 aaPredicted RBP13.82□□□□□ -0.2
FARP1-229ENST00000600190 OR11H2Q8NH07 326 aa13.82□□□□□ -0.2
FARP1-229ENST00000600190 C11orf45Q8TAV5 145 aa13.82□□□□□ -0.2
FARP1-229ENST00000600190 SCGB1C1Q8TD33 95 aa13.82□□□□□ -0.2
FARP1-229ENST00000600190 ARL6Q9H0F7 186 aa13.82□□□□□ -0.2
FARP1-229ENST00000600190 WDR83OSQ9Y284 106 aa13.82□□□□□ -0.2
FARP1-229ENST00000600190 TRAV2A0A0B4J234 112 aa13.81□□□□□ -0.2
FARP1-229ENST00000600190 C17orf112F2Z3M2 114 aa13.81□□□□□ -0.2
FARP1-229ENST00000600190 CLINT1Q14677 625 aa13.81□□□□□ -0.2
FARP1-229ENST00000600190 VWC2Q2TAL6 325 aa13.81□□□□□ -0.2
FARP1-229ENST00000600190 GPR82Q96P67 336 aa13.81□□□□□ -0.2
FARP1-229ENST00000600190 MFFQ9GZY8 342 aa13.81□□□□□ -0.2
FARP1-229ENST00000600190 MS4A6AQ9H2W1 248 aa13.81□□□□□ -0.2
FARP1-229ENST00000600190 KCNIP2Q9NS61 270 aa13.81□□□□□ -0.2
FARP1-229ENST00000600190 HSPB11Q9Y547 144 aa13.81□□□□□ -0.2
FARP1-229ENST00000600190 HERC2O95714 4834 aa13.81□□□□□ -0.2
FARP1-229ENST00000600190 HECTD4Q9Y4D8 3996 aa13.8□□□□□ -0.2
FARP1-229ENST00000600190 ELOA3CA0A087WX78 387 aaPredicted RBP13.8□□□□□ -0.2
FARP1-229ENST00000600190 COX7A2P2O60397 106 aa13.8□□□□□ -0.2
FARP1-229ENST00000600190 GALR1P47211 349 aa13.8□□□□□ -0.2
FARP1-229ENST00000600190 PLP1P60201 277 aa13.8□□□□□ -0.2
FARP1-229ENST00000600190 OR1L4Q8NGR5 311 aa13.8□□□□□ -0.2
FARP1-229ENST00000600190 OR2T35Q8NGX2 323 aa13.8□□□□□ -0.2
FARP1-229ENST00000600190 PFDN5Q99471 154 aa13.8□□□□□ -0.2
FARP1-229ENST00000600190 SLC25A22Q9H936 323 aa13.8□□□□□ -0.2
FARP1-229ENST00000600190 DOK5Q9P104 306 aa13.8□□□□□ -0.2
FARP1-229ENST00000600190 DEFB4AO15263 64 aa13.79□□□□□ -0.2
FARP1-229ENST00000600190 CA1P00915 261 aaPredicted RBP13.79□□□□□ -0.2
FARP1-229ENST00000600190 RPL29P47914 159 aaKnown RBP13.79□□□□□ -0.2
FARP1-229ENST00000600190 TMEM182Q6ZP80 229 aaPredicted RBP13.79□□□□□ -0.2
FARP1-229ENST00000600190 GLMPQ8WWB7 406 aa13.79□□□□□ -0.2
FARP1-229ENST00000600190 MGST2Q99735 147 aa13.79□□□□□ -0.2
FARP1-229ENST00000600190 ATP5SQ99766 215 aa13.79□□□□□ -0.2
FARP1-229ENST00000600190 ZNF98A6NK75 572 aa13.78□□□□□ -0.2
FARP1-229ENST00000600190 ID1P41134 155 aa13.78□□□□□ -0.2
FARP1-229ENST00000600190 SNRPD3P62318 126 aaKnown RBP13.78□□□□□ -0.2
FARP1-229ENST00000600190 SLC25A39Q9BZJ4 359 aaPredicted RBP13.78□□□□□ -0.2
FARP1-229ENST00000600190 ARV1Q9H2C2 271 aa13.78□□□□□ -0.2
FARP1-229ENST00000600190 C11orf68Q9H3H3 251 aaKnown RBP13.78□□□□□ -0.2
FARP1-229ENST00000600190 DNAJC4Q9NNZ3 241 aa13.78□□□□□ -0.2
FARP1-229ENST00000600190 NRN1Q9NPD7 142 aa13.78□□□□□ -0.2
FARP1-229ENST00000600190 B2MP61769 119 aa13.77□□□□□ -0.21
FARP1-229ENST00000600190 SAMD13Q5VXD3 122 aa13.77□□□□□ -0.21
FARP1-229ENST00000600190 C10orf113Q5VZT2 155 aa13.77□□□□□ -0.21
FARP1-229ENST00000600190 LEMD1Q68G75 181 aa13.77□□□□□ -0.21
FARP1-229ENST00000600190 C2CD4CQ8TF44 421 aa13.77□□□□□ -0.21
FARP1-229ENST00000600190 CHAC2Q8WUX2 184 aa13.77□□□□□ -0.21
FARP1-229ENST00000600190 SMIM3Q9BZL3 60 aa13.77□□□□□ -0.21
FARP1-229ENST00000600190 FXYD6-FXYD2A0A087WZ82 144 aa13.76□□□□□ -0.21
FARP1-229ENST00000600190 RPL7P18124 248 aaKnown RBP13.76□□□□□ -0.21
FARP1-229ENST00000600190 MEOX2P50222 304 aa13.76□□□□□ -0.21
FARP1-229ENST00000600190 ZNF266Q14584 549 aa13.76□□□□□ -0.21
FARP1-229ENST00000600190 MIC13Q5XKP0 118 aa13.76□□□□□ -0.21
FARP1-229ENST00000600190 WDR61Q9GZS3 305 aaKnown RBP13.76□□□□□ -0.21
FARP1-229ENST00000600190 SLC39A9Q9NUM3 307 aa13.76□□□□□ -0.21
FARP1-229ENST00000600190 DNAH6Q9C0G6 4158 aa13.75□□□□□ -0.21
FARP1-229ENST00000600190 DEFB131AP59861 70 aa13.75□□□□□ -0.21
FARP1-229ENST00000600190 PRR20EP86478 221 aa13.75□□□□□ -0.21
FARP1-229ENST00000600190 PRR20CP86479 221 aa13.75□□□□□ -0.21
FARP1-229ENST00000600190 PRR20DP86480 221 aa13.75□□□□□ -0.21
FARP1-229ENST00000600190 PRR20BP86481 221 aa13.75□□□□□ -0.21
FARP1-229ENST00000600190 PRR20AP86496 221 aa13.75□□□□□ -0.21
FARP1-229ENST00000600190 OPCMLQ14982 345 aa13.75□□□□□ -0.21
FARP1-229ENST00000600190 LINC00305Q7Z4B0 112 aa13.75□□□□□ -0.21
FARP1-229ENST00000600190 LRRC20Q8TCA0 184 aa13.75□□□□□ -0.21
FARP1-229ENST00000600190 SHANK2-AS3Q9BTD1 123 aa13.75□□□□□ -0.21
FARP1-229ENST00000600190 NPCDR1Q9BY65 106 aa13.75□□□□□ -0.21
FARP1-229ENST00000600190 SEPSECSQ9HD40 501 aaKnown RBP13.75□□□□□ -0.21
FARP1-229ENST00000600190 PXMP4Q9Y6I8 212 aa13.75□□□□□ -0.21
FARP1-229ENST00000600190 H3BRN7 92 aa13.74□□□□□ -0.21
FARP1-229ENST00000600190 K7EQG2 157 aa13.74□□□□□ -0.21
FARP1-229ENST00000600190 AQP10Q96PS8 301 aa13.74□□□□□ -0.21
FARP1-229ENST00000600190 IGLL5B9A064 214 aa13.73□□□□□ -0.21
FARP1-229ENST00000600190 BPIFA4PQ86YQ2 179 aa13.73□□□□□ -0.21
FARP1-229ENST00000600190 STHQ8IWL8 128 aa13.73□□□□□ -0.21
FARP1-229ENST00000600190 FAM24BQ8N5W8 94 aa13.73□□□□□ -0.21
FARP1-229ENST00000600190 UHRF2Q96PU4 802 aa13.73□□□□□ -0.21
FARP1-229ENST00000600190 RSG1Q9BU20 258 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms