RNA–Protein interactions for RNA: ENST00000600026.5

LTBP4-227, Transcript of latent transforming growth factor beta binding protein 4, human

TSL 3

Gene LTBP4, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LTBP4-227	ENST00000600026	CDC34	P49427	236 aa	Predicted RBP	16.61	■□□□□ 0.25
LTBP4-227	ENST00000600026	C1orf194	Q5T5A4	169 aa		16.61	■□□□□ 0.25
LTBP4-227	ENST00000600026	SLC25A22	Q9H936	323 aa		16.61	■□□□□ 0.25
LTBP4-227	ENST00000600026	SEPSECS	Q9HD40	501 aa	Known RBP	16.61	■□□□□ 0.25
LTBP4-227	ENST00000600026	CHEK1	O14757	476 aa		16.6	■□□□□ 0.25
LTBP4-227	ENST00000600026	BUB3	O43684	328 aa		16.6	■□□□□ 0.25
LTBP4-227	ENST00000600026	IFNA7	P01567	189 aa		16.6	■□□□□ 0.25
LTBP4-227	ENST00000600026	IGLV1-51	P01701	117 aa		16.6	■□□□□ 0.25
LTBP4-227	ENST00000600026	APOH	P02749	345 aa	Predicted RBP	16.6	■□□□□ 0.25
LTBP4-227	ENST00000600026	SULT1A2	P50226	295 aa		16.6	■□□□□ 0.25
LTBP4-227	ENST00000600026	TAS2R45	P59539	299 aa		16.6	■□□□□ 0.25
LTBP4-227	ENST00000600026	EGFEM1P	Q0D2K5	195 aa		16.6	■□□□□ 0.25
LTBP4-227	ENST00000600026	TEX261	Q6UWH6	196 aa		16.6	■□□□□ 0.25
LTBP4-227	ENST00000600026	RPP25L	Q8N5L8	163 aa	Known RBP	16.6	■□□□□ 0.25
LTBP4-227	ENST00000600026	DYNLRB2	Q8TF09	96 aa		16.6	■□□□□ 0.25
LTBP4-227	ENST00000600026	SCRT1	Q9BWW7	348 aa		16.6	■□□□□ 0.25
LTBP4-227	ENST00000600026	IGHV3-66	A0A0C4DH42	116 aa		16.59	■□□□□ 0.25
LTBP4-227	ENST00000600026	KRTAP10-11	P60412	298 aa		16.59	■□□□□ 0.25
LTBP4-227	ENST00000600026	SPATA31B1P	Q5VZV4	182 aa		16.59	■□□□□ 0.25
LTBP4-227	ENST00000600026	C16orf54	Q6UWD8	224 aa		16.59	■□□□□ 0.25
LTBP4-227	ENST00000600026	MIR17HG	Q75NE6	70 aa		16.59	■□□□□ 0.25
LTBP4-227	ENST00000600026	OR8I2	Q8N0Y5	310 aa		16.59	■□□□□ 0.25
LTBP4-227	ENST00000600026	FAM213B	Q8TBF2	198 aa		16.59	■□□□□ 0.25
LTBP4-227	ENST00000600026	GPR82	Q96P67	336 aa		16.59	■□□□□ 0.25
LTBP4-227	ENST00000600026	TECR	Q9NZ01	308 aa	Known RBP	16.59	■□□□□ 0.25
LTBP4-227	ENST00000600026	PLA2G2E	Q9NZK7	142 aa		16.59	■□□□□ 0.25
LTBP4-227	ENST00000600026	CTXND1	A0A1B0GTU2	59 aa		16.58	■□□□□ 0.24
LTBP4-227	ENST00000600026	LEMD1	Q68G75	181 aa		16.58	■□□□□ 0.24
LTBP4-227	ENST00000600026	RNF141	Q8WVD5	230 aa		16.58	■□□□□ 0.24
LTBP4-227	ENST00000600026	CD5	P06127	495 aa		16.57	■□□□□ 0.24
LTBP4-227	ENST00000600026	RPL7	P18124	248 aa	Known RBP	16.57	■□□□□ 0.24
LTBP4-227	ENST00000600026	KHDC3L	Q587J8	217 aa		16.57	■□□□□ 0.24
LTBP4-227	ENST00000600026	FAM74A1	Q5RGS3	127 aa		16.57	■□□□□ 0.24
LTBP4-227	ENST00000600026	MORN5	Q5VZ52	161 aa		16.57	■□□□□ 0.24
LTBP4-227	ENST00000600026	BPIFA4P	Q86YQ2	179 aa		16.57	■□□□□ 0.24
LTBP4-227	ENST00000600026	ZNF680	Q8NEM1	530 aa		16.57	■□□□□ 0.24
LTBP4-227	ENST00000600026	RAB24	Q969Q5	203 aa		16.57	■□□□□ 0.24
LTBP4-227	ENST00000600026	MLX	Q9UH92	298 aa		16.57	■□□□□ 0.24
LTBP4-227	ENST00000600026	SELENOK	Q9Y6D0	94 aa		16.57	■□□□□ 0.24
LTBP4-227	ENST00000600026	TRAV5	A0A0B4J249	113 aa		16.56	■□□□□ 0.24
LTBP4-227	ENST00000600026	HELT	A6NFD8	242 aa		16.56	■□□□□ 0.24
LTBP4-227	ENST00000600026	GALR1	P47211	349 aa		16.56	■□□□□ 0.24
LTBP4-227	ENST00000600026	DEFB114	Q30KQ6	69 aa		16.56	■□□□□ 0.24
LTBP4-227	ENST00000600026	STXBP6	Q8NFX7	210 aa		16.56	■□□□□ 0.24
LTBP4-227	ENST00000600026	GLMP	Q8WWB7	406 aa		16.56	■□□□□ 0.24
LTBP4-227	ENST00000600026	UBQLN2	Q9UHD9	624 aa		16.56	■□□□□ 0.24
LTBP4-227	ENST00000600026	SIGLEC15	Q6ZMC9	328 aa		16.55	■□□□□ 0.24
LTBP4-227	ENST00000600026	LRRC20	Q8TCA0	184 aa		16.55	■□□□□ 0.24
LTBP4-227	ENST00000600026	SLC25A2	Q9BXI2	301 aa		16.55	■□□□□ 0.24
LTBP4-227	ENST00000600026	TG	P01266	2768 aa		16.54	■□□□□ 0.24
LTBP4-227	ENST00000600026	ZNF705E	A8MWA4	302 aa	Predicted RBP	16.54	■□□□□ 0.24
LTBP4-227	ENST00000600026	OR7C2	O60412	319 aa		16.54	■□□□□ 0.24
LTBP4-227	ENST00000600026	STAG3L2	P0CL84	134 aa		16.54	■□□□□ 0.24
LTBP4-227	ENST00000600026	STAG3L3	P0CL85	134 aa		16.54	■□□□□ 0.24
LTBP4-227	ENST00000600026	FHIT	P49789	147 aa		16.54	■□□□□ 0.24
LTBP4-227	ENST00000600026	ZNF726P1	Q15940	193 aa		16.54	■□□□□ 0.24
LTBP4-227	ENST00000600026	CD300E	Q496F6	205 aa	Predicted RBP	16.54	■□□□□ 0.24
LTBP4-227	ENST00000600026	PQLC2	Q6ZP29	291 aa		16.54	■□□□□ 0.24
LTBP4-227	ENST00000600026	TCF24	Q7RTU0	167 aa		16.54	■□□□□ 0.24
LTBP4-227	ENST00000600026	OR2K2	Q8NGT1	345 aa		16.54	■□□□□ 0.24
LTBP4-227	ENST00000600026	TMEM14C	Q9P0S9	112 aa		16.54	■□□□□ 0.24
LTBP4-227	ENST00000600026	MAP1LC3B2	A6NCE7	125 aa		16.53	■□□□□ 0.24
LTBP4-227	ENST00000600026	IZUMO1R	A6ND01	250 aa		16.53	■□□□□ 0.24
LTBP4-227	ENST00000600026	HMGB3	O15347	200 aa	Known RBP	16.53	■□□□□ 0.24
LTBP4-227	ENST00000600026	H2AFB1	P0C5Y9	115 aa		16.53	■□□□□ 0.24
LTBP4-227	ENST00000600026	ATF4	P18848	351 aa	Predicted RBP	16.53	■□□□□ 0.24
LTBP4-227	ENST00000600026	RPL11	P62913	178 aa	Known RBP	16.53	■□□□□ 0.24
LTBP4-227	ENST00000600026	BLOC1S1	P78537	153 aa		16.53	■□□□□ 0.24
LTBP4-227	ENST00000600026	LCN15	Q6UWW0	184 aa		16.53	■□□□□ 0.24
LTBP4-227	ENST00000600026	FAM167A-AS1	Q96KT0	104 aa		16.53	■□□□□ 0.24
LTBP4-227	ENST00000600026	PAXX	Q9BUH6	204 aa		16.53	■□□□□ 0.24
LTBP4-227	ENST00000600026	MAP1LC3B	Q9GZQ8	125 aa		16.53	■□□□□ 0.24
LTBP4-227	ENST00000600026	OR51M1	Q9H341	326 aa		16.53	■□□□□ 0.24
LTBP4-227	ENST00000600026	ZMAT5	Q9UDW3	170 aa	Known RBP	16.53	■□□□□ 0.24
LTBP4-227	ENST00000600026	ZNF785	A8K8V0	405 aa		16.52	■□□□□ 0.24
LTBP4-227	ENST00000600026	TEX46	H3BTG2	121 aa		16.52	■□□□□ 0.24
LTBP4-227	ENST00000600026	EIF3G	O75821	320 aa	Known RBP eCLIP	16.52	■□□□□ 0.24
LTBP4-227	ENST00000600026	CXorf1	O96002	111 aa		16.52	■□□□□ 0.24
LTBP4-227	ENST00000600026	LCN12	Q6JVE5	192 aa		16.52	■□□□□ 0.24
LTBP4-227	ENST00000600026	RBPMS2	Q6ZRY4	209 aa	Known RBP	16.52	■□□□□ 0.24
LTBP4-227	ENST00000600026	SSX7	Q7RTT5	188 aa		16.52	■□□□□ 0.24
LTBP4-227	ENST00000600026	MBD3L1	Q8WWY6	194 aa		16.52	■□□□□ 0.24
LTBP4-227	ENST00000600026	ZNF256	Q9Y2P7	627 aa	Predicted RBP	16.52	■□□□□ 0.24
LTBP4-227	ENST00000600026	PRB2	P02812	416 aa	Predicted RBP	16.51	■□□□□ 0.23
LTBP4-227	ENST00000600026	ZNF767P	Q75MW2	155 aa		16.51	■□□□□ 0.23
LTBP4-227	ENST00000600026	TMEM61	Q8N0U2	210 aa		16.51	■□□□□ 0.23
LTBP4-227	ENST00000600026	SFT2D1	Q8WV19	159 aa		16.51	■□□□□ 0.23
LTBP4-227	ENST00000600026	SAT2	Q96F10	170 aa	Predicted RBP	16.51	■□□□□ 0.23
LTBP4-227	ENST00000600026	AURKAIP1	Q9NWT8	199 aa	Predicted RBP	16.51	■□□□□ 0.23
LTBP4-227	ENST00000600026	TRAV25	A0A0B4J276	109 aa		16.5	■□□□□ 0.23
LTBP4-227	ENST00000600026	ARL14EPL	P0DKL9	152 aa		16.5	■□□□□ 0.23
LTBP4-227	ENST00000600026	PYY	P10082	97 aa		16.5	■□□□□ 0.23
LTBP4-227	ENST00000600026	GP9	P14770	177 aa		16.5	■□□□□ 0.23
LTBP4-227	ENST00000600026	MEOX2	P50222	304 aa		16.5	■□□□□ 0.23
LTBP4-227	ENST00000600026	PAFAH1B2	P68402	229 aa		16.5	■□□□□ 0.23
LTBP4-227	ENST00000600026	FAM90A2P	Q658T7	463 aa		16.5	■□□□□ 0.23
LTBP4-227	ENST00000600026	PRR25	Q96S07	402 aa		16.5	■□□□□ 0.23
LTBP4-227	ENST00000600026	NOTCH1	P46531	2555 aa		16.5	■□□□□ 0.23
LTBP4-227	ENST00000600026	MRPS12	O15235	138 aa	Known RBP	16.49	■□□□□ 0.23
LTBP4-227	ENST00000600026	HBE1	P02100	147 aa		16.49	■□□□□ 0.23

Retrieved 100 of 20,778 RNA–protein pairs in 33 ms