RNA–Protein interactions for RNA: ENST00000599543.3

PNKP-213, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-213ENST00000599543 E5RGE8 158 aa13.6□□□□□ -0.23
PNKP-213ENST00000599543 MPC2O95563 127 aa13.6□□□□□ -0.23
PNKP-213ENST00000599543 SULT1A1P50225 295 aa13.6□□□□□ -0.23
PNKP-213ENST00000599543 TCTAP57738 103 aa13.6□□□□□ -0.23
PNKP-213ENST00000599543 STX12Q86Y82 276 aa13.6□□□□□ -0.23
PNKP-213ENST00000599543 BPIFCQ8NFQ6 507 aa13.6□□□□□ -0.23
PNKP-213ENST00000599543 OR1B1Q8NGR6 318 aa13.6□□□□□ -0.23
PNKP-213ENST00000599543 PPP1R14BQ96C90 147 aa13.6□□□□□ -0.23
PNKP-213ENST00000599543 MBD2Q9UBB5 411 aa13.6□□□□□ -0.23
PNKP-213ENST00000599543 UBE2L5PA0A1B0GUS4 154 aa13.59□□□□□ -0.23
PNKP-213ENST00000599543 ZNF705EA8MWA4 302 aaPredicted RBP13.59□□□□□ -0.23
PNKP-213ENST00000599543 SIGLEC15Q6ZMC9 328 aa13.59□□□□□ -0.23
PNKP-213ENST00000599543 MGST2Q99735 147 aa13.59□□□□□ -0.23
PNKP-213ENST00000599543 NRN1Q9NPD7 142 aa13.59□□□□□ -0.23
PNKP-213ENST00000599543 UQCC1Q9NVA1 299 aa13.59□□□□□ -0.23
PNKP-213ENST00000599543 CLEC5AQ9NY25 188 aa13.59□□□□□ -0.23
PNKP-213ENST00000599543 IGLL5B9A064 214 aa13.58□□□□□ -0.24
PNKP-213ENST00000599543 AGPAT2O15120 278 aa13.58□□□□□ -0.24
PNKP-213ENST00000599543 BUB3O43684 328 aa13.58□□□□□ -0.24
PNKP-213ENST00000599543 RBMY1A1P0DJD3 496 aaKnown RBP13.58□□□□□ -0.24
PNKP-213ENST00000599543 RBMY1CP0DJD4 496 aa13.58□□□□□ -0.24
PNKP-213ENST00000599543 NUTF2P61970 127 aaKnown RBP13.58□□□□□ -0.24
PNKP-213ENST00000599543 RBMY1FQ15415 496 aaKnown RBP13.58□□□□□ -0.24
PNKP-213ENST00000599543 TEPPQ6URK8 271 aa13.58□□□□□ -0.24
PNKP-213ENST00000599543 FNDC10F2Z333 226 aa13.57□□□□□ -0.24
PNKP-213ENST00000599543 LINC00869P0C866 280 aa13.57□□□□□ -0.24
PNKP-213ENST00000599543 NUP62P37198 522 aaPredicted RBP13.57□□□□□ -0.24
PNKP-213ENST00000599543 CLINT1Q14677 625 aa13.57□□□□□ -0.24
PNKP-213ENST00000599543 Q5BKY6 102 aa13.57□□□□□ -0.24
PNKP-213ENST00000599543 TMEM147Q9BVK8 224 aa13.57□□□□□ -0.24
PNKP-213ENST00000599543 GGACTQ9BVM4 153 aa13.57□□□□□ -0.24
PNKP-213ENST00000599543 SLC25A22Q9H936 323 aa13.57□□□□□ -0.24
PNKP-213ENST00000599543 SEPSECSQ9HD40 501 aaKnown RBP13.57□□□□□ -0.24
PNKP-213ENST00000599543 X6R8D5 127 aa13.57□□□□□ -0.24
PNKP-213ENST00000599543 HLA-DMBP28068 263 aa13.56□□□□□ -0.24
PNKP-213ENST00000599543 S100A11P31949 105 aa13.56□□□□□ -0.24
PNKP-213ENST00000599543 BAXQ07812 192 aa13.56□□□□□ -0.24
PNKP-213ENST00000599543 CSNK1G2-AS1Q8NCQ2 148 aa13.56□□□□□ -0.24
PNKP-213ENST00000599543 OR5C1Q8NGR4 320 aa13.56□□□□□ -0.24
PNKP-213ENST00000599543 THAP6Q8TBB0 222 aa13.56□□□□□ -0.24
PNKP-213ENST00000599543 SCRT1Q9BWW7 348 aa13.56□□□□□ -0.24
PNKP-213ENST00000599543 C1QTNF4Q9BXJ3 329 aa13.56□□□□□ -0.24
PNKP-213ENST00000599543 SMIM3Q9BZL3 60 aa13.56□□□□□ -0.24
PNKP-213ENST00000599543 SLC25A31Q9H0C2 315 aa13.56□□□□□ -0.24
PNKP-213ENST00000599543 PFDN2Q9UHV9 154 aa13.56□□□□□ -0.24
PNKP-213ENST00000599543 SLC45A2Q9UMX9 530 aa13.56□□□□□ -0.24
PNKP-213ENST00000599543 OR5G3P0C626 314 aa13.55□□□□□ -0.24
PNKP-213ENST00000599543 FGF7P21781 194 aa13.55□□□□□ -0.24
PNKP-213ENST00000599543 HBG1P69891 147 aa13.55□□□□□ -0.24
PNKP-213ENST00000599543 HBG2P69892 147 aa13.55□□□□□ -0.24
PNKP-213ENST00000599543 MIC13Q5XKP0 118 aa13.55□□□□□ -0.24
PNKP-213ENST00000599543 UHRF2Q96PU4 802 aa13.55□□□□□ -0.24
PNKP-213ENST00000599543 ARL6Q9H0F7 186 aa13.55□□□□□ -0.24
PNKP-213ENST00000599543 WDR83OSQ9Y284 106 aa13.55□□□□□ -0.24
PNKP-213ENST00000599543 ELOA3CA0A087WX78 387 aaPredicted RBP13.54□□□□□ -0.24
PNKP-213ENST00000599543 TRAV10A0A0B4J240 114 aa13.54□□□□□ -0.24
PNKP-213ENST00000599543 CAMLGP49069 296 aa13.54□□□□□ -0.24
PNKP-213ENST00000599543 VWC2Q2TAL6 325 aa13.54□□□□□ -0.24
PNKP-213ENST00000599543 PATE2Q6UY27 113 aa13.54□□□□□ -0.24
PNKP-213ENST00000599543 Q6ZTC4 211 aa13.54□□□□□ -0.24
PNKP-213ENST00000599543 SLC25A32Q9H2D1 315 aa13.54□□□□□ -0.24
PNKP-213ENST00000599543 HYPMO75409 117 aa13.53□□□□□ -0.24
PNKP-213ENST00000599543 PET100P0DJ07 73 aa13.53□□□□□ -0.24
PNKP-213ENST00000599543 RPL12P30050 165 aaKnown RBP13.53□□□□□ -0.24
PNKP-213ENST00000599543 SELENOTP62341 195 aa13.53□□□□□ -0.24
PNKP-213ENST00000599543 PRR20EP86478 221 aa13.53□□□□□ -0.24
PNKP-213ENST00000599543 PRR20CP86479 221 aa13.53□□□□□ -0.24
PNKP-213ENST00000599543 PRR20DP86480 221 aa13.53□□□□□ -0.24
PNKP-213ENST00000599543 PRR20BP86481 221 aa13.53□□□□□ -0.24
PNKP-213ENST00000599543 PRR20AP86496 221 aa13.53□□□□□ -0.24
PNKP-213ENST00000599543 ZNF546Q86UE3 836 aa13.53□□□□□ -0.24
PNKP-213ENST00000599543 OR8I2Q8N0Y5 310 aa13.53□□□□□ -0.24
PNKP-213ENST00000599543 XCL2Q9UBD3 114 aa13.53□□□□□ -0.24
PNKP-213ENST00000599543 APLNQ9ULZ1 77 aa13.53□□□□□ -0.24
PNKP-213ENST00000599543 HIGD1AQ9Y241 93 aa13.53□□□□□ -0.24
PNKP-213ENST00000599543 HSPB11Q9Y547 144 aa13.53□□□□□ -0.24
PNKP-213ENST00000599543 ZNF98A6NK75 572 aa13.52□□□□□ -0.25
PNKP-213ENST00000599543 H3BMM0 161 aa13.52□□□□□ -0.25
PNKP-213ENST00000599543 CFDP00746 253 aaPredicted RBP13.52□□□□□ -0.25
PNKP-213ENST00000599543 HLA-DRB4P13762 266 aa13.52□□□□□ -0.25
PNKP-213ENST00000599543 ATP6V1FQ16864 119 aa13.52□□□□□ -0.25
PNKP-213ENST00000599543 SLC25A39Q9BZJ4 359 aaPredicted RBP13.52□□□□□ -0.25
PNKP-213ENST00000599543 HLA-DRB4X5D2U9 266 aa13.52□□□□□ -0.25
PNKP-213ENST00000599543 VPS13DQ5THJ4 4388 aa13.51□□□□□ -0.25
PNKP-213ENST00000599543 H3BRN7 92 aa13.51□□□□□ -0.25
PNKP-213ENST00000599543 GIPP09681 153 aaPredicted RBP13.51□□□□□ -0.25
PNKP-213ENST00000599543 RAP2BP61225 183 aa13.51□□□□□ -0.25
PNKP-213ENST00000599543 CHAC2Q8WUX2 184 aa13.51□□□□□ -0.25
PNKP-213ENST00000599543 CELA1Q9UNI1 258 aa13.51□□□□□ -0.25
PNKP-213ENST00000599543 DNAH10Q8IVF4 4471 aa13.51□□□□□ -0.25
PNKP-213ENST00000599543 HECTD4Q9Y4D8 3996 aa13.51□□□□□ -0.25
PNKP-213ENST00000599543 DNAH6Q9C0G6 4158 aa13.5□□□□□ -0.25
PNKP-213ENST00000599543 IGHV4-4A0A075B6R2 117 aa13.5□□□□□ -0.25
PNKP-213ENST00000599543 SMLR1H3BR10 107 aa13.5□□□□□ -0.25
PNKP-213ENST00000599543 COX7A2P2O60397 106 aa13.5□□□□□ -0.25
PNKP-213ENST00000599543 SNRPCP09234 159 aaKnown RBP13.5□□□□□ -0.25
PNKP-213ENST00000599543 ID1P41134 155 aa13.5□□□□□ -0.25
PNKP-213ENST00000599543 RAB31Q13636 194 aa13.5□□□□□ -0.25
PNKP-213ENST00000599543 OPCMLQ14982 345 aa13.5□□□□□ -0.25
PNKP-213ENST00000599543 MORN5Q5VZ52 161 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms