RNA–Protein interactions for RNA: ENST00000599454.5

PNKP-212, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 529 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-212ENST00000599454 CCDC59Q9P031 241 aaKnown RBP14.89□□□□□ -0.03
PNKP-212ENST00000599454 NBDYA0A0U1RRE5 68 aa14.88□□□□□ -0.03
PNKP-212ENST00000599454 ZNF705GA8MUZ8 300 aaPredicted RBP14.88□□□□□ -0.03
PNKP-212ENST00000599454 C16orf90A8MZG2 172 aa14.88□□□□□ -0.03
PNKP-212ENST00000599454 TNP2Q05952 138 aa14.88□□□□□ -0.03
PNKP-212ENST00000599454 TMEM128Q5BJH2 165 aa14.88□□□□□ -0.03
PNKP-212ENST00000599454 PRSS46E5RG02 174 aa14.87□□□□□ -0.03
PNKP-212ENST00000599454 M0R2Z0 102 aa14.87□□□□□ -0.03
PNKP-212ENST00000599454 DEFB130BP0DP73 79 aa14.87□□□□□ -0.03
PNKP-212ENST00000599454 DEFB130AP0DP74 79 aa14.87□□□□□ -0.03
PNKP-212ENST00000599454 ORM2P19652 201 aa14.87□□□□□ -0.03
PNKP-212ENST00000599454 FAUP35544 74 aaKnown RBP14.87□□□□□ -0.03
PNKP-212ENST00000599454 C6orf223Q8N319 242 aa14.87□□□□□ -0.03
PNKP-212ENST00000599454 ZNRF2Q8NHG8 242 aa14.87□□□□□ -0.03
PNKP-212ENST00000599454 F5H768 121 aa14.86□□□□□ -0.03
PNKP-212ENST00000599454 ATP5G1P05496 136 aa14.86□□□□□ -0.03
PNKP-212ENST00000599454 ATP5G3P48201 142 aa14.86□□□□□ -0.03
PNKP-212ENST00000599454 CCL18P55774 89 aa14.86□□□□□ -0.03
PNKP-212ENST00000599454 TMEM256Q8N2U0 113 aa14.86□□□□□ -0.03
PNKP-212ENST00000599454 MRPS26Q9BYN8 205 aaKnown RBP14.86□□□□□ -0.03
PNKP-212ENST00000599454 TRAV8-2A0A0B4J237 113 aa14.85□□□□□ -0.03
PNKP-212ENST00000599454 BOLA2-SMG1P6H3BVE0 249 aa14.85□□□□□ -0.03
PNKP-212ENST00000599454 SYNGR2O43760 224 aa14.85□□□□□ -0.03
PNKP-212ENST00000599454 AKR1C1Q04828 323 aa14.85□□□□□ -0.03
PNKP-212ENST00000599454 TMED4Q7Z7H5 227 aa14.85□□□□□ -0.03
PNKP-212ENST00000599454 DYNC2LI1Q8TCX1 351 aa14.85□□□□□ -0.03
PNKP-212ENST00000599454 RAB2BQ8WUD1 216 aa14.85□□□□□ -0.03
PNKP-212ENST00000599454 HSPG2P98160 4391 aa14.85□□□□□ -0.03
PNKP-212ENST00000599454 PLAC8L1A1L4L8 177 aa14.84□□□□□ -0.03
PNKP-212ENST00000599454 CBY3A6NI87 242 aa14.84□□□□□ -0.03
PNKP-212ENST00000599454 NUDT3O95989 172 aa14.84□□□□□ -0.03
PNKP-212ENST00000599454 PRM2P04554 102 aa14.84□□□□□ -0.03
PNKP-212ENST00000599454 RPL7P18124 248 aaKnown RBP14.84□□□□□ -0.03
PNKP-212ENST00000599454 GATA2P23769 480 aaPredicted RBP14.84□□□□□ -0.03
PNKP-212ENST00000599454 TMEM182Q6ZP80 229 aaPredicted RBP14.84□□□□□ -0.03
PNKP-212ENST00000599454 BAP18Q8IXM2 172 aa14.84□□□□□ -0.03
PNKP-212ENST00000599454 ZNF738Q8NE65 137 aa14.84□□□□□ -0.03
PNKP-212ENST00000599454 SOSTQ9BQB4 213 aa14.84□□□□□ -0.03
PNKP-212ENST00000599454 BCL7BQ9BQE9 202 aa14.84□□□□□ -0.03
PNKP-212ENST00000599454 FABP12A6NFH5 140 aa14.83□□□□□ -0.04
PNKP-212ENST00000599454 H3BRN7 92 aa14.83□□□□□ -0.04
PNKP-212ENST00000599454 WRBO00258 174 aa14.83□□□□□ -0.04
PNKP-212ENST00000599454 VAMP1P23763 118 aa14.83□□□□□ -0.04
PNKP-212ENST00000599454 FGL1Q08830 312 aa14.83□□□□□ -0.04
PNKP-212ENST00000599454 RNF182Q8N6D2 247 aa14.83□□□□□ -0.04
PNKP-212ENST00000599454 TAS2R60P59551 318 aa14.82□□□□□ -0.04
PNKP-212ENST00000599454 AP3S2P59780 193 aa14.82□□□□□ -0.04
PNKP-212ENST00000599454 RAP2BP61225 183 aa14.82□□□□□ -0.04
PNKP-212ENST00000599454 SPANXN5Q5MJ07 72 aa14.82□□□□□ -0.04
PNKP-212ENST00000599454 IGFL4Q6B9Z1 124 aa14.82□□□□□ -0.04
PNKP-212ENST00000599454 ACOT7LQ6ZUV0 252 aa14.82□□□□□ -0.04
PNKP-212ENST00000599454 TMEM144Q7Z5S9 345 aa14.82□□□□□ -0.04
PNKP-212ENST00000599454 C16orf74Q96GX8 76 aa14.82□□□□□ -0.04
PNKP-212ENST00000599454 LINC01587Q99440 93 aa14.82□□□□□ -0.04
PNKP-212ENST00000599454 SHANK2-AS3Q9BTD1 123 aa14.82□□□□□ -0.04
PNKP-212ENST00000599454 SLC25A39Q9BZJ4 359 aaPredicted RBP14.82□□□□□ -0.04
PNKP-212ENST00000599454 STRAPQ9Y3F4 350 aaKnown RBP14.82□□□□□ -0.04
PNKP-212ENST00000599454 TRAV12-2A0A075B6T6 113 aa14.81□□□□□ -0.04
PNKP-212ENST00000599454 AZU1P20160 251 aa14.81□□□□□ -0.04
PNKP-212ENST00000599454 S100A7AQ86SG5 101 aa14.81□□□□□ -0.04
PNKP-212ENST00000599454 SLC25A21Q9BQT8 299 aaPredicted RBP14.81□□□□□ -0.04
PNKP-212ENST00000599454 PPP1R14DQ9NXH3 145 aa14.81□□□□□ -0.04
PNKP-212ENST00000599454 HIGD1AQ9Y241 93 aa14.81□□□□□ -0.04
PNKP-212ENST00000599454 LINC00588Q9Y4M8 146 aa14.81□□□□□ -0.04
PNKP-212ENST00000599454 SFT2D2O95562 160 aa14.8□□□□□ -0.04
PNKP-212ENST00000599454 IL5P05113 134 aa14.8□□□□□ -0.04
PNKP-212ENST00000599454 TNFSF8P32971 234 aa14.8□□□□□ -0.04
PNKP-212ENST00000599454 TMBIM6P55061 237 aa14.8□□□□□ -0.04
PNKP-212ENST00000599454 PLP1P60201 277 aa14.8□□□□□ -0.04
PNKP-212ENST00000599454 RHOBP62745 196 aa14.8□□□□□ -0.04
PNKP-212ENST00000599454 HIST1H1AQ02539 215 aaPredicted RBP14.8□□□□□ -0.04
PNKP-212ENST00000599454 FCN2Q15485 313 aa14.8□□□□□ -0.04
PNKP-212ENST00000599454 CYP2G1PQ6ZSU1 146 aa14.8□□□□□ -0.04
PNKP-212ENST00000599454 MAPKAPK5-AS1Q8N8E1 139 aa14.8□□□□□ -0.04
PNKP-212ENST00000599454 OR8A1Q8NGG7 326 aa14.8□□□□□ -0.04
PNKP-212ENST00000599454 RNF24Q9Y225 148 aa14.8□□□□□ -0.04
PNKP-212ENST00000599454 TIMM8BQ9Y5J9 83 aaPredicted RBP14.8□□□□□ -0.04
PNKP-212ENST00000599454 A0A087X0K7 114 aa14.79□□□□□ -0.04
PNKP-212ENST00000599454 HYPMO75409 117 aa14.79□□□□□ -0.04
PNKP-212ENST00000599454 CXCL3P19876 107 aa14.79□□□□□ -0.04
PNKP-212ENST00000599454 SELENOTP62341 195 aa14.79□□□□□ -0.04
PNKP-212ENST00000599454 CLINT1Q14677 625 aa14.79□□□□□ -0.04
PNKP-212ENST00000599454 ZNF493Q6ZR52 646 aa14.79□□□□□ -0.04
PNKP-212ENST00000599454 TOMM5Q8N4H5 51 aa14.79□□□□□ -0.04
PNKP-212ENST00000599454 RNF141Q8WVD5 230 aa14.79□□□□□ -0.04
PNKP-212ENST00000599454 DEDD2Q8WXF8 326 aa14.79□□□□□ -0.04
PNKP-212ENST00000599454 SLIRPQ9GZT3 109 aaKnown RBP14.79□□□□□ -0.04
PNKP-212ENST00000599454 H3BP45 60 aa14.78□□□□□ -0.04
PNKP-212ENST00000599454 PSG3Q16557 428 aa14.78□□□□□ -0.04
PNKP-212ENST00000599454 TRIM63Q969Q1 353 aa14.78□□□□□ -0.04
PNKP-212ENST00000599454 SMCO3A2RU48 225 aa14.77□□□□□ -0.05
PNKP-212ENST00000599454 HOXB5P09067 269 aa14.77□□□□□ -0.05
PNKP-212ENST00000599454 CDKN1BP46527 198 aa14.77□□□□□ -0.05
PNKP-212ENST00000599454 PPP1R1AQ13522 171 aa14.77□□□□□ -0.05
PNKP-212ENST00000599454 SSX7Q7RTT5 188 aa14.77□□□□□ -0.05
PNKP-212ENST00000599454 OR10J6PQ8NGY7 276 aa14.77□□□□□ -0.05
PNKP-212ENST00000599454 LRRC20Q8TCA0 184 aa14.77□□□□□ -0.05
PNKP-212ENST00000599454 TMEM263Q8WUH6 116 aaKnown RBP14.77□□□□□ -0.05
PNKP-212ENST00000599454 LRP1BQ9NZR2 4599 aa14.76□□□□□ -0.05
PNKP-212ENST00000599454 OR5G3P0C626 314 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms