RNA–Protein interactions for RNA: ENST00000599342.5

VRK3-216, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 795 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-216ENST00000599342 C20orf173Q96LM9 149 aa7.01□□□□□ -1.29
VRK3-216ENST00000599342 SCRT1Q9BWW7 348 aa7.01□□□□□ -1.29
VRK3-216ENST00000599342 DKK2Q9UBU2 259 aa7.01□□□□□ -1.29
VRK3-216ENST00000599342 HIGD1AQ9Y241 93 aa7.01□□□□□ -1.29
VRK3-216ENST00000599342 LOC102723971A0A1B0GUV8 181 aa7□□□□□ -1.29
VRK3-216ENST00000599342 CENPXA8MT69 81 aa7□□□□□ -1.29
VRK3-216ENST00000599342 H3BRN7 92 aa7□□□□□ -1.29
VRK3-216ENST00000599342 DUSP14O95147 198 aaKnown RBP7□□□□□ -1.29
VRK3-216ENST00000599342 SCGB1D2O95969 90 aa7□□□□□ -1.29
VRK3-216ENST00000599342 OR4E1P0C645 316 aa7□□□□□ -1.29
VRK3-216ENST00000599342 LINC00869P0C866 280 aa7□□□□□ -1.29
VRK3-216ENST00000599342 HTN3P15516 51 aa7□□□□□ -1.29
VRK3-216ENST00000599342 RPL7P18124 248 aaKnown RBP7□□□□□ -1.29
VRK3-216ENST00000599342 C4orf46Q504U0 113 aa7□□□□□ -1.29
VRK3-216ENST00000599342 TMEM182Q6ZP80 229 aaPredicted RBP7□□□□□ -1.29
VRK3-216ENST00000599342 C1orf158Q8N1D5 194 aa7□□□□□ -1.29
VRK3-216ENST00000599342 ZNF738Q8NE65 137 aa7□□□□□ -1.29
VRK3-216ENST00000599342 FAM210BQ96KR6 192 aa7□□□□□ -1.29
VRK3-216ENST00000599342 SLC25A39Q9BZJ4 359 aaPredicted RBP7□□□□□ -1.29
VRK3-216ENST00000599342 RBM38Q9H0Z9 239 aaKnown RBP7□□□□□ -1.29
VRK3-216ENST00000599342 YTHDF2Q9Y5A9 579 aaKnown RBP7□□□□□ -1.29
VRK3-216ENST00000599342 LINC00854A0A1B0GVQ3 168 aa6.99□□□□□ -1.29
VRK3-216ENST00000599342 ZNF701M0R085 212 aaPredicted RBP6.99□□□□□ -1.29
VRK3-216ENST00000599342 HYPMO75409 117 aa6.99□□□□□ -1.29
VRK3-216ENST00000599342 INSP01308 110 aa6.99□□□□□ -1.29
VRK3-216ENST00000599342 OR5G3P0C626 314 aa6.99□□□□□ -1.29
VRK3-216ENST00000599342 CNN1P51911 297 aaKnown RBP6.99□□□□□ -1.29
VRK3-216ENST00000599342 DAD1P61803 113 aa6.99□□□□□ -1.29
VRK3-216ENST00000599342 RRAS2P62070 204 aaPredicted RBP6.99□□□□□ -1.29
VRK3-216ENST00000599342 SELENOTP62341 195 aa6.99□□□□□ -1.29
VRK3-216ENST00000599342 DLK1P80370 383 aa6.99□□□□□ -1.29
VRK3-216ENST00000599342 OXA1LQ15070 435 aa6.99□□□□□ -1.29
VRK3-216ENST00000599342 BAK1Q16611 211 aa6.99□□□□□ -1.29
VRK3-216ENST00000599342 RNF182Q8N6D2 247 aa6.99□□□□□ -1.29
VRK3-216ENST00000599342 OR10P1Q8NGE3 313 aa6.99□□□□□ -1.29
VRK3-216ENST00000599342 LRRC20Q8TCA0 184 aa6.99□□□□□ -1.29
VRK3-216ENST00000599342 SMIM8Q96KF7 97 aa6.99□□□□□ -1.29
VRK3-216ENST00000599342 IGF2BP2-AS1Q96M15 143 aa6.99□□□□□ -1.29
VRK3-216ENST00000599342 SHANK2-AS3Q9BTD1 123 aa6.99□□□□□ -1.29
VRK3-216ENST00000599342 MGAT4CQ9UBM8 478 aa6.99□□□□□ -1.29
VRK3-216ENST00000599342 FLVCR2Q9UPI3 526 aa6.99□□□□□ -1.29
VRK3-216ENST00000599342 RNF24Q9Y225 148 aa6.99□□□□□ -1.29
VRK3-216ENST00000599342 DNAH10Q8IVF4 4471 aa6.99□□□□□ -1.29
VRK3-216ENST00000599342 DNAH6Q9C0G6 4158 aa6.98□□□□□ -1.29
VRK3-216ENST00000599342 A8MTW9 85 aa6.98□□□□□ -1.29
VRK3-216ENST00000599342 M0R2N4 97 aa6.98□□□□□ -1.29
VRK3-216ENST00000599342 M0R2Z0 102 aa6.98□□□□□ -1.29
VRK3-216ENST00000599342 METTL15P1P0C7V9 234 aa6.98□□□□□ -1.29
VRK3-216ENST00000599342 ANXA7P20073 488 aaKnown RBP6.98□□□□□ -1.29
VRK3-216ENST00000599342 B2MP61769 119 aa6.98□□□□□ -1.29
VRK3-216ENST00000599342 SPINK13Q1W4C9 94 aa6.98□□□□□ -1.29
VRK3-216ENST00000599342 IAH1Q2TAA2 248 aaPredicted RBP6.98□□□□□ -1.29
VRK3-216ENST00000599342 IGFL4Q6B9Z1 124 aa6.98□□□□□ -1.29
VRK3-216ENST00000599342 TEPPQ6URK8 271 aa6.98□□□□□ -1.29
VRK3-216ENST00000599342 AMTNQ6UX39 209 aa6.98□□□□□ -1.29
VRK3-216ENST00000599342 OR11H7Q8NGC8 314 aa6.98□□□□□ -1.29
VRK3-216ENST00000599342 UHRF2Q96PU4 802 aa6.98□□□□□ -1.29
VRK3-216ENST00000599342 NPVFQ9HCQ7 196 aa6.98□□□□□ -1.29
VRK3-216ENST00000599342 PPP1R14DQ9NXH3 145 aa6.98□□□□□ -1.29
VRK3-216ENST00000599342 TRAV8-2A0A0B4J237 113 aa6.97□□□□□ -1.29
VRK3-216ENST00000599342 PMS2P5A8MQ11 134 aa6.97□□□□□ -1.29
VRK3-216ENST00000599342 FNDC10F2Z333 226 aa6.97□□□□□ -1.29
VRK3-216ENST00000599342 BOLA2-SMG1P6H3BVE0 249 aa6.97□□□□□ -1.29
VRK3-216ENST00000599342 TSC22D2O75157 780 aa6.97□□□□□ -1.29
VRK3-216ENST00000599342 CCNKO75909 580 aa6.97□□□□□ -1.29
VRK3-216ENST00000599342 TAS2R30P59541 319 aa6.97□□□□□ -1.29
VRK3-216ENST00000599342 PLP1P60201 277 aa6.97□□□□□ -1.29
VRK3-216ENST00000599342 RHOBP62745 196 aa6.97□□□□□ -1.29
VRK3-216ENST00000599342 HIST1H1AQ02539 215 aaPredicted RBP6.97□□□□□ -1.29
VRK3-216ENST00000599342 SLC38A11Q08AI6 406 aa6.97□□□□□ -1.29
VRK3-216ENST00000599342 CNPY1Q3B7I2 92 aa6.97□□□□□ -1.29
VRK3-216ENST00000599342 TMEM14EPQ6UXP3 125 aa6.97□□□□□ -1.29
VRK3-216ENST00000599342 ZNF546Q86UE3 836 aa6.97□□□□□ -1.29
VRK3-216ENST00000599342 BAP18Q8IXM2 172 aa6.97□□□□□ -1.29
VRK3-216ENST00000599342 C17orf77Q96MU5 243 aa6.97□□□□□ -1.29
VRK3-216ENST00000599342 ARL6Q9H0F7 186 aa6.97□□□□□ -1.29
VRK3-216ENST00000599342 ARV1Q9H2C2 271 aa6.97□□□□□ -1.29
VRK3-216ENST00000599342 PLA2G2EQ9NZK7 142 aa6.97□□□□□ -1.29
VRK3-216ENST00000599342 GSKIPQ9P0R6 139 aa6.97□□□□□ -1.29
VRK3-216ENST00000599342 TRAV12-2A0A075B6T6 113 aa6.96□□□□□ -1.3
VRK3-216ENST00000599342 A0A087X0K7 114 aa6.96□□□□□ -1.3
VRK3-216ENST00000599342 LYRM9A8MSI8 78 aa6.96□□□□□ -1.3
VRK3-216ENST00000599342 ZNF705GA8MUZ8 300 aaPredicted RBP6.96□□□□□ -1.3
VRK3-216ENST00000599342 GOSR2O14653 212 aa6.96□□□□□ -1.3
VRK3-216ENST00000599342 BTCP35070 178 aa6.96□□□□□ -1.3
VRK3-216ENST00000599342 ZNF846Q147U1 533 aa6.96□□□□□ -1.3
VRK3-216ENST00000599342 LGALS9BQ3B8N2 356 aa6.96□□□□□ -1.3
VRK3-216ENST00000599342 PXDC1Q5TGL8 231 aa6.96□□□□□ -1.3
VRK3-216ENST00000599342 TMEM88Q6PEY1 159 aa6.96□□□□□ -1.3
VRK3-216ENST00000599342 ZBTB8BQ8NAP8 495 aaPredicted RBP6.96□□□□□ -1.3
VRK3-216ENST00000599342 IGLV2-18A0A075B6J9 118 aa6.95□□□□□ -1.3
VRK3-216ENST00000599342 PRSS29PA6NIE9 313 aa6.95□□□□□ -1.3
VRK3-216ENST00000599342 K7EPK0 472 aa6.95□□□□□ -1.3
VRK3-216ENST00000599342 L7N2F9 121 aa6.95□□□□□ -1.3
VRK3-216ENST00000599342 CRXO43186 299 aaPredicted RBP6.95□□□□□ -1.3
VRK3-216ENST00000599342 COX7A2P2O60397 106 aa6.95□□□□□ -1.3
VRK3-216ENST00000599342 IL7P13232 177 aa6.95□□□□□ -1.3
VRK3-216ENST00000599342 CXCL2P19875 107 aa6.95□□□□□ -1.3
VRK3-216ENST00000599342 CXCL3P19876 107 aa6.95□□□□□ -1.3
VRK3-216ENST00000599342 VAMP2P63027 116 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms