RNA–Protein interactions for RNA: ENST00000599165.5

LIG1-217, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-217ENST00000599165 ZNF705AQ6ZN79 300 aaPredicted RBP8.75□□□□□ -1.01
LIG1-217ENST00000599165 OR10P1Q8NGE3 313 aa8.75□□□□□ -1.01
LIG1-217ENST00000599165 S100ZQ8WXG8 99 aa8.75□□□□□ -1.01
LIG1-217ENST00000599165 C2orf50Q96LR7 162 aa8.75□□□□□ -1.01
LIG1-217ENST00000599165 MGST2Q99735 147 aa8.75□□□□□ -1.01
LIG1-217ENST00000599165 TMEM147Q9BVK8 224 aa8.75□□□□□ -1.01
LIG1-217ENST00000599165 SLC35B3Q9H1N7 401 aa8.75□□□□□ -1.01
LIG1-217ENST00000599165 NPVFQ9HCQ7 196 aa8.75□□□□□ -1.01
LIG1-217ENST00000599165 PTTG2Q9NZH5 202 aa8.75□□□□□ -1.01
LIG1-217ENST00000599165 CELA1Q9UNI1 258 aa8.75□□□□□ -1.01
LIG1-217ENST00000599165 LSM5Q9Y4Y9 91 aaKnown RBP8.75□□□□□ -1.01
LIG1-217ENST00000599165 FAM240BA0A1B0GVZ2 78 aa8.74□□□□□ -1.01
LIG1-217ENST00000599165 FAM24AA6NFZ4 105 aa8.74□□□□□ -1.01
LIG1-217ENST00000599165 ZNF705FA8MVS1 300 aaPredicted RBP8.74□□□□□ -1.01
LIG1-217ENST00000599165 FAM25EA8MYX2 175 aa8.74□□□□□ -1.01
LIG1-217ENST00000599165 ZNF705DP0CH99 300 aaPredicted RBP8.74□□□□□ -1.01
LIG1-217ENST00000599165 ZNF705BP0CI00 300 aaPredicted RBP8.74□□□□□ -1.01
LIG1-217ENST00000599165 ID1P41134 155 aa8.74□□□□□ -1.01
LIG1-217ENST00000599165 GALR1P47211 349 aa8.74□□□□□ -1.01
LIG1-217ENST00000599165 FAM78BQ5VT40 261 aa8.74□□□□□ -1.01
LIG1-217ENST00000599165 MORN5Q5VZ52 161 aa8.74□□□□□ -1.01
LIG1-217ENST00000599165 GGACTQ9BVM4 153 aa8.74□□□□□ -1.01
LIG1-217ENST00000599165 HRH4Q9H3N8 390 aa8.74□□□□□ -1.01
LIG1-217ENST00000599165 FRAS1Q86XX4 4008 aa8.73□□□□□ -1.01
LIG1-217ENST00000599165 IGSF23A1L1A6 192 aa8.73□□□□□ -1.01
LIG1-217ENST00000599165 C5orf51A6NDU8 294 aa8.73□□□□□ -1.01
LIG1-217ENST00000599165 AGPAT2O15120 278 aa8.73□□□□□ -1.01
LIG1-217ENST00000599165 HYPMO75409 117 aa8.73□□□□□ -1.01
LIG1-217ENST00000599165 HLA-DMBP28068 263 aa8.73□□□□□ -1.01
LIG1-217ENST00000599165 MEOX2P50222 304 aa8.73□□□□□ -1.01
LIG1-217ENST00000599165 SELENOTP62341 195 aa8.73□□□□□ -1.01
LIG1-217ENST00000599165 RAB32Q13637 225 aa8.73□□□□□ -1.01
LIG1-217ENST00000599165 VWC2Q2TAL6 325 aa8.73□□□□□ -1.01
LIG1-217ENST00000599165 TEPPQ6URK8 271 aa8.73□□□□□ -1.01
LIG1-217ENST00000599165 C1orf158Q8N1D5 194 aa8.73□□□□□ -1.01
LIG1-217ENST00000599165 RNF182Q8N6D2 247 aa8.73□□□□□ -1.01
LIG1-217ENST00000599165 TMEM37Q8WXS4 190 aa8.73□□□□□ -1.01
LIG1-217ENST00000599165 C16orf92Q96LL3 132 aa8.73□□□□□ -1.01
LIG1-217ENST00000599165 HIGD1AQ9Y241 93 aa8.73□□□□□ -1.01
LIG1-217ENST00000599165 A0A087X0K7 114 aa8.72□□□□□ -1.01
LIG1-217ENST00000599165 CST7O76096 145 aa8.72□□□□□ -1.01
LIG1-217ENST00000599165 OR5G3P0C626 314 aa8.72□□□□□ -1.01
LIG1-217ENST00000599165 PRB4P10163 310 aaPredicted RBP8.72□□□□□ -1.01
LIG1-217ENST00000599165 ZNF846Q147U1 533 aa8.72□□□□□ -1.01
LIG1-217ENST00000599165 MZT2BQ6NZ67 158 aa8.72□□□□□ -1.01
LIG1-217ENST00000599165 Q6ZTC4 211 aa8.72□□□□□ -1.01
LIG1-217ENST00000599165 NRARPQ7Z6K4 114 aa8.72□□□□□ -1.01
LIG1-217ENST00000599165 TMEM252Q8N6L7 170 aa8.72□□□□□ -1.01
LIG1-217ENST00000599165 OR4B1Q8NGF8 309 aa8.72□□□□□ -1.01
LIG1-217ENST00000599165 GPR82Q96P67 336 aa8.72□□□□□ -1.01
LIG1-217ENST00000599165 NEU1Q99519 415 aa8.72□□□□□ -1.01
LIG1-217ENST00000599165 C1QTNF4Q9BXJ3 329 aa8.72□□□□□ -1.01
LIG1-217ENST00000599165 MFFQ9GZY8 342 aa8.72□□□□□ -1.01
LIG1-217ENST00000599165 ARL6Q9H0F7 186 aa8.72□□□□□ -1.01
LIG1-217ENST00000599165 ARV1Q9H2C2 271 aa8.72□□□□□ -1.01
LIG1-217ENST00000599165 LYRM2Q9NU23 88 aaPredicted RBP8.72□□□□□ -1.01
LIG1-217ENST00000599165 MGAT4CQ9UBM8 478 aa8.72□□□□□ -1.01
LIG1-217ENST00000599165 WDR83OSQ9Y284 106 aa8.72□□□□□ -1.01
LIG1-217ENST00000599165 KLK5Q9Y337 293 aaPredicted RBP8.72□□□□□ -1.01
LIG1-217ENST00000599165 CRXO43186 299 aaPredicted RBP8.71□□□□□ -1.02
LIG1-217ENST00000599165 SIX6O95475 246 aa8.71□□□□□ -1.02
LIG1-217ENST00000599165 LY6G6CO95867 125 aa8.71□□□□□ -1.02
LIG1-217ENST00000599165 CAV2P51636 162 aa8.71□□□□□ -1.02
LIG1-217ENST00000599165 RAP2BP61225 183 aa8.71□□□□□ -1.02
LIG1-217ENST00000599165 NUTF2P61970 127 aaKnown RBP8.71□□□□□ -1.02
LIG1-217ENST00000599165 PRR20EP86478 221 aa8.71□□□□□ -1.02
LIG1-217ENST00000599165 PRR20CP86479 221 aa8.71□□□□□ -1.02
LIG1-217ENST00000599165 PRR20DP86480 221 aa8.71□□□□□ -1.02
LIG1-217ENST00000599165 PRR20BP86481 221 aa8.71□□□□□ -1.02
LIG1-217ENST00000599165 PRR20AP86496 221 aa8.71□□□□□ -1.02
LIG1-217ENST00000599165 C12orf74Q32Q52 190 aa8.71□□□□□ -1.02
LIG1-217ENST00000599165 SAMD13Q5VXD3 122 aa8.71□□□□□ -1.02
LIG1-217ENST00000599165 ZNF767PQ75MW2 155 aa8.71□□□□□ -1.02
LIG1-217ENST00000599165 ZNF546Q86UE3 836 aa8.71□□□□□ -1.02
LIG1-217ENST00000599165 RPRMQ9NS64 109 aa8.71□□□□□ -1.02
LIG1-217ENST00000599165 APLNQ9ULZ1 77 aa8.71□□□□□ -1.02
LIG1-217ENST00000599165 H0YIZ8 118 aa8.7□□□□□ -1.02
LIG1-217ENST00000599165 L7N2F9 121 aa8.7□□□□□ -1.02
LIG1-217ENST00000599165 RPL7P18124 248 aaKnown RBP8.7□□□□□ -1.02
LIG1-217ENST00000599165 CXCL3P19876 107 aa8.7□□□□□ -1.02
LIG1-217ENST00000599165 BCAP31P51572 246 aa8.7□□□□□ -1.02
LIG1-217ENST00000599165 CNN1P51911 297 aaKnown RBP8.7□□□□□ -1.02
LIG1-217ENST00000599165 S100A10P60903 97 aa8.7□□□□□ -1.02
LIG1-217ENST00000599165 VAMP2P63027 116 aa8.7□□□□□ -1.02
LIG1-217ENST00000599165 PSG9Q00887 426 aa8.7□□□□□ -1.02
LIG1-217ENST00000599165 SPATA31B1PQ5VZV4 182 aa8.7□□□□□ -1.02
LIG1-217ENST00000599165 MIC13Q5XKP0 118 aa8.7□□□□□ -1.02
LIG1-217ENST00000599165 LINC00305Q7Z4B0 112 aa8.7□□□□□ -1.02
LIG1-217ENST00000599165 RPP25LQ8N5L8 163 aaKnown RBP8.7□□□□□ -1.02
LIG1-217ENST00000599165 OR11H7Q8NGC8 314 aa8.7□□□□□ -1.02
LIG1-217ENST00000599165 SLC17A3O00476 420 aa8.69□□□□□ -1.02
LIG1-217ENST00000599165 GOSR2O14653 212 aa8.69□□□□□ -1.02
LIG1-217ENST00000599165 SNRPCP09234 159 aaKnown RBP8.69□□□□□ -1.02
LIG1-217ENST00000599165 SULT1A1P50225 295 aa8.69□□□□□ -1.02
LIG1-217ENST00000599165 OPCMLQ14982 345 aa8.69□□□□□ -1.02
LIG1-217ENST00000599165 PXDC1Q5TGL8 231 aa8.69□□□□□ -1.02
LIG1-217ENST00000599165 EBLN2Q6P2I7 272 aa8.69□□□□□ -1.02
LIG1-217ENST00000599165 ENKURQ8TC29 256 aa8.69□□□□□ -1.02
LIG1-217ENST00000599165 MARVELD1Q9BSK0 173 aa8.69□□□□□ -1.02
LIG1-217ENST00000599165 M0R2Z0 102 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms