RNA–Protein interactions for RNA: ENST00000598570.5

USHBP1-209, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 3

Gene USHBP1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-209ENST00000598570 RNF24Q9Y225 148 aa12.92□□□□□ -0.34
USHBP1-209ENST00000598570 A0A087X0K7 114 aa12.91□□□□□ -0.34
USHBP1-209ENST00000598570 A8MTW9 85 aa12.91□□□□□ -0.34
USHBP1-209ENST00000598570 SPRY2O43597 315 aa12.91□□□□□ -0.34
USHBP1-209ENST00000598570 RPL35AP18077 110 aaKnown RBP12.91□□□□□ -0.34
USHBP1-209ENST00000598570 GALR1P47211 349 aa12.91□□□□□ -0.34
USHBP1-209ENST00000598570 CAMLGP49069 296 aa12.91□□□□□ -0.34
USHBP1-209ENST00000598570 RAB31Q13636 194 aa12.91□□□□□ -0.34
USHBP1-209ENST00000598570 OXA1LQ15070 435 aa12.91□□□□□ -0.34
USHBP1-209ENST00000598570 TMEM41BQ5BJD5 291 aa12.91□□□□□ -0.34
USHBP1-209ENST00000598570 SCRT1Q9BWW7 348 aa12.91□□□□□ -0.34
USHBP1-209ENST00000598570 ARL6Q9H0F7 186 aa12.91□□□□□ -0.34
USHBP1-209ENST00000598570 TENM2Q9NT68 2774 aa12.91□□□□□ -0.34
USHBP1-209ENST00000598570 H3BMM0 161 aa12.9□□□□□ -0.34
USHBP1-209ENST00000598570 SPP1P10451 314 aa12.9□□□□□ -0.34
USHBP1-209ENST00000598570 RAP2BP61225 183 aa12.9□□□□□ -0.34
USHBP1-209ENST00000598570 OPCMLQ14982 345 aa12.9□□□□□ -0.34
USHBP1-209ENST00000598570 PSMG4Q5JS54 123 aa12.9□□□□□ -0.34
USHBP1-209ENST00000598570 MORN3Q6PF18 240 aaPredicted RBP12.9□□□□□ -0.34
USHBP1-209ENST00000598570 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.9□□□□□ -0.34
USHBP1-209ENST00000598570 CSNK1G2-AS1Q8NCQ2 148 aa12.9□□□□□ -0.34
USHBP1-209ENST00000598570 OR11H7Q8NGC8 314 aa12.9□□□□□ -0.34
USHBP1-209ENST00000598570 MUC7Q8TAX7 377 aa12.9□□□□□ -0.34
USHBP1-209ENST00000598570 ASB13Q8WXK3 278 aa12.9□□□□□ -0.34
USHBP1-209ENST00000598570 ARV1Q9H2C2 271 aa12.9□□□□□ -0.34
USHBP1-209ENST00000598570 DNAJC4Q9NNZ3 241 aa12.9□□□□□ -0.34
USHBP1-209ENST00000598570 HLA-DRB4P13762 266 aa12.89□□□□□ -0.35
USHBP1-209ENST00000598570 RPL7P18124 248 aaKnown RBP12.89□□□□□ -0.35
USHBP1-209ENST00000598570 ID1P41134 155 aa12.89□□□□□ -0.35
USHBP1-209ENST00000598570 SPATA31B1PQ5VZV4 182 aa12.89□□□□□ -0.35
USHBP1-209ENST00000598570 PPP1R14BQ96C90 147 aa12.89□□□□□ -0.35
USHBP1-209ENST00000598570 RSG1Q9BU20 258 aa12.89□□□□□ -0.35
USHBP1-209ENST00000598570 HLA-DRB4X5D2U9 266 aa12.89□□□□□ -0.35
USHBP1-209ENST00000598570 TRAV8-2A0A0B4J237 113 aa12.88□□□□□ -0.35
USHBP1-209ENST00000598570 KNCNA6PVL3 124 aa12.88□□□□□ -0.35
USHBP1-209ENST00000598570 PET100P0DJ07 73 aa12.88□□□□□ -0.35
USHBP1-209ENST00000598570 RGS21Q2M5E4 152 aa12.88□□□□□ -0.35
USHBP1-209ENST00000598570 STHQ8IWL8 128 aa12.88□□□□□ -0.35
USHBP1-209ENST00000598570 OR5C1Q8NGR4 320 aa12.88□□□□□ -0.35
USHBP1-209ENST00000598570 UHRF2Q96PU4 802 aa12.88□□□□□ -0.35
USHBP1-209ENST00000598570 SAV1Q9H4B6 383 aaPredicted RBP12.88□□□□□ -0.35
USHBP1-209ENST00000598570 DOK5Q9P104 306 aa12.88□□□□□ -0.35
USHBP1-209ENST00000598570 KMT2CQ8NEZ4 4911 aaKnown RBP12.87□□□□□ -0.35
USHBP1-209ENST00000598570 OR5G3P0C626 314 aa12.87□□□□□ -0.35
USHBP1-209ENST00000598570 FCN2Q15485 313 aa12.87□□□□□ -0.35
USHBP1-209ENST00000598570 DEFB135Q30KP9 77 aa12.87□□□□□ -0.35
USHBP1-209ENST00000598570 LRRC37A5PQ49AS3 106 aa12.87□□□□□ -0.35
USHBP1-209ENST00000598570 ACTL10Q5JWF8 245 aa12.87□□□□□ -0.35
USHBP1-209ENST00000598570 MIC13Q5XKP0 118 aa12.87□□□□□ -0.35
USHBP1-209ENST00000598570 FOXI2Q6ZQN5 318 aa12.87□□□□□ -0.35
USHBP1-209ENST00000598570 C20orf173Q96LM9 149 aa12.87□□□□□ -0.35
USHBP1-209ENST00000598570 PARD6GQ9BYG4 376 aaPredicted RBP12.87□□□□□ -0.35
USHBP1-209ENST00000598570 SLC25A22Q9H936 323 aa12.87□□□□□ -0.35
USHBP1-209ENST00000598570 SLC39A9Q9NUM3 307 aa12.87□□□□□ -0.35
USHBP1-209ENST00000598570 MORN5Q5VZ52 161 aa12.86□□□□□ -0.35
USHBP1-209ENST00000598570 LINC00305Q7Z4B0 112 aa12.86□□□□□ -0.35
USHBP1-209ENST00000598570 NPCDR1Q9BY65 106 aa12.86□□□□□ -0.35
USHBP1-209ENST00000598570 MED28Q9H204 178 aa12.86□□□□□ -0.35
USHBP1-209ENST00000598570 HSPB11Q9Y547 144 aa12.86□□□□□ -0.35
USHBP1-209ENST00000598570 A0A0J9YX75 114 aa12.85□□□□□ -0.35
USHBP1-209ENST00000598570 UBE2L5PA0A1B0GUS4 154 aa12.85□□□□□ -0.35
USHBP1-209ENST00000598570 IGLC2P0DOY2 106 aa12.85□□□□□ -0.35
USHBP1-209ENST00000598570 CXCL2P19875 107 aa12.85□□□□□ -0.35
USHBP1-209ENST00000598570 RPL12P30050 165 aaKnown RBP12.85□□□□□ -0.35
USHBP1-209ENST00000598570 CASC10Q5T4H9 136 aa12.85□□□□□ -0.35
USHBP1-209ENST00000598570 GDF5OSQ5U4N7 250 aa12.85□□□□□ -0.35
USHBP1-209ENST00000598570 C10orf113Q5VZT2 155 aa12.85□□□□□ -0.35
USHBP1-209ENST00000598570 Q6ZRG5 221 aa12.85□□□□□ -0.35
USHBP1-209ENST00000598570 PFDN5Q99471 154 aa12.85□□□□□ -0.35
USHBP1-209ENST00000598570 WDR61Q9GZS3 305 aaKnown RBP12.85□□□□□ -0.35
USHBP1-209ENST00000598570 MBD2Q9UBB5 411 aa12.85□□□□□ -0.35
USHBP1-209ENST00000598570 ZNF705EA8MWA4 302 aaPredicted RBP12.84□□□□□ -0.35
USHBP1-209ENST00000598570 C4BPBP20851 252 aa12.84□□□□□ -0.35
USHBP1-209ENST00000598570 FGF7P21781 194 aa12.84□□□□□ -0.35
USHBP1-209ENST00000598570 B2MP61769 119 aa12.84□□□□□ -0.35
USHBP1-209ENST00000598570 OR1L4Q8NGR5 311 aa12.84□□□□□ -0.35
USHBP1-209ENST00000598570 HRH4Q9H3N8 390 aa12.84□□□□□ -0.35
USHBP1-209ENST00000598570 PXMP4Q9Y6I8 212 aa12.84□□□□□ -0.35
USHBP1-209ENST00000598570 COX7A2P2O60397 106 aa12.83□□□□□ -0.36
USHBP1-209ENST00000598570 CA1P00915 261 aaPredicted RBP12.83□□□□□ -0.36
USHBP1-209ENST00000598570 GIPP09681 153 aaPredicted RBP12.83□□□□□ -0.36
USHBP1-209ENST00000598570 BPIFA4PQ86YQ2 179 aa12.83□□□□□ -0.36
USHBP1-209ENST00000598570 IL17DQ8TAD2 202 aa12.83□□□□□ -0.36
USHBP1-209ENST00000598570 SAT2Q96F10 170 aaPredicted RBP12.83□□□□□ -0.36
USHBP1-209ENST00000598570 C16orf92Q96LL3 132 aa12.83□□□□□ -0.36
USHBP1-209ENST00000598570 ATP5SQ99766 215 aa12.83□□□□□ -0.36
USHBP1-209ENST00000598570 RPRMQ9NS64 109 aa12.83□□□□□ -0.36
USHBP1-209ENST00000598570 TMEM14CQ9P0S9 112 aa12.83□□□□□ -0.36
USHBP1-209ENST00000598570 STARD9Q9P2P6 4700 aa12.83□□□□□ -0.36
USHBP1-209ENST00000598570 AMTNQ6UX39 209 aa12.82□□□□□ -0.36
USHBP1-209ENST00000598570 ZNF709Q8N972 641 aa12.82□□□□□ -0.36
USHBP1-209ENST00000598570 LINC00052Q96N35 136 aa12.82□□□□□ -0.36
USHBP1-209ENST00000598570 C11orf68Q9H3H3 251 aaKnown RBP12.82□□□□□ -0.36
USHBP1-209ENST00000598570 ZNF331Q9NQX6 463 aaPredicted RBP12.82□□□□□ -0.36
USHBP1-209ENST00000598570 ZNF253O75346 499 aa12.81□□□□□ -0.36
USHBP1-209ENST00000598570 DEFB1P60022 68 aa12.81□□□□□ -0.36
USHBP1-209ENST00000598570 NUTF2P61970 127 aaKnown RBP12.81□□□□□ -0.36
USHBP1-209ENST00000598570 Q5BKY6 102 aa12.81□□□□□ -0.36
USHBP1-209ENST00000598570 THAP6Q8TBB0 222 aa12.81□□□□□ -0.36
USHBP1-209ENST00000598570 AQP10Q96PS8 301 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms