RNA–Protein interactions for RNA: ENST00000598422.1

XRCC1-208, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 2

Gene XRCC1, Length 701 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-208ENST00000598422 SHANK2-AS3Q9BTD1 123 aa10.62□□□□□ -0.71
XRCC1-208ENST00000598422 GGACTQ9BVM4 153 aa10.62□□□□□ -0.71
XRCC1-208ENST00000598422 SLC25A39Q9BZJ4 359 aaPredicted RBP10.62□□□□□ -0.71
XRCC1-208ENST00000598422 RNF24Q9Y225 148 aa10.62□□□□□ -0.71
XRCC1-208ENST00000598422 X6R8D5 127 aa10.62□□□□□ -0.71
XRCC1-208ENST00000598422 K7EPK0 472 aa10.61□□□□□ -0.71
XRCC1-208ENST00000598422 GOSR2O14653 212 aa10.61□□□□□ -0.71
XRCC1-208ENST00000598422 CSNK1G2-AS1Q8NCQ2 148 aa10.61□□□□□ -0.71
XRCC1-208ENST00000598422 C2orf50Q96LR7 162 aa10.61□□□□□ -0.71
XRCC1-208ENST00000598422 ARL6Q9H0F7 186 aa10.61□□□□□ -0.71
XRCC1-208ENST00000598422 PTTG2Q9NZH5 202 aa10.61□□□□□ -0.71
XRCC1-208ENST00000598422 DEDDO75618 318 aa10.6□□□□□ -0.71
XRCC1-208ENST00000598422 UPK1BO75841 260 aa10.6□□□□□ -0.71
XRCC1-208ENST00000598422 RBMY1A1P0DJD3 496 aaKnown RBP10.6□□□□□ -0.71
XRCC1-208ENST00000598422 RBMY1CP0DJD4 496 aa10.6□□□□□ -0.71
XRCC1-208ENST00000598422 FXYD7P58549 80 aa10.6□□□□□ -0.71
XRCC1-208ENST00000598422 PLP1P60201 277 aa10.6□□□□□ -0.71
XRCC1-208ENST00000598422 RAB31Q13636 194 aa10.6□□□□□ -0.71
XRCC1-208ENST00000598422 RBMY1FQ15415 496 aaKnown RBP10.6□□□□□ -0.71
XRCC1-208ENST00000598422 UHRF2Q96PU4 802 aa10.6□□□□□ -0.71
XRCC1-208ENST00000598422 HRH4Q9H3N8 390 aa10.6□□□□□ -0.71
XRCC1-208ENST00000598422 GPN1Q9HCN4 374 aaPredicted RBP10.6□□□□□ -0.71
XRCC1-208ENST00000598422 IGHV3OR16-12A0A075B7B8 117 aa10.59□□□□□ -0.71
XRCC1-208ENST00000598422 A6NHS1 94 aa10.59□□□□□ -0.71
XRCC1-208ENST00000598422 F6UB75 175 aa10.59□□□□□ -0.71
XRCC1-208ENST00000598422 AGPAT2O15120 278 aa10.59□□□□□ -0.71
XRCC1-208ENST00000598422 PSG9Q00887 426 aa10.59□□□□□ -0.71
XRCC1-208ENST00000598422 ARL16Q0P5N6 197 aa10.59□□□□□ -0.71
XRCC1-208ENST00000598422 PXDC1Q5TGL8 231 aa10.59□□□□□ -0.71
XRCC1-208ENST00000598422 FAM78BQ5VT40 261 aa10.59□□□□□ -0.71
XRCC1-208ENST00000598422 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.59□□□□□ -0.71
XRCC1-208ENST00000598422 STX12Q86Y82 276 aa10.59□□□□□ -0.71
XRCC1-208ENST00000598422 C2CD4CQ8TF44 421 aa10.59□□□□□ -0.71
XRCC1-208ENST00000598422 C20orf173Q96LM9 149 aa10.59□□□□□ -0.71
XRCC1-208ENST00000598422 A0A0J9YX75 114 aa10.58□□□□□ -0.72
XRCC1-208ENST00000598422 C11orf94C9JXX5 98 aa10.58□□□□□ -0.72
XRCC1-208ENST00000598422 COX7A2P2O60397 106 aa10.58□□□□□ -0.72
XRCC1-208ENST00000598422 CST7O76096 145 aa10.58□□□□□ -0.72
XRCC1-208ENST00000598422 HLA-DMBP28068 263 aa10.58□□□□□ -0.72
XRCC1-208ENST00000598422 ZNF738Q8NE65 137 aa10.58□□□□□ -0.72
XRCC1-208ENST00000598422 LRRC20Q8TCA0 184 aa10.58□□□□□ -0.72
XRCC1-208ENST00000598422 CLUHP3Q96NS8 147 aa10.58□□□□□ -0.72
XRCC1-208ENST00000598422 ARV1Q9H2C2 271 aa10.58□□□□□ -0.72
XRCC1-208ENST00000598422 GOLT1BQ9Y3E0 138 aa10.58□□□□□ -0.72
XRCC1-208ENST00000598422 ALMS1Q8TCU4 4167 aa10.57□□□□□ -0.72
XRCC1-208ENST00000598422 ELOA3CA0A087WX78 387 aaPredicted RBP10.57□□□□□ -0.72
XRCC1-208ENST00000598422 FAM24AA6NFZ4 105 aa10.57□□□□□ -0.72
XRCC1-208ENST00000598422 DUSP14O95147 198 aaKnown RBP10.57□□□□□ -0.72
XRCC1-208ENST00000598422 CAMLGP49069 296 aa10.57□□□□□ -0.72
XRCC1-208ENST00000598422 ZNF709Q8N972 641 aa10.57□□□□□ -0.72
XRCC1-208ENST00000598422 MGST2Q99735 147 aa10.57□□□□□ -0.72
XRCC1-208ENST00000598422 SLC35B3Q9H1N7 401 aa10.57□□□□□ -0.72
XRCC1-208ENST00000598422 UQCC1Q9NVA1 299 aa10.57□□□□□ -0.72
XRCC1-208ENST00000598422 LYSTQ99698 3801 aa10.57□□□□□ -0.72
XRCC1-208ENST00000598422 UBE2L5PA0A1B0GUS4 154 aa10.56□□□□□ -0.72
XRCC1-208ENST00000598422 SULT1A1P50225 295 aa10.56□□□□□ -0.72
XRCC1-208ENST00000598422 HBG1P69891 147 aa10.56□□□□□ -0.72
XRCC1-208ENST00000598422 HBG2P69892 147 aa10.56□□□□□ -0.72
XRCC1-208ENST00000598422 RAB32Q13637 225 aa10.56□□□□□ -0.72
XRCC1-208ENST00000598422 IGFL4Q6B9Z1 124 aa10.56□□□□□ -0.72
XRCC1-208ENST00000598422 ZNF705AQ6ZN79 300 aaPredicted RBP10.56□□□□□ -0.72
XRCC1-208ENST00000598422 Q6ZTC4 211 aa10.56□□□□□ -0.72
XRCC1-208ENST00000598422 LINC00305Q7Z4B0 112 aa10.56□□□□□ -0.72
XRCC1-208ENST00000598422 RNF182Q8N6D2 247 aa10.56□□□□□ -0.72
XRCC1-208ENST00000598422 LYRM2Q9NU23 88 aaPredicted RBP10.56□□□□□ -0.72
XRCC1-208ENST00000598422 DNAH1Q9P2D7 4330 aa10.56□□□□□ -0.72
XRCC1-208ENST00000598422 A0A087X0K7 114 aa10.55□□□□□ -0.72
XRCC1-208ENST00000598422 TRAV8-2A0A0B4J237 113 aa10.55□□□□□ -0.72
XRCC1-208ENST00000598422 TRAV10A0A0B4J240 114 aa10.55□□□□□ -0.72
XRCC1-208ENST00000598422 TMEM189A5PLL7 270 aa10.55□□□□□ -0.72
XRCC1-208ENST00000598422 SMIM9A6NGZ8 99 aa10.55□□□□□ -0.72
XRCC1-208ENST00000598422 IGLL5B9A064 214 aa10.55□□□□□ -0.72
XRCC1-208ENST00000598422 PRAF2O60831 178 aa10.55□□□□□ -0.72
XRCC1-208ENST00000598422 S100A11P31949 105 aa10.55□□□□□ -0.72
XRCC1-208ENST00000598422 CNN1P51911 297 aaKnown RBP10.55□□□□□ -0.72
XRCC1-208ENST00000598422 EMP1P54849 157 aa10.55□□□□□ -0.72
XRCC1-208ENST00000598422 DEFA1P59665 94 aa10.55□□□□□ -0.72
XRCC1-208ENST00000598422 DEFA3P59666 94 aa10.55□□□□□ -0.72
XRCC1-208ENST00000598422 BAXQ07812 192 aa10.55□□□□□ -0.72
XRCC1-208ENST00000598422 C10orf113Q5VZT2 155 aa10.55□□□□□ -0.72
XRCC1-208ENST00000598422 Q6ZRG5 221 aa10.55□□□□□ -0.72
XRCC1-208ENST00000598422 NRARPQ7Z6K4 114 aa10.55□□□□□ -0.72
XRCC1-208ENST00000598422 C17orf77Q96MU5 243 aa10.55□□□□□ -0.72
XRCC1-208ENST00000598422 NEU1Q99519 415 aa10.55□□□□□ -0.72
XRCC1-208ENST00000598422 TMEM208Q9BTX3 173 aa10.55□□□□□ -0.72
XRCC1-208ENST00000598422 C11orf1Q9H5F2 150 aa10.55□□□□□ -0.72
XRCC1-208ENST00000598422 RFNGQ9Y644 331 aa10.55□□□□□ -0.72
XRCC1-208ENST00000598422 ZNF705FA8MVS1 300 aaPredicted RBP10.54□□□□□ -0.72
XRCC1-208ENST00000598422 HBE1P02100 147 aa10.54□□□□□ -0.72
XRCC1-208ENST00000598422 AMBPP02760 352 aa10.54□□□□□ -0.72
XRCC1-208ENST00000598422 ZNF705DP0CH99 300 aaPredicted RBP10.54□□□□□ -0.72
XRCC1-208ENST00000598422 ZNF705BP0CI00 300 aaPredicted RBP10.54□□□□□ -0.72
XRCC1-208ENST00000598422 TCTAP57738 103 aa10.54□□□□□ -0.72
XRCC1-208ENST00000598422 PATE2Q6UY27 113 aa10.54□□□□□ -0.72
XRCC1-208ENST00000598422 BPIFA4PQ86YQ2 179 aa10.54□□□□□ -0.72
XRCC1-208ENST00000598422 TMEM252Q8N6L7 170 aa10.54□□□□□ -0.72
XRCC1-208ENST00000598422 CELA1Q9UNI1 258 aa10.54□□□□□ -0.72
XRCC1-208ENST00000598422 PLECQ15149 4684 aaKnown RBP10.54□□□□□ -0.72
XRCC1-208ENST00000598422 TEX48A0A1B0GUV7 120 aa10.53□□□□□ -0.72
XRCC1-208ENST00000598422 IGSF23A1L1A6 192 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms