RNA–Protein interactions for RNA: ENST00000597180.1

IRF3-216, Transcript of interferon regulatory factor 3, humanhuman

TSL 5

Gene IRF3, Length 301 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-216ENST00000597180 THAP6Q8TBB0 222 aa13.37□□□□□ -0.27
IRF3-216ENST00000597180 UHRF2Q96PU4 802 aa13.37□□□□□ -0.27
IRF3-216ENST00000597180 SNRPD3P62318 126 aaKnown RBP13.36□□□□□ -0.27
IRF3-216ENST00000597180 CLINT1Q14677 625 aa13.36□□□□□ -0.27
IRF3-216ENST00000597180 SAMD13Q5VXD3 122 aa13.36□□□□□ -0.27
IRF3-216ENST00000597180 Q6ZRG5 221 aa13.36□□□□□ -0.27
IRF3-216ENST00000597180 TMEM37Q8WXS4 190 aa13.36□□□□□ -0.27
IRF3-216ENST00000597180 C17orf77Q96MU5 243 aa13.36□□□□□ -0.27
IRF3-216ENST00000597180 NPCDR1Q9BY65 106 aa13.36□□□□□ -0.27
IRF3-216ENST00000597180 SLC39A9Q9NUM3 307 aa13.36□□□□□ -0.27
IRF3-216ENST00000597180 RNF24Q9Y225 148 aa13.36□□□□□ -0.27
IRF3-216ENST00000597180 ELOA3CA0A087WX78 387 aaPredicted RBP13.35□□□□□ -0.27
IRF3-216ENST00000597180 COX7A2P2O60397 106 aa13.35□□□□□ -0.27
IRF3-216ENST00000597180 RPL35AP18077 110 aaKnown RBP13.35□□□□□ -0.27
IRF3-216ENST00000597180 RPL7P18124 248 aaKnown RBP13.35□□□□□ -0.27
IRF3-216ENST00000597180 PSMB3P49720 205 aa13.35□□□□□ -0.27
IRF3-216ENST00000597180 MEOX2P50222 304 aa13.35□□□□□ -0.27
IRF3-216ENST00000597180 PSMG4Q5JS54 123 aa13.35□□□□□ -0.27
IRF3-216ENST00000597180 ATP5SQ99766 215 aa13.35□□□□□ -0.27
IRF3-216ENST00000597180 WDR61Q9GZS3 305 aaKnown RBP13.35□□□□□ -0.27
IRF3-216ENST00000597180 PXMP4Q9Y6I8 212 aa13.35□□□□□ -0.27
IRF3-216ENST00000597180 UBE2CO00762 179 aa13.34□□□□□ -0.27
IRF3-216ENST00000597180 B2MP61769 119 aa13.34□□□□□ -0.27
IRF3-216ENST00000597180 FGL1Q08830 312 aa13.34□□□□□ -0.27
IRF3-216ENST00000597180 C10orf113Q5VZT2 155 aa13.34□□□□□ -0.27
IRF3-216ENST00000597180 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.34□□□□□ -0.27
IRF3-216ENST00000597180 LINC00305Q7Z4B0 112 aa13.34□□□□□ -0.27
IRF3-216ENST00000597180 OR1L4Q8NGR5 311 aa13.34□□□□□ -0.27
IRF3-216ENST00000597180 RSG1Q9BU20 258 aa13.34□□□□□ -0.27
IRF3-216ENST00000597180 RETNQ9HD89 108 aa13.34□□□□□ -0.27
IRF3-216ENST00000597180 DNAJC4Q9NNZ3 241 aa13.34□□□□□ -0.27
IRF3-216ENST00000597180 STAB2Q8WWQ8 2551 aa13.34□□□□□ -0.27
IRF3-216ENST00000597180 ISLRO14498 428 aa13.33□□□□□ -0.28
IRF3-216ENST00000597180 ID1P41134 155 aa13.33□□□□□ -0.28
IRF3-216ENST00000597180 Q6ZWC4 215 aa13.33□□□□□ -0.28
IRF3-216ENST00000597180 PFDN5Q99471 154 aa13.33□□□□□ -0.28
IRF3-216ENST00000597180 NBEAL2Q6ZNJ1 2754 aa13.32□□□□□ -0.28
IRF3-216ENST00000597180 A0A087X0K7 114 aa13.32□□□□□ -0.28
IRF3-216ENST00000597180 KNCNA6PVL3 124 aa13.32□□□□□ -0.28
IRF3-216ENST00000597180 MRPS12O15235 138 aaKnown RBP13.32□□□□□ -0.28
IRF3-216ENST00000597180 Q5BKY6 102 aa13.32□□□□□ -0.28
IRF3-216ENST00000597180 TRPT1Q86TN4 253 aaKnown RBP13.32□□□□□ -0.28
IRF3-216ENST00000597180 STHQ8IWL8 128 aa13.32□□□□□ -0.28
IRF3-216ENST00000597180 WWC2-AS2Q96NR7 200 aa13.32□□□□□ -0.28
IRF3-216ENST00000597180 CSTL1Q9H114 145 aa13.32□□□□□ -0.28
IRF3-216ENST00000597180 ATF4P18848 351 aaPredicted RBP13.31□□□□□ -0.28
IRF3-216ENST00000597180 MORN5Q5VZ52 161 aa13.31□□□□□ -0.28
IRF3-216ENST00000597180 GATAD1Q8WUU5 269 aa13.31□□□□□ -0.28
IRF3-216ENST00000597180 AQP10Q96PS8 301 aa13.31□□□□□ -0.28
IRF3-216ENST00000597180 PARD6GQ9BYG4 376 aaPredicted RBP13.31□□□□□ -0.28
IRF3-216ENST00000597180 SMIM3Q9BZL3 60 aa13.31□□□□□ -0.28
IRF3-216ENST00000597180 KCNIP2Q9NS61 270 aa13.31□□□□□ -0.28
IRF3-216ENST00000597180 TP53TG1Q9Y2A0 90 aa13.31□□□□□ -0.28
IRF3-216ENST00000597180 ACTL10Q5JWF8 245 aa13.3□□□□□ -0.28
IRF3-216ENST00000597180 ZNF709Q8N972 641 aa13.3□□□□□ -0.28
IRF3-216ENST00000597180 C16orf92Q96LL3 132 aa13.3□□□□□ -0.28
IRF3-216ENST00000597180 OVOL2Q9BRP0 275 aa13.3□□□□□ -0.28
IRF3-216ENST00000597180 WFDC1Q9HC57 220 aa13.3□□□□□ -0.28
IRF3-216ENST00000597180 IFNA5P01569 189 aa13.29□□□□□ -0.28
IRF3-216ENST00000597180 BPIFA4PQ86YQ2 179 aa13.29□□□□□ -0.28
IRF3-216ENST00000597180 OR2T35Q8NGX2 323 aa13.29□□□□□ -0.28
IRF3-216ENST00000597180 C20orf173Q96LM9 149 aa13.29□□□□□ -0.28
IRF3-216ENST00000597180 LINC00052Q96N35 136 aa13.29□□□□□ -0.28
IRF3-216ENST00000597180 TRAV8-2A0A0B4J237 113 aa13.28□□□□□ -0.28
IRF3-216ENST00000597180 C17orf112F2Z3M2 114 aa13.28□□□□□ -0.28
IRF3-216ENST00000597180 G3V3Q6 166 aa13.28□□□□□ -0.28
IRF3-216ENST00000597180 SPRY2O43597 315 aa13.28□□□□□ -0.28
IRF3-216ENST00000597180 HLA-DRB4P13762 266 aa13.28□□□□□ -0.28
IRF3-216ENST00000597180 DEFB135Q30KP9 77 aa13.28□□□□□ -0.28
IRF3-216ENST00000597180 MORN3Q6PF18 240 aaPredicted RBP13.28□□□□□ -0.28
IRF3-216ENST00000597180 FOXI2Q6ZQN5 318 aa13.28□□□□□ -0.28
IRF3-216ENST00000597180 SCGB1C1Q8TD33 95 aa13.28□□□□□ -0.28
IRF3-216ENST00000597180 RNF183Q96D59 192 aa13.28□□□□□ -0.28
IRF3-216ENST00000597180 SAV1Q9H4B6 383 aaPredicted RBP13.28□□□□□ -0.28
IRF3-216ENST00000597180 HLA-DRB4X5D2U9 266 aa13.28□□□□□ -0.28
IRF3-216ENST00000597180 TRAV5A0A0B4J249 113 aa13.27□□□□□ -0.29
IRF3-216ENST00000597180 H3BMM0 161 aa13.27□□□□□ -0.29
IRF3-216ENST00000597180 IGLC2P0DOY2 106 aa13.27□□□□□ -0.29
IRF3-216ENST00000597180 SPP1P10451 314 aa13.27□□□□□ -0.29
IRF3-216ENST00000597180 CXCL2P19875 107 aa13.27□□□□□ -0.29
IRF3-216ENST00000597180 GCSAMLQ5JQS6 135 aa13.27□□□□□ -0.29
IRF3-216ENST00000597180 EDA2RQ9HAV5 297 aa13.27□□□□□ -0.29
IRF3-216ENST00000597180 RPRMQ9NS64 109 aa13.27□□□□□ -0.29
IRF3-216ENST00000597180 CA1P00915 261 aaPredicted RBP13.26□□□□□ -0.29
IRF3-216ENST00000597180 GIG44P09565 113 aaPredicted RBP13.26□□□□□ -0.29
IRF3-216ENST00000597180 DEFB1P60022 68 aa13.26□□□□□ -0.29
IRF3-216ENST00000597180 GDF5OSQ5U4N7 250 aa13.26□□□□□ -0.29
IRF3-216ENST00000597180 SPATA31B1PQ5VZV4 182 aa13.26□□□□□ -0.29
IRF3-216ENST00000597180 LCN15Q6UWW0 184 aa13.26□□□□□ -0.29
IRF3-216ENST00000597180 CLUHP3Q96NS8 147 aa13.26□□□□□ -0.29
IRF3-216ENST00000597180 TNFSF18Q9UNG2 199 aa13.26□□□□□ -0.29
IRF3-216ENST00000597180 FXYD6-FXYD2A0A087WZ82 144 aa13.25□□□□□ -0.29
IRF3-216ENST00000597180 RNF222A6NCQ9 220 aa13.25□□□□□ -0.29
IRF3-216ENST00000597180 TMEM41BQ5BJD5 291 aa13.25□□□□□ -0.29
IRF3-216ENST00000597180 FAM78BQ5VT40 261 aa13.25□□□□□ -0.29
IRF3-216ENST00000597180 IGFL4Q6B9Z1 124 aa13.25□□□□□ -0.29
IRF3-216ENST00000597180 INO80EQ8NBZ0 244 aaPredicted RBP13.25□□□□□ -0.29
IRF3-216ENST00000597180 HRH4Q9H3N8 390 aa13.25□□□□□ -0.29
IRF3-216ENST00000597180 TMEM14CQ9P0S9 112 aa13.25□□□□□ -0.29
IRF3-216ENST00000597180 H3BQ15 152 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 140.8 ms