RNA–Protein interactions for RNA: ENST00000597023.1

PPFIA4-208, Transcript of PTPRF interacting protein alpha 4, human

TSL 4

Gene PPFIA4, Length 496 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPFIA4-208	ENST00000597023	PVALB	P20472	110 aa	Predicted RBP	11.21	□□□□□ -0.61
PPFIA4-208	ENST00000597023	EMP1	P54849	157 aa		11.21	□□□□□ -0.61
PPFIA4-208	ENST00000597023	VAMP2	P63027	116 aa		11.21	□□□□□ -0.61
PPFIA4-208	ENST00000597023	DLK1	P80370	383 aa		11.21	□□□□□ -0.61
PPFIA4-208	ENST00000597023	PRR20E	P86478	221 aa		11.21	□□□□□ -0.61
PPFIA4-208	ENST00000597023	PRR20C	P86479	221 aa		11.21	□□□□□ -0.61
PPFIA4-208	ENST00000597023	PRR20D	P86480	221 aa		11.21	□□□□□ -0.61
PPFIA4-208	ENST00000597023	PRR20B	P86481	221 aa		11.21	□□□□□ -0.61
PPFIA4-208	ENST00000597023	PRR20A	P86496	221 aa		11.21	□□□□□ -0.61
PPFIA4-208	ENST00000597023	FGL1	Q08830	312 aa		11.21	□□□□□ -0.61
PPFIA4-208	ENST00000597023	FAM78B	Q5VT40	261 aa		11.21	□□□□□ -0.61
PPFIA4-208	ENST00000597023	UNQ5830/PRO19650/PRO19816	Q6UY13	95 aa		11.21	□□□□□ -0.61
PPFIA4-208	ENST00000597023	ZBTB8B	Q8NAP8	495 aa	Predicted RBP	11.21	□□□□□ -0.61
PPFIA4-208	ENST00000597023	ZNF431	Q8TF32	576 aa	Predicted RBP	11.21	□□□□□ -0.61
PPFIA4-208	ENST00000597023	APLN	Q9ULZ1	77 aa		11.21	□□□□□ -0.61
PPFIA4-208	ENST00000597023	PRB4	P10163	310 aa	Predicted RBP	11.2	□□□□□ -0.62
PPFIA4-208	ENST00000597023	RAP2B	P61225	183 aa		11.2	□□□□□ -0.62
PPFIA4-208	ENST00000597023	RAB31	Q13636	194 aa		11.2	□□□□□ -0.62
PPFIA4-208	ENST00000597023	C12orf74	Q32Q52	190 aa		11.2	□□□□□ -0.62
PPFIA4-208	ENST00000597023	EBLN2	Q6P2I7	272 aa		11.2	□□□□□ -0.62
PPFIA4-208	ENST00000597023	ZNF709	Q8N972	641 aa		11.2	□□□□□ -0.62
PPFIA4-208	ENST00000597023	CLUHP3	Q96NS8	147 aa		11.2	□□□□□ -0.62
PPFIA4-208	ENST00000597023	TRAV10	A0A0B4J240	114 aa		11.19	□□□□□ -0.62
PPFIA4-208	ENST00000597023		A0A0J9YX75	114 aa		11.19	□□□□□ -0.62
PPFIA4-208	ENST00000597023	FAM25E	A8MYX2	175 aa		11.19	□□□□□ -0.62
PPFIA4-208	ENST00000597023	C11orf94	C9JXX5	98 aa		11.19	□□□□□ -0.62
PPFIA4-208	ENST00000597023	H2AFB2	P0C5Z0	115 aa		11.19	□□□□□ -0.62
PPFIA4-208	ENST00000597023	OR5G3	P0C626	314 aa		11.19	□□□□□ -0.62
PPFIA4-208	ENST00000597023	LINC00869	P0C866	280 aa		11.19	□□□□□ -0.62
PPFIA4-208	ENST00000597023	ZNF705D	P0CH99	300 aa	Predicted RBP	11.19	□□□□□ -0.62
PPFIA4-208	ENST00000597023	ZNF705B	P0CI00	300 aa	Predicted RBP	11.19	□□□□□ -0.62
PPFIA4-208	ENST00000597023	ARL16	Q0P5N6	197 aa		11.19	□□□□□ -0.62
PPFIA4-208	ENST00000597023	TEPP	Q6URK8	271 aa		11.19	□□□□□ -0.62
PPFIA4-208	ENST00000597023	TMEM14EP	Q6UXP3	125 aa		11.19	□□□□□ -0.62
PPFIA4-208	ENST00000597023	RNF182	Q8N6D2	247 aa		11.19	□□□□□ -0.62
PPFIA4-208	ENST00000597023	UHRF2	Q96PU4	802 aa		11.19	□□□□□ -0.62
PPFIA4-208	ENST00000597023	SEC22C	Q9BRL7	303 aa		11.19	□□□□□ -0.62
PPFIA4-208	ENST00000597023	SLC25A39	Q9BZJ4	359 aa	Predicted RBP	11.19	□□□□□ -0.62
PPFIA4-208	ENST00000597023	GPN1	Q9HCN4	374 aa	Predicted RBP	11.19	□□□□□ -0.62
PPFIA4-208	ENST00000597023	RPRM	Q9NS64	109 aa		11.19	□□□□□ -0.62
PPFIA4-208	ENST00000597023	NUDT15	Q9NV35	164 aa		11.19	□□□□□ -0.62
PPFIA4-208	ENST00000597023	HIGD1A	Q9Y241	93 aa		11.19	□□□□□ -0.62
PPFIA4-208	ENST00000597023	RCL1	Q9Y2P8	373 aa	Known RBP	11.19	□□□□□ -0.62
PPFIA4-208	ENST00000597023	C5orf51	A6NDU8	294 aa		11.18	□□□□□ -0.62
PPFIA4-208	ENST00000597023		H3BRN7	92 aa		11.18	□□□□□ -0.62
PPFIA4-208	ENST00000597023	HYPM	O75409	117 aa		11.18	□□□□□ -0.62
PPFIA4-208	ENST00000597023	MBP	P02686	304 aa	Predicted RBP	11.18	□□□□□ -0.62
PPFIA4-208	ENST00000597023	TCTA	P57738	103 aa		11.18	□□□□□ -0.62
PPFIA4-208	ENST00000597023	PSG9	Q00887	426 aa		11.18	□□□□□ -0.62
PPFIA4-208	ENST00000597023	SLC38A11	Q08AI6	406 aa		11.18	□□□□□ -0.62
PPFIA4-208	ENST00000597023	ZNF705A	Q6ZN79	300 aa	Predicted RBP	11.18	□□□□□ -0.62
PPFIA4-208	ENST00000597023	C12orf45	Q8N5I9	185 aa	Predicted RBP	11.18	□□□□□ -0.62
PPFIA4-208	ENST00000597023	BATF3	Q9NR55	127 aa		11.18	□□□□□ -0.62
PPFIA4-208	ENST00000597023	KMT2A	Q03164	3969 aa		11.18	□□□□□ -0.62
PPFIA4-208	ENST00000597023	IGHV4-4	A0A075B6R2	117 aa		11.17	□□□□□ -0.62
PPFIA4-208	ENST00000597023	TRAV8-2	A0A0B4J237	113 aa		11.17	□□□□□ -0.62
PPFIA4-208	ENST00000597023	C7orf66	A4D0T2	115 aa		11.17	□□□□□ -0.62
PPFIA4-208	ENST00000597023	ZNF705F	A8MVS1	300 aa	Predicted RBP	11.17	□□□□□ -0.62
PPFIA4-208	ENST00000597023		K7EPK0	472 aa		11.17	□□□□□ -0.62
PPFIA4-208	ENST00000597023	RPL7	P18124	248 aa	Known RBP	11.17	□□□□□ -0.62
PPFIA4-208	ENST00000597023	PLP1	P60201	277 aa		11.17	□□□□□ -0.62
PPFIA4-208	ENST00000597023	ASAH1	Q13510	395 aa		11.17	□□□□□ -0.62
PPFIA4-208	ENST00000597023	C2orf50	Q96LR7	162 aa		11.17	□□□□□ -0.62
PPFIA4-208	ENST00000597023	SHANK2-AS3	Q9BTD1	123 aa		11.17	□□□□□ -0.62
PPFIA4-208	ENST00000597023	ARL6	Q9H0F7	186 aa		11.17	□□□□□ -0.62
PPFIA4-208	ENST00000597023	PLA2G2E	Q9NZK7	142 aa		11.17	□□□□□ -0.62
PPFIA4-208	ENST00000597023	LSM5	Q9Y4Y9	91 aa	Known RBP	11.17	□□□□□ -0.62
PPFIA4-208	ENST00000597023	DEFB131B	A0A096LNP1	70 aa		11.16	□□□□□ -0.62
PPFIA4-208	ENST00000597023	SNRPC	P09234	159 aa	Known RBP	11.16	□□□□□ -0.62
PPFIA4-208	ENST00000597023	PATE2	Q6UY27	113 aa		11.16	□□□□□ -0.62
PPFIA4-208	ENST00000597023	ZNF546	Q86UE3	836 aa		11.16	□□□□□ -0.62
PPFIA4-208	ENST00000597023	C1orf158	Q8N1D5	194 aa		11.16	□□□□□ -0.62
PPFIA4-208	ENST00000597023	ENKUR	Q8TC29	256 aa		11.16	□□□□□ -0.62
PPFIA4-208	ENST00000597023	PTTG2	Q9NZH5	202 aa		11.16	□□□□□ -0.62
PPFIA4-208	ENST00000597023	VPS13D	Q5THJ4	4388 aa		11.16	□□□□□ -0.62
PPFIA4-208	ENST00000597023	SMIM9	A6NGZ8	99 aa		11.15	□□□□□ -0.62
PPFIA4-208	ENST00000597023	GOSR2	O14653	212 aa		11.15	□□□□□ -0.62
PPFIA4-208	ENST00000597023	PRM2	P04554	102 aa		11.15	□□□□□ -0.62
PPFIA4-208	ENST00000597023	BCAP31	P51572	246 aa		11.15	□□□□□ -0.62
PPFIA4-208	ENST00000597023	HBG1	P69891	147 aa		11.15	□□□□□ -0.62
PPFIA4-208	ENST00000597023	HBG2	P69892	147 aa		11.15	□□□□□ -0.62
PPFIA4-208	ENST00000597023	NEU1	Q99519	415 aa		11.15	□□□□□ -0.62
PPFIA4-208	ENST00000597023	TMEM189	A5PLL7	270 aa		11.14	□□□□□ -0.63
PPFIA4-208	ENST00000597023		A6NHS1	94 aa		11.14	□□□□□ -0.63
PPFIA4-208	ENST00000597023		M0R2Z0	102 aa		11.14	□□□□□ -0.63
PPFIA4-208	ENST00000597023	PRAF2	O60831	178 aa		11.14	□□□□□ -0.63
PPFIA4-208	ENST00000597023	RLN2	P04090	185 aa		11.14	□□□□□ -0.63
PPFIA4-208	ENST00000597023	S100A11	P31949	105 aa		11.14	□□□□□ -0.63
PPFIA4-208	ENST00000597023	CNN1	P51911	297 aa	Known RBP	11.14	□□□□□ -0.63
PPFIA4-208	ENST00000597023	DEFA1	P59665	94 aa		11.14	□□□□□ -0.63
PPFIA4-208	ENST00000597023	DEFA3	P59666	94 aa		11.14	□□□□□ -0.63
PPFIA4-208	ENST00000597023	CYCS	P99999	105 aa	Known RBP	11.14	□□□□□ -0.63
PPFIA4-208	ENST00000597023	AMTN	Q6UX39	209 aa		11.14	□□□□□ -0.63
PPFIA4-208	ENST00000597023	ZNF738	Q8NE65	137 aa		11.14	□□□□□ -0.63
PPFIA4-208	ENST00000597023	GOLT1B	Q9Y3E0	138 aa		11.14	□□□□□ -0.63
PPFIA4-208	ENST00000597023	RFNG	Q9Y644	331 aa		11.14	□□□□□ -0.63
PPFIA4-208	ENST00000597023	FAM24A	A6NFZ4	105 aa		11.13	□□□□□ -0.63
PPFIA4-208	ENST00000597023	AGPAT2	O15120	278 aa		11.13	□□□□□ -0.63
PPFIA4-208	ENST00000597023	UPK1B	O75841	260 aa		11.13	□□□□□ -0.63
PPFIA4-208	ENST00000597023	CST7	O76096	145 aa		11.13	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms