RNA–Protein interactions for RNA: ENST00000596549.5

LIG1-212, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-212ENST00000596549 APLNQ9ULZ1 77 aa9.38□□□□□ -0.91
LIG1-212ENST00000596549 C7orf66A4D0T2 115 aa9.37□□□□□ -0.91
LIG1-212ENST00000596549 C11orf94C9JXX5 98 aa9.37□□□□□ -0.91
LIG1-212ENST00000596549 FNDC10F2Z333 226 aa9.37□□□□□ -0.91
LIG1-212ENST00000596549 K7EPK0 472 aa9.37□□□□□ -0.91
LIG1-212ENST00000596549 IL5P05113 134 aa9.37□□□□□ -0.91
LIG1-212ENST00000596549 TAS2R30P59541 319 aa9.37□□□□□ -0.91
LIG1-212ENST00000596549 PRR20EP86478 221 aa9.37□□□□□ -0.91
LIG1-212ENST00000596549 PRR20CP86479 221 aa9.37□□□□□ -0.91
LIG1-212ENST00000596549 PRR20DP86480 221 aa9.37□□□□□ -0.91
LIG1-212ENST00000596549 PRR20BP86481 221 aa9.37□□□□□ -0.91
LIG1-212ENST00000596549 PRR20AP86496 221 aa9.37□□□□□ -0.91
LIG1-212ENST00000596549 C12orf74Q32Q52 190 aa9.37□□□□□ -0.91
LIG1-212ENST00000596549 FAM78BQ5VT40 261 aa9.37□□□□□ -0.91
LIG1-212ENST00000596549 AMTNQ6UX39 209 aa9.37□□□□□ -0.91
LIG1-212ENST00000596549 C16orf92Q96LL3 132 aa9.37□□□□□ -0.91
LIG1-212ENST00000596549 NEU1Q99519 415 aa9.37□□□□□ -0.91
LIG1-212ENST00000596549 RSG1Q9BU20 258 aa9.37□□□□□ -0.91
LIG1-212ENST00000596549 CCDC32Q9BV29 185 aa9.37□□□□□ -0.91
LIG1-212ENST00000596549 GSKIPQ9P0R6 139 aa9.37□□□□□ -0.91
LIG1-212ENST00000596549 FRAS1Q86XX4 4008 aa9.37□□□□□ -0.91
LIG1-212ENST00000596549 TRAV10A0A0B4J240 114 aa9.36□□□□□ -0.91
LIG1-212ENST00000596549 IGLL5B9A064 214 aa9.36□□□□□ -0.91
LIG1-212ENST00000596549 MRPS12O15235 138 aaKnown RBP9.36□□□□□ -0.91
LIG1-212ENST00000596549 SAMD13Q5VXD3 122 aa9.36□□□□□ -0.91
LIG1-212ENST00000596549 IGFL4Q6B9Z1 124 aa9.36□□□□□ -0.91
LIG1-212ENST00000596549 PATE2Q6UY27 113 aa9.36□□□□□ -0.91
LIG1-212ENST00000596549 C1orf158Q8N1D5 194 aa9.36□□□□□ -0.91
LIG1-212ENST00000596549 RNF182Q8N6D2 247 aa9.36□□□□□ -0.91
LIG1-212ENST00000596549 OR10P1Q8NGE3 313 aa9.36□□□□□ -0.91
LIG1-212ENST00000596549 ZNF431Q8TF32 576 aaPredicted RBP9.36□□□□□ -0.91
LIG1-212ENST00000596549 GPR82Q96P67 336 aa9.36□□□□□ -0.91
LIG1-212ENST00000596549 NPVFQ9HCQ7 196 aa9.36□□□□□ -0.91
LIG1-212ENST00000596549 RPRMQ9NS64 109 aa9.36□□□□□ -0.91
LIG1-212ENST00000596549 HIGD1AQ9Y241 93 aa9.36□□□□□ -0.91
LIG1-212ENST00000596549 VPS13DQ5THJ4 4388 aa9.35□□□□□ -0.91
LIG1-212ENST00000596549 IGHV3OR16-12A0A075B7B8 117 aa9.35□□□□□ -0.91
LIG1-212ENST00000596549 TCTAP57738 103 aa9.35□□□□□ -0.91
LIG1-212ENST00000596549 RAP2BP61225 183 aa9.35□□□□□ -0.91
LIG1-212ENST00000596549 SELENOTP62341 195 aa9.35□□□□□ -0.91
LIG1-212ENST00000596549 PSG9Q00887 426 aa9.35□□□□□ -0.91
LIG1-212ENST00000596549 SPATA31B1PQ5VZV4 182 aa9.35□□□□□ -0.91
LIG1-212ENST00000596549 EBLN2Q6P2I7 272 aa9.35□□□□□ -0.91
LIG1-212ENST00000596549 TEPPQ6URK8 271 aa9.35□□□□□ -0.91
LIG1-212ENST00000596549 MGST2Q99735 147 aa9.35□□□□□ -0.91
LIG1-212ENST00000596549 ARV1Q9H2C2 271 aa9.35□□□□□ -0.91
LIG1-212ENST00000596549 MGAT4CQ9UBM8 478 aa9.35□□□□□ -0.91
LIG1-212ENST00000596549 LSM5Q9Y4Y9 91 aaKnown RBP9.35□□□□□ -0.91
LIG1-212ENST00000596549 IGHV4-4A0A075B6R2 117 aa9.34□□□□□ -0.91
LIG1-212ENST00000596549 A0A087X0K7 114 aa9.34□□□□□ -0.91
LIG1-212ENST00000596549 HYPMO75409 117 aa9.34□□□□□ -0.91
LIG1-212ENST00000596549 AMBPP02760 352 aa9.34□□□□□ -0.91
LIG1-212ENST00000596549 OR5G3P0C626 314 aa9.34□□□□□ -0.91
LIG1-212ENST00000596549 ARL6Q9H0F7 186 aa9.34□□□□□ -0.91
LIG1-212ENST00000596549 FAM25EA8MYX2 175 aa9.33□□□□□ -0.92
LIG1-212ENST00000596549 AGPAT2O15120 278 aa9.33□□□□□ -0.92
LIG1-212ENST00000596549 CRXO43186 299 aaPredicted RBP9.33□□□□□ -0.92
LIG1-212ENST00000596549 H2AFB2P0C5Z0 115 aa9.33□□□□□ -0.92
LIG1-212ENST00000596549 PRB4P10163 310 aaPredicted RBP9.33□□□□□ -0.92
LIG1-212ENST00000596549 RPL7P18124 248 aaKnown RBP9.33□□□□□ -0.92
LIG1-212ENST00000596549 CNN1P51911 297 aaKnown RBP9.33□□□□□ -0.92
LIG1-212ENST00000596549 FGL1Q08830 312 aa9.33□□□□□ -0.92
LIG1-212ENST00000596549 MORN5Q5VZ52 161 aa9.33□□□□□ -0.92
LIG1-212ENST00000596549 LINC00299Q6ZSB3 139 aa9.33□□□□□ -0.92
LIG1-212ENST00000596549 ZNF546Q86UE3 836 aa9.33□□□□□ -0.92
LIG1-212ENST00000596549 C12orf45Q8N5I9 185 aaPredicted RBP9.33□□□□□ -0.92
LIG1-212ENST00000596549 DEFB131BA0A096LNP1 70 aa9.32□□□□□ -0.92
LIG1-212ENST00000596549 C5orf51A6NDU8 294 aa9.32□□□□□ -0.92
LIG1-212ENST00000596549 FAM24AA6NFZ4 105 aa9.32□□□□□ -0.92
LIG1-212ENST00000596549 SMIM9A6NGZ8 99 aa9.32□□□□□ -0.92
LIG1-212ENST00000596549 M0R2Z0 102 aa9.32□□□□□ -0.92
LIG1-212ENST00000596549 CXCL3P19876 107 aa9.32□□□□□ -0.92
LIG1-212ENST00000596549 S100A7P31151 101 aa9.32□□□□□ -0.92
LIG1-212ENST00000596549 IL15RAQ13261 267 aa9.32□□□□□ -0.92
LIG1-212ENST00000596549 ZNF846Q147U1 533 aa9.32□□□□□ -0.92
LIG1-212ENST00000596549 SPINK13Q1W4C9 94 aa9.32□□□□□ -0.92
LIG1-212ENST00000596549 OR11H7Q8NGC8 314 aa9.32□□□□□ -0.92
LIG1-212ENST00000596549 C2orf50Q96LR7 162 aa9.32□□□□□ -0.92
LIG1-212ENST00000596549 GGACTQ9BVM4 153 aa9.32□□□□□ -0.92
LIG1-212ENST00000596549 RFNGQ9Y644 331 aa9.32□□□□□ -0.92
LIG1-212ENST00000596549 IGSF23A1L1A6 192 aa9.31□□□□□ -0.92
LIG1-212ENST00000596549 L7N2F9 121 aa9.31□□□□□ -0.92
LIG1-212ENST00000596549 CST7O76096 145 aa9.31□□□□□ -0.92
LIG1-212ENST00000596549 CAV2P51636 162 aa9.31□□□□□ -0.92
LIG1-212ENST00000596549 EMP1P54849 157 aa9.31□□□□□ -0.92
LIG1-212ENST00000596549 VAMP2P63027 116 aa9.31□□□□□ -0.92
LIG1-212ENST00000596549 ASAH1Q13510 395 aa9.31□□□□□ -0.92
LIG1-212ENST00000596549 RAB32Q13637 225 aa9.31□□□□□ -0.92
LIG1-212ENST00000596549 BAP18Q8IXM2 172 aa9.31□□□□□ -0.92
LIG1-212ENST00000596549 ZNF738Q8NE65 137 aa9.31□□□□□ -0.92
LIG1-212ENST00000596549 TMEM37Q8WXS4 190 aa9.31□□□□□ -0.92
LIG1-212ENST00000596549 IGF2BP2-AS1Q96M15 143 aa9.31□□□□□ -0.92
LIG1-212ENST00000596549 RNF126Q9BV68 326 aa9.31□□□□□ -0.92
LIG1-212ENST00000596549 DKK2Q9UBU2 259 aa9.31□□□□□ -0.92
LIG1-212ENST00000596549 GOLT1BQ9Y3E0 138 aa9.31□□□□□ -0.92
LIG1-212ENST00000596549 LOC102723971A0A1B0GUV8 181 aa9.3□□□□□ -0.92
LIG1-212ENST00000596549 FAM240BA0A1B0GVZ2 78 aa9.3□□□□□ -0.92
LIG1-212ENST00000596549 TMEM189A5PLL7 270 aa9.3□□□□□ -0.92
LIG1-212ENST00000596549 SLC17A3O00476 420 aa9.3□□□□□ -0.92
LIG1-212ENST00000596549 GOSR2O14653 212 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms