RNA–Protein interactions for RNA: ENST00000596172.1

ZNF558-204, Transcript of zinc finger protein 558, humanhuman

TSL 4

Gene ZNF558, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-204ENST00000596172 SOCS3O14543 225 aa13.45□□□□□ -0.26
ZNF558-204ENST00000596172 ID1P41134 155 aa13.45□□□□□ -0.26
ZNF558-204ENST00000596172 Q6ZRG5 221 aa13.45□□□□□ -0.26
ZNF558-204ENST00000596172 SCRT1Q9BWW7 348 aa13.45□□□□□ -0.26
ZNF558-204ENST00000596172 CSTL1Q9H114 145 aa13.45□□□□□ -0.26
ZNF558-204ENST00000596172 TP53TG1Q9Y2A0 90 aa13.45□□□□□ -0.26
ZNF558-204ENST00000596172 ISLRO14498 428 aa13.44□□□□□ -0.26
ZNF558-204ENST00000596172 RPL35AP18077 110 aaKnown RBP13.44□□□□□ -0.26
ZNF558-204ENST00000596172 RPL7P18124 248 aaKnown RBP13.44□□□□□ -0.26
ZNF558-204ENST00000596172 PSMB3P49720 205 aa13.44□□□□□ -0.26
ZNF558-204ENST00000596172 OPCMLQ14982 345 aa13.44□□□□□ -0.26
ZNF558-204ENST00000596172 PSMG4Q5JS54 123 aa13.44□□□□□ -0.26
ZNF558-204ENST00000596172 C17orf77Q96MU5 243 aa13.44□□□□□ -0.26
ZNF558-204ENST00000596172 UHRF2Q96PU4 802 aa13.44□□□□□ -0.26
ZNF558-204ENST00000596172 RSG1Q9BU20 258 aa13.44□□□□□ -0.26
ZNF558-204ENST00000596172 DNAJC4Q9NNZ3 241 aa13.44□□□□□ -0.26
ZNF558-204ENST00000596172 MBD2Q9UBB5 411 aa13.44□□□□□ -0.26
ZNF558-204ENST00000596172 FGF7P21781 194 aa13.43□□□□□ -0.26
ZNF558-204ENST00000596172 RPL12P30050 165 aaKnown RBP13.43□□□□□ -0.26
ZNF558-204ENST00000596172 MIC13Q5XKP0 118 aa13.43□□□□□ -0.26
ZNF558-204ENST00000596172 STHQ8IWL8 128 aa13.43□□□□□ -0.26
ZNF558-204ENST00000596172 THAP6Q8TBB0 222 aa13.43□□□□□ -0.26
ZNF558-204ENST00000596172 TMEM37Q8WXS4 190 aa13.43□□□□□ -0.26
ZNF558-204ENST00000596172 OVOL2Q9BRP0 275 aa13.43□□□□□ -0.26
ZNF558-204ENST00000596172 HSPB11Q9Y547 144 aa13.43□□□□□ -0.26
ZNF558-204ENST00000596172 COX7A2P2O60397 106 aa13.42□□□□□ -0.26
ZNF558-204ENST00000596172 GIPP09681 153 aaPredicted RBP13.42□□□□□ -0.26
ZNF558-204ENST00000596172 B2MP61769 119 aa13.42□□□□□ -0.26
ZNF558-204ENST00000596172 FGL1Q08830 312 aa13.42□□□□□ -0.26
ZNF558-204ENST00000596172 C10orf113Q5VZT2 155 aa13.42□□□□□ -0.26
ZNF558-204ENST00000596172 LINC00305Q7Z4B0 112 aa13.42□□□□□ -0.26
ZNF558-204ENST00000596172 TRPT1Q86TN4 253 aaKnown RBP13.42□□□□□ -0.26
ZNF558-204ENST00000596172 OR1L4Q8NGR5 311 aa13.42□□□□□ -0.26
ZNF558-204ENST00000596172 NPCDR1Q9BY65 106 aa13.42□□□□□ -0.26
ZNF558-204ENST00000596172 RETNQ9HD89 108 aa13.42□□□□□ -0.26
ZNF558-204ENST00000596172 SLC39A9Q9NUM3 307 aa13.42□□□□□ -0.26
ZNF558-204ENST00000596172 CLINT1Q14677 625 aa13.41□□□□□ -0.26
ZNF558-204ENST00000596172 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.41□□□□□ -0.26
ZNF558-204ENST00000596172 RNF183Q96D59 192 aa13.41□□□□□ -0.26
ZNF558-204ENST00000596172 PFDN5Q99471 154 aa13.41□□□□□ -0.26
ZNF558-204ENST00000596172 ATP5SQ99766 215 aa13.41□□□□□ -0.26
ZNF558-204ENST00000596172 A0A087X0K7 114 aa13.4□□□□□ -0.26
ZNF558-204ENST00000596172 KNCNA6PVL3 124 aa13.4□□□□□ -0.26
ZNF558-204ENST00000596172 MRPS12O15235 138 aaKnown RBP13.4□□□□□ -0.26
ZNF558-204ENST00000596172 SPRY2O43597 315 aa13.4□□□□□ -0.26
ZNF558-204ENST00000596172 ACTL10Q5JWF8 245 aa13.4□□□□□ -0.26
ZNF558-204ENST00000596172 MORN3Q6PF18 240 aaPredicted RBP13.4□□□□□ -0.26
ZNF558-204ENST00000596172 GATAD1Q8WUU5 269 aa13.4□□□□□ -0.26
ZNF558-204ENST00000596172 WDR61Q9GZS3 305 aaKnown RBP13.4□□□□□ -0.26
ZNF558-204ENST00000596172 EDA2RQ9HAV5 297 aa13.4□□□□□ -0.26
ZNF558-204ENST00000596172 PXMP4Q9Y6I8 212 aa13.4□□□□□ -0.26
ZNF558-204ENST00000596172 SPP1P10451 314 aa13.39□□□□□ -0.27
ZNF558-204ENST00000596172 ATF4P18848 351 aaPredicted RBP13.39□□□□□ -0.27
ZNF558-204ENST00000596172 TMEM41BQ5BJD5 291 aa13.39□□□□□ -0.27
ZNF558-204ENST00000596172 SPATA31B1PQ5VZV4 182 aa13.39□□□□□ -0.27
ZNF558-204ENST00000596172 C16orf92Q96LL3 132 aa13.39□□□□□ -0.27
ZNF558-204ENST00000596172 LINC00052Q96N35 136 aa13.39□□□□□ -0.27
ZNF558-204ENST00000596172 KCNIP2Q9NS61 270 aa13.39□□□□□ -0.27
ZNF558-204ENST00000596172 H3BMM0 161 aa13.38□□□□□ -0.27
ZNF558-204ENST00000596172 HLA-DRB4P13762 266 aa13.38□□□□□ -0.27
ZNF558-204ENST00000596172 DEFB135Q30KP9 77 aa13.38□□□□□ -0.27
ZNF558-204ENST00000596172 FOXI2Q6ZQN5 318 aa13.38□□□□□ -0.27
ZNF558-204ENST00000596172 BPIFA4PQ86YQ2 179 aa13.38□□□□□ -0.27
ZNF558-204ENST00000596172 ZNF709Q8N972 641 aa13.38□□□□□ -0.27
ZNF558-204ENST00000596172 CLUHP3Q96NS8 147 aa13.38□□□□□ -0.27
ZNF558-204ENST00000596172 PARD6GQ9BYG4 376 aaPredicted RBP13.38□□□□□ -0.27
ZNF558-204ENST00000596172 HLA-DRB4X5D2U9 266 aa13.38□□□□□ -0.27
ZNF558-204ENST00000596172 DNAH7Q8WXX0 4024 aa13.37□□□□□ -0.27
ZNF558-204ENST00000596172 GIG44P09565 113 aaPredicted RBP13.37□□□□□ -0.27
ZNF558-204ENST00000596172 CXCL2P19875 107 aa13.37□□□□□ -0.27
ZNF558-204ENST00000596172 SAV1Q9H4B6 383 aaPredicted RBP13.37□□□□□ -0.27
ZNF558-204ENST00000596172 RPRMQ9NS64 109 aa13.37□□□□□ -0.27
ZNF558-204ENST00000596172 C17orf112F2Z3M2 114 aa13.36□□□□□ -0.27
ZNF558-204ENST00000596172 CA1P00915 261 aaPredicted RBP13.36□□□□□ -0.27
ZNF558-204ENST00000596172 IFNA5P01569 189 aa13.36□□□□□ -0.27
ZNF558-204ENST00000596172 Q5BKY6 102 aa13.36□□□□□ -0.27
ZNF558-204ENST00000596172 MORN5Q5VZ52 161 aa13.36□□□□□ -0.27
ZNF558-204ENST00000596172 AQP10Q96PS8 301 aa13.36□□□□□ -0.27
ZNF558-204ENST00000596172 TRAV8-2A0A0B4J237 113 aa13.35□□□□□ -0.27
ZNF558-204ENST00000596172 NUTF2P61970 127 aaKnown RBP13.35□□□□□ -0.27
ZNF558-204ENST00000596172 SCGB1C1Q8TD33 95 aa13.35□□□□□ -0.27
ZNF558-204ENST00000596172 C20orf173Q96LM9 149 aa13.35□□□□□ -0.27
ZNF558-204ENST00000596172 HRH4Q9H3N8 390 aa13.35□□□□□ -0.27
ZNF558-204ENST00000596172 WFDC1Q9HC57 220 aa13.35□□□□□ -0.27
ZNF558-204ENST00000596172 IGLC2P0DOY2 106 aa13.34□□□□□ -0.27
ZNF558-204ENST00000596172 EBLN2Q6P2I7 272 aa13.34□□□□□ -0.27
ZNF558-204ENST00000596172 LCN15Q6UWW0 184 aa13.34□□□□□ -0.27
ZNF558-204ENST00000596172 OR2T35Q8NGX2 323 aa13.34□□□□□ -0.27
ZNF558-204ENST00000596172 SMIM3Q9BZL3 60 aa13.34□□□□□ -0.27
ZNF558-204ENST00000596172 TMEM14CQ9P0S9 112 aa13.34□□□□□ -0.27
ZNF558-204ENST00000596172 TRAV5A0A0B4J249 113 aa13.33□□□□□ -0.28
ZNF558-204ENST00000596172 A0A0J9YX75 114 aa13.33□□□□□ -0.28
ZNF558-204ENST00000596172 C3orf84H3BNL1 204 aa13.33□□□□□ -0.28
ZNF558-204ENST00000596172 GUK1Q16774 197 aa13.33□□□□□ -0.28
ZNF558-204ENST00000596172 GDF5OSQ5U4N7 250 aa13.33□□□□□ -0.28
ZNF558-204ENST00000596172 MUC7Q8TAX7 377 aa13.33□□□□□ -0.28
ZNF558-204ENST00000596172 LRRC20Q8TCA0 184 aa13.33□□□□□ -0.28
ZNF558-204ENST00000596172 SLC50A1Q9BRV3 221 aa13.33□□□□□ -0.28
ZNF558-204ENST00000596172 A8MTW9 85 aa13.32□□□□□ -0.28
ZNF558-204ENST00000596172 C4BPBP20851 252 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms