RNA–Protein interactions for RNA: ENST00000596104.5

LIG1-209, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-209ENST00000596104 PRSS46E5RG02 174 aa6.93□□□□□ -1.3
LIG1-209ENST00000596104 BOLA2-SMG1P6H3BVE0 249 aa6.93□□□□□ -1.3
LIG1-209ENST00000596104 CTDSP2O14595 271 aa6.93□□□□□ -1.3
LIG1-209ENST00000596104 GGNBP1Q5YKI7 109 aa6.93□□□□□ -1.3
LIG1-209ENST00000596104 TMEM182Q6ZP80 229 aaPredicted RBP6.93□□□□□ -1.3
LIG1-209ENST00000596104 GPR141Q7Z602 305 aa6.93□□□□□ -1.3
LIG1-209ENST00000596104 CLVS1Q8IUQ0 354 aaPredicted RBP6.93□□□□□ -1.3
LIG1-209ENST00000596104 RNF182Q8N6D2 247 aa6.93□□□□□ -1.3
LIG1-209ENST00000596104 OR1B1Q8NGR6 318 aa6.93□□□□□ -1.3
LIG1-209ENST00000596104 OR1S1Q8NH92 325 aa6.93□□□□□ -1.3
LIG1-209ENST00000596104 SLC25A39Q9BZJ4 359 aaPredicted RBP6.93□□□□□ -1.3
LIG1-209ENST00000596104 Q9H8V8 135 aa6.93□□□□□ -1.3
LIG1-209ENST00000596104 ANKRD20A5PA0PJZ0 165 aa6.92□□□□□ -1.3
LIG1-209ENST00000596104 CTDSPLO15194 276 aa6.92□□□□□ -1.3
LIG1-209ENST00000596104 IAPPP10997 89 aa6.92□□□□□ -1.3
LIG1-209ENST00000596104 AKR1C4P17516 323 aa6.92□□□□□ -1.3
LIG1-209ENST00000596104 ORM2P19652 201 aa6.92□□□□□ -1.3
LIG1-209ENST00000596104 BTF3P20290 206 aaKnown RBP6.92□□□□□ -1.3
LIG1-209ENST00000596104 GATA2P23769 480 aaPredicted RBP6.92□□□□□ -1.3
LIG1-209ENST00000596104 TAS2R60P59551 318 aa6.92□□□□□ -1.3
LIG1-209ENST00000596104 RAB11AP62491 216 aa6.92□□□□□ -1.3
LIG1-209ENST00000596104 SRPXP78539 464 aa6.92□□□□□ -1.3
LIG1-209ENST00000596104 CLINT1Q14677 625 aa6.92□□□□□ -1.3
LIG1-209ENST00000596104 GPR82Q96P67 336 aa6.92□□□□□ -1.3
LIG1-209ENST00000596104 Q9H3A6 140 aa6.92□□□□□ -1.3
LIG1-209ENST00000596104 HERC1Q15751 4861 aa6.92□□□□□ -1.3
LIG1-209ENST00000596104 H3BRN7 92 aa6.91□□□□□ -1.3
LIG1-209ENST00000596104 TTC32Q5I0X7 151 aa6.91□□□□□ -1.3
LIG1-209ENST00000596104 TMEM256Q8N2U0 113 aa6.91□□□□□ -1.3
LIG1-209ENST00000596104 LINC00612Q8N6U2 182 aa6.91□□□□□ -1.3
LIG1-209ENST00000596104 ZNF738Q8NE65 137 aa6.91□□□□□ -1.3
LIG1-209ENST00000596104 BPIFCQ8NFQ6 507 aa6.91□□□□□ -1.3
LIG1-209ENST00000596104 OR8A1Q8NGG7 326 aa6.91□□□□□ -1.3
LIG1-209ENST00000596104 RNASE8Q8TDE3 154 aaKnown RBP6.91□□□□□ -1.3
LIG1-209ENST00000596104 C16orf74Q96GX8 76 aa6.91□□□□□ -1.3
LIG1-209ENST00000596104 SCGB3A2Q96PL1 93 aa6.91□□□□□ -1.3
LIG1-209ENST00000596104 LINC01587Q99440 93 aa6.91□□□□□ -1.3
LIG1-209ENST00000596104 UPK3BQ9BT76 320 aa6.91□□□□□ -1.3
LIG1-209ENST00000596104 TMEM147Q9BVK8 224 aa6.91□□□□□ -1.3
LIG1-209ENST00000596104 TIMM8BQ9Y5J9 83 aaPredicted RBP6.91□□□□□ -1.3
LIG1-209ENST00000596104 DUXBA0A1W2PPF3 345 aa6.9□□□□□ -1.3
LIG1-209ENST00000596104 RGS5O15539 181 aa6.9□□□□□ -1.3
LIG1-209ENST00000596104 ANXA3P12429 323 aa6.9□□□□□ -1.3
LIG1-209ENST00000596104 CXCL3P19876 107 aa6.9□□□□□ -1.3
LIG1-209ENST00000596104 HIST1H1AQ02539 215 aaPredicted RBP6.9□□□□□ -1.3
LIG1-209ENST00000596104 FGL1Q08830 312 aa6.9□□□□□ -1.3
LIG1-209ENST00000596104 ZNF493Q6ZR52 646 aa6.9□□□□□ -1.3
LIG1-209ENST00000596104 TMEM144Q7Z5S9 345 aa6.9□□□□□ -1.3
LIG1-209ENST00000596104 RXFP4Q8TDU9 374 aa6.9□□□□□ -1.3
LIG1-209ENST00000596104 ZNF503Q96F45 646 aa6.9□□□□□ -1.3
LIG1-209ENST00000596104 UHRF2Q96PU4 802 aa6.9□□□□□ -1.3
LIG1-209ENST00000596104 SHANK2-AS3Q9BTD1 123 aa6.9□□□□□ -1.3
LIG1-209ENST00000596104 NOP10Q9NPE3 64 aaKnown RBP6.9□□□□□ -1.3
LIG1-209ENST00000596104 SCP2D1Q9UJQ7 156 aa6.9□□□□□ -1.3
LIG1-209ENST00000596104 PAIP2BQ9ULR5 123 aaKnown RBP6.9□□□□□ -1.3
LIG1-209ENST00000596104 TRAV26-1A0A087WT03 109 aa6.89□□□□□ -1.31
LIG1-209ENST00000596104 A0A1W2PPQ1 181 aa6.89□□□□□ -1.31
LIG1-209ENST00000596104 SMIM18P0DKX4 95 aa6.89□□□□□ -1.31
LIG1-209ENST00000596104 SLC25A6P12236 298 aa6.89□□□□□ -1.31
LIG1-209ENST00000596104 RPL7P18124 248 aaKnown RBP6.89□□□□□ -1.31
LIG1-209ENST00000596104 M6PRP20645 277 aa6.89□□□□□ -1.31
LIG1-209ENST00000596104 RHOBP62745 196 aa6.89□□□□□ -1.31
LIG1-209ENST00000596104 IL18Q14116 193 aa6.89□□□□□ -1.31
LIG1-209ENST00000596104 ESRGQ1W209 222 aa6.89□□□□□ -1.31
LIG1-209ENST00000596104 ACOT7LQ6ZUV0 252 aa6.89□□□□□ -1.31
LIG1-209ENST00000596104 LRTM2Q8N967 370 aa6.89□□□□□ -1.31
LIG1-209ENST00000596104 OR10J6PQ8NGY7 276 aa6.89□□□□□ -1.31
LIG1-209ENST00000596104 TMEM263Q8WUH6 116 aaKnown RBP6.89□□□□□ -1.31
LIG1-209ENST00000596104 GNPNAT1Q96EK6 184 aaPredicted RBP6.89□□□□□ -1.31
LIG1-209ENST00000596104 A0A087X0K7 114 aa6.88□□□□□ -1.31
LIG1-209ENST00000596104 PIGBOS1A0A0B4J2F0 54 aa6.88□□□□□ -1.31
LIG1-209ENST00000596104 EPM2AB3EWF7 344 aa6.88□□□□□ -1.31
LIG1-209ENST00000596104 ZNF701M0R085 212 aaPredicted RBP6.88□□□□□ -1.31
LIG1-209ENST00000596104 WRBO00258 174 aa6.88□□□□□ -1.31
LIG1-209ENST00000596104 SYNGR2O43760 224 aa6.88□□□□□ -1.31
LIG1-209ENST00000596104 MED6O75586 246 aa6.88□□□□□ -1.31
LIG1-209ENST00000596104 PRB4P10163 310 aaPredicted RBP6.88□□□□□ -1.31
LIG1-209ENST00000596104 HTN1P15515 57 aa6.88□□□□□ -1.31
LIG1-209ENST00000596104 HOXA5P20719 270 aa6.88□□□□□ -1.31
LIG1-209ENST00000596104 S100A7P31151 101 aa6.88□□□□□ -1.31
LIG1-209ENST00000596104 CDKN1BP46527 198 aa6.88□□□□□ -1.31
LIG1-209ENST00000596104 PLP1P60201 277 aa6.88□□□□□ -1.31
LIG1-209ENST00000596104 AKR1C1Q04828 323 aa6.88□□□□□ -1.31
LIG1-209ENST00000596104 OR5I1Q13606 314 aa6.88□□□□□ -1.31
LIG1-209ENST00000596104 SPCS2Q15005 226 aa6.88□□□□□ -1.31
LIG1-209ENST00000596104 PSG3Q16557 428 aa6.88□□□□□ -1.31
LIG1-209ENST00000596104 Q6ZRN7 208 aaPredicted RBP6.88□□□□□ -1.31
LIG1-209ENST00000596104 CYP2G1PQ6ZSU1 146 aa6.88□□□□□ -1.31
LIG1-209ENST00000596104 DIRAS2Q96HU8 199 aa6.88□□□□□ -1.31
LIG1-209ENST00000596104 CIB3Q96Q77 187 aaPredicted RBP6.88□□□□□ -1.31
LIG1-209ENST00000596104 MCUBQ9NWR8 336 aa6.88□□□□□ -1.31
LIG1-209ENST00000596104 RABL2AQ9UBK7 228 aaPredicted RBP6.88□□□□□ -1.31
LIG1-209ENST00000596104 RABL2BQ9UNT1 228 aa6.88□□□□□ -1.31
LIG1-209ENST00000596104 MRPS16Q9Y3D3 137 aaKnown RBP6.88□□□□□ -1.31
LIG1-209ENST00000596104 DMBT1Q9UGM3 2413 aaPredicted RBP6.88□□□□□ -1.31
LIG1-209ENST00000596104 A0A0J9YY99 117 aa6.87□□□□□ -1.31
LIG1-209ENST00000596104 H3BNG1 76 aa6.87□□□□□ -1.31
LIG1-209ENST00000596104 H3BP45 60 aa6.87□□□□□ -1.31
LIG1-209ENST00000596104 H7BYZ3 331 aa6.87□□□□□ -1.31
LIG1-209ENST00000596104 MRPS12O15235 138 aaKnown RBP6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms