RNA–Protein interactions for RNA: ENST00000595945.5

SHKBP1-211, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-211ENST00000595945 ZNF207O43670 478 aaKnown RBP11.24□□□□□ -0.61
SHKBP1-211ENST00000595945 OR7C2O60412 319 aa11.24□□□□□ -0.61
SHKBP1-211ENST00000595945 APOHP02749 345 aaPredicted RBP11.24□□□□□ -0.61
SHKBP1-211ENST00000595945 CD5P06127 495 aa11.24□□□□□ -0.61
SHKBP1-211ENST00000595945 PYYP10082 97 aa11.24□□□□□ -0.61
SHKBP1-211ENST00000595945 BCL2P10415 239 aa11.24□□□□□ -0.61
SHKBP1-211ENST00000595945 NPPCP23582 126 aa11.24□□□□□ -0.61
SHKBP1-211ENST00000595945 GUK1Q16774 197 aa11.24□□□□□ -0.61
SHKBP1-211ENST00000595945 ZNF506Q5JVG8 444 aa11.24□□□□□ -0.61
SHKBP1-211ENST00000595945 C1orf194Q5T5A4 169 aa11.24□□□□□ -0.61
SHKBP1-211ENST00000595945 C1QL4Q86Z23 238 aa11.24□□□□□ -0.61
SHKBP1-211ENST00000595945 TMEM167BQ9NRX6 74 aa11.24□□□□□ -0.61
SHKBP1-211ENST00000595945 UFC1Q9Y3C8 167 aa11.24□□□□□ -0.61
SHKBP1-211ENST00000595945 COL6A5A8TX70 2615 aa11.24□□□□□ -0.61
SHKBP1-211ENST00000595945 IGHV7-4-1A0A0J9YVY3 117 aa11.23□□□□□ -0.61
SHKBP1-211ENST00000595945 SLURP1P55000 103 aa11.23□□□□□ -0.61
SHKBP1-211ENST00000595945 UBE2L3P68036 154 aaKnown RBP11.23□□□□□ -0.61
SHKBP1-211ENST00000595945 SRSF3P84103 164 aaKnown RBP11.23□□□□□ -0.61
SHKBP1-211ENST00000595945 TM4SF20Q53R12 229 aa11.23□□□□□ -0.61
SHKBP1-211ENST00000595945 AWAT1Q58HT5 328 aa11.23□□□□□ -0.61
SHKBP1-211ENST00000595945 TOR2AQ5JU69 321 aa11.23□□□□□ -0.61
SHKBP1-211ENST00000595945 NDUFA11Q86Y39 141 aa11.23□□□□□ -0.61
SHKBP1-211ENST00000595945 BPIFA4PQ86YQ2 179 aa11.23□□□□□ -0.61
SHKBP1-211ENST00000595945 DPF1Q92782 380 aa11.23□□□□□ -0.61
SHKBP1-211ENST00000595945 MANBALQ9NQG1 85 aa11.23□□□□□ -0.61
SHKBP1-211ENST00000595945 DAZ1Q9NQZ3 744 aaKnown RBP11.23□□□□□ -0.61
SHKBP1-211ENST00000595945 GNG13Q9P2W3 67 aa11.23□□□□□ -0.61
SHKBP1-211ENST00000595945 ARL2-SNX15V9GYD0 113 aa11.23□□□□□ -0.61
SHKBP1-211ENST00000595945 A0A1W2PRX2 142 aa11.22□□□□□ -0.61
SHKBP1-211ENST00000595945 ZNF320A2RRD8 509 aa11.22□□□□□ -0.61
SHKBP1-211ENST00000595945 TMEM213A2RRL7 107 aa11.22□□□□□ -0.61
SHKBP1-211ENST00000595945 IFNA1P01562 189 aa11.22□□□□□ -0.61
SHKBP1-211ENST00000595945 OR10J4P0C629 311 aa11.22□□□□□ -0.61
SHKBP1-211ENST00000595945 IGLC2P0DOY2 106 aa11.22□□□□□ -0.61
SHKBP1-211ENST00000595945 HIST1H1EP10412 219 aaKnown RBP11.22□□□□□ -0.61
SHKBP1-211ENST00000595945 TAGLN2P37802 199 aaKnown RBP11.22□□□□□ -0.61
SHKBP1-211ENST00000595945 SYNJ2BPP57105 145 aa11.22□□□□□ -0.61
SHKBP1-211ENST00000595945 ICAM4Q14773 271 aa11.22□□□□□ -0.61
SHKBP1-211ENST00000595945 HAGHQ16775 308 aa11.22□□□□□ -0.61
SHKBP1-211ENST00000595945 UQCC3Q6UW78 93 aa11.22□□□□□ -0.61
SHKBP1-211ENST00000595945 C16orf54Q6UWD8 224 aa11.22□□□□□ -0.61
SHKBP1-211ENST00000595945 IQCF2Q8IXL9 164 aa11.22□□□□□ -0.61
SHKBP1-211ENST00000595945 GLMPQ8WWB7 406 aa11.22□□□□□ -0.61
SHKBP1-211ENST00000595945 C17orf77Q96MU5 243 aa11.22□□□□□ -0.61
SHKBP1-211ENST00000595945 GPR82Q96P67 336 aa11.22□□□□□ -0.61
SHKBP1-211ENST00000595945 DUX3Q96PT4 197 aa11.22□□□□□ -0.61
SHKBP1-211ENST00000595945 RARRES2Q99969 163 aa11.22□□□□□ -0.61
SHKBP1-211ENST00000595945 SMPXQ9UHP9 88 aa11.22□□□□□ -0.61
SHKBP1-211ENST00000595945 A0A1W2PS18 150 aa11.21□□□□□ -0.61
SHKBP1-211ENST00000595945 H3BQ15 152 aa11.21□□□□□ -0.61
SHKBP1-211ENST00000595945 CCL24O00175 119 aa11.21□□□□□ -0.61
SHKBP1-211ENST00000595945 PAGE4O60829 102 aa11.21□□□□□ -0.61
SHKBP1-211ENST00000595945 NDUFS6O75380 124 aaKnown RBP11.21□□□□□ -0.61
SHKBP1-211ENST00000595945 RPL7P18124 248 aaKnown RBP11.21□□□□□ -0.61
SHKBP1-211ENST00000595945 CITED1Q99966 193 aa11.21□□□□□ -0.61
SHKBP1-211ENST00000595945 YTHDF2Q9Y5A9 579 aaKnown RBP11.21□□□□□ -0.61
SHKBP1-211ENST00000595945 SMAD5-AS1Q9Y6J3 95 aa11.21□□□□□ -0.61
SHKBP1-211ENST00000595945 IGHV3OR16-13A0A075B7E8 117 aa11.2□□□□□ -0.62
SHKBP1-211ENST00000595945 A0A087X0K7 114 aa11.2□□□□□ -0.62
SHKBP1-211ENST00000595945 IGHV3-49A0A0A0MS15 119 aa11.2□□□□□ -0.62
SHKBP1-211ENST00000595945 IGHV3-74A0A0B4J1X5 117 aa11.2□□□□□ -0.62
SHKBP1-211ENST00000595945 FAM74A7A6NL05 159 aa11.2□□□□□ -0.62
SHKBP1-211ENST00000595945 C9JQL5 133 aa11.2□□□□□ -0.62
SHKBP1-211ENST00000595945 CHEK1O14757 476 aa11.2□□□□□ -0.62
SHKBP1-211ENST00000595945 NBEAP1P0C6P0 100 aa11.2□□□□□ -0.62
SHKBP1-211ENST00000595945 EDN2P20800 178 aa11.2□□□□□ -0.62
SHKBP1-211ENST00000595945 OR8I2Q8N0Y5 310 aa11.2□□□□□ -0.62
SHKBP1-211ENST00000595945 OR4F17Q8NGA8 305 aa11.2□□□□□ -0.62
SHKBP1-211ENST00000595945 DLX4Q92988 240 aaPredicted RBP11.2□□□□□ -0.62
SHKBP1-211ENST00000595945 NARS2Q96I59 477 aaKnown RBP11.2□□□□□ -0.62
SHKBP1-211ENST00000595945 OR4F4Q96R69 305 aa11.2□□□□□ -0.62
SHKBP1-211ENST00000595945 SMDT1Q9H4I9 107 aa11.2□□□□□ -0.62
SHKBP1-211ENST00000595945 ZNF586Q9NXT0 402 aa11.2□□□□□ -0.62
SHKBP1-211ENST00000595945 VAX2Q9UIW0 290 aa11.2□□□□□ -0.62
SHKBP1-211ENST00000595945 SORL1Q92673 2214 aa11.19□□□□□ -0.62
SHKBP1-211ENST00000595945 TRBV19A0A075B6N1 114 aa11.19□□□□□ -0.62
SHKBP1-211ENST00000595945 IGHV3-66A0A0C4DH42 116 aa11.19□□□□□ -0.62
SHKBP1-211ENST00000595945 A0A1W2PRE2 83 aa11.19□□□□□ -0.62
SHKBP1-211ENST00000595945 C2orf70A6NJV1 201 aa11.19□□□□□ -0.62
SHKBP1-211ENST00000595945 NDUFB4O95168 129 aa11.19□□□□□ -0.62
SHKBP1-211ENST00000595945 MYCNOSP40205 109 aa11.19□□□□□ -0.62
SHKBP1-211ENST00000595945 UBE2G2P60604 165 aa11.19□□□□□ -0.62
SHKBP1-211ENST00000595945 PEA15Q15121 130 aa11.19□□□□□ -0.62
SHKBP1-211ENST00000595945 NSUN5P1Q3KNT7 163 aa11.19□□□□□ -0.62
SHKBP1-211ENST00000595945 ADAMTSL5Q6ZMM2 481 aa11.19□□□□□ -0.62
SHKBP1-211ENST00000595945 RXFP4Q8TDU9 374 aa11.19□□□□□ -0.62
SHKBP1-211ENST00000595945 TXNDC17Q9BRA2 123 aa11.19□□□□□ -0.62
SHKBP1-211ENST00000595945 RHPN1-AS1Q9BWJ2 59 aa11.19□□□□□ -0.62
SHKBP1-211ENST00000595945 EIF5A2Q9GZV4 153 aaKnown RBP11.19□□□□□ -0.62
SHKBP1-211ENST00000595945 TMEM231Q9H6L2 316 aa11.19□□□□□ -0.62
SHKBP1-211ENST00000595945 FBN1P35555 2871 aaKnown RBP11.18□□□□□ -0.62
SHKBP1-211ENST00000595945 SRP19P09132 144 aaKnown RBP11.18□□□□□ -0.62
SHKBP1-211ENST00000595945 CD81P60033 236 aa11.18□□□□□ -0.62
SHKBP1-211ENST00000595945 MEF2BQ02080 365 aaPredicted RBP11.18□□□□□ -0.62
SHKBP1-211ENST00000595945 CCDC28AQ8IWP9 274 aa11.18□□□□□ -0.62
SHKBP1-211ENST00000595945 OR9G4Q8NGQ1 327 aa11.18□□□□□ -0.62
SHKBP1-211ENST00000595945 GRAMD2BQ96HH9 432 aa11.18□□□□□ -0.62
SHKBP1-211ENST00000595945 VWFP04275 2813 aa11.18□□□□□ -0.62
SHKBP1-211ENST00000595945 C11orf94C9JXX5 98 aa11.17□□□□□ -0.62
SHKBP1-211ENST00000595945 H3BTX0 84 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms