RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-208ENST00000595726 FABP1P07148 127 aa9.73□□□□□ -0.85
SHKBP1-208ENST00000595726 SPART-AS1P0CW21 52 aa9.73□□□□□ -0.85
SHKBP1-208ENST00000595726 PAX9P55771 341 aa9.73□□□□□ -0.85
SHKBP1-208ENST00000595726 LYZP61626 148 aa9.73□□□□□ -0.85
SHKBP1-208ENST00000595726 ASAH1Q13510 395 aa9.73□□□□□ -0.85
SHKBP1-208ENST00000595726 SIGLEC15Q6ZMC9 328 aa9.73□□□□□ -0.85
SHKBP1-208ENST00000595726 ZNF431Q8TF32 576 aaPredicted RBP9.73□□□□□ -0.85
SHKBP1-208ENST00000595726 SMIM8Q96KF7 97 aa9.73□□□□□ -0.85
SHKBP1-208ENST00000595726 WDR12Q9GZL7 423 aaKnown RBP9.73□□□□□ -0.85
SHKBP1-208ENST00000595726 XCL2Q9UBD3 114 aa9.73□□□□□ -0.85
SHKBP1-208ENST00000595726 RCL1Q9Y2P8 373 aaKnown RBP9.73□□□□□ -0.85
SHKBP1-208ENST00000595726 NBDYA0A0U1RRE5 68 aa9.72□□□□□ -0.85
SHKBP1-208ENST00000595726 FAM240BA0A1B0GVZ2 78 aa9.72□□□□□ -0.85
SHKBP1-208ENST00000595726 H2AFB2P0C5Z0 115 aa9.72□□□□□ -0.85
SHKBP1-208ENST00000595726 NUP62P37198 522 aaPredicted RBP9.72□□□□□ -0.85
SHKBP1-208ENST00000595726 AP2S1P53680 142 aaPredicted RBP9.72□□□□□ -0.85
SHKBP1-208ENST00000595726 AKR1C1Q04828 323 aa9.72□□□□□ -0.85
SHKBP1-208ENST00000595726 OR2F1Q13607 317 aa9.72□□□□□ -0.85
SHKBP1-208ENST00000595726 TMEM14EPQ6UXP3 125 aa9.72□□□□□ -0.85
SHKBP1-208ENST00000595726 FAM210BQ96KR6 192 aa9.72□□□□□ -0.85
SHKBP1-208ENST00000595726 GSKIPQ9P0R6 139 aa9.72□□□□□ -0.85
SHKBP1-208ENST00000595726 SNRPGP15A8MWD9 76 aa9.71□□□□□ -0.86
SHKBP1-208ENST00000595726 UPK1BO75841 260 aa9.71□□□□□ -0.86
SHKBP1-208ENST00000595726 CCNKO75909 580 aa9.71□□□□□ -0.86
SHKBP1-208ENST00000595726 MBPP02686 304 aaPredicted RBP9.71□□□□□ -0.86
SHKBP1-208ENST00000595726 ZNF846Q147U1 533 aa9.71□□□□□ -0.86
SHKBP1-208ENST00000595726 MZT2BQ6NZ67 158 aa9.71□□□□□ -0.86
SHKBP1-208ENST00000595726 TMEM88Q6PEY1 159 aa9.71□□□□□ -0.86
SHKBP1-208ENST00000595726 RAB40CQ96S21 281 aa9.71□□□□□ -0.86
SHKBP1-208ENST00000595726 NRN1Q9NPD7 142 aa9.71□□□□□ -0.86
SHKBP1-208ENST00000595726 HMCN2Q8NDA2 5059 aa9.7□□□□□ -0.86
SHKBP1-208ENST00000595726 TSC22D2O75157 780 aa9.7□□□□□ -0.86
SHKBP1-208ENST00000595726 METTL15P1P0C7V9 234 aa9.7□□□□□ -0.86
SHKBP1-208ENST00000595726 TAS2R30P59541 319 aa9.7□□□□□ -0.86
SHKBP1-208ENST00000595726 IFITM3Q01628 133 aa9.7□□□□□ -0.86
SHKBP1-208ENST00000595726 TMEM182Q6ZP80 229 aaPredicted RBP9.7□□□□□ -0.86
SHKBP1-208ENST00000595726 TMEM144Q7Z5S9 345 aa9.7□□□□□ -0.86
SHKBP1-208ENST00000595726 C12orf45Q8N5I9 185 aaPredicted RBP9.7□□□□□ -0.86
SHKBP1-208ENST00000595726 PFDN2Q9UHV9 154 aa9.7□□□□□ -0.86
SHKBP1-208ENST00000595726 SMCO3A2RU48 225 aa9.69□□□□□ -0.86
SHKBP1-208ENST00000595726 C7orf66A4D0T2 115 aa9.69□□□□□ -0.86
SHKBP1-208ENST00000595726 FAM25EA8MYX2 175 aa9.69□□□□□ -0.86
SHKBP1-208ENST00000595726 CFDP00746 253 aaPredicted RBP9.69□□□□□ -0.86
SHKBP1-208ENST00000595726 GATA2P23769 480 aaPredicted RBP9.69□□□□□ -0.86
SHKBP1-208ENST00000595726 DLK1P80370 383 aa9.69□□□□□ -0.86
SHKBP1-208ENST00000595726 PSMG4Q5JS54 123 aa9.69□□□□□ -0.86
SHKBP1-208ENST00000595726 C1orf194Q5T5A4 169 aa9.69□□□□□ -0.86
SHKBP1-208ENST00000595726 BPIFCQ8NFQ6 507 aa9.69□□□□□ -0.86
SHKBP1-208ENST00000595726 ZNRF2Q8NHG8 242 aa9.69□□□□□ -0.86
SHKBP1-208ENST00000595726 SEPSECSQ9HD40 501 aaKnown RBP9.69□□□□□ -0.86
SHKBP1-208ENST00000595726 FNDC10F2Z333 226 aa9.68□□□□□ -0.86
SHKBP1-208ENST00000595726 RRAS2P62070 204 aaPredicted RBP9.68□□□□□ -0.86
SHKBP1-208ENST00000595726 SNRPD3P62318 126 aaKnown RBP9.68□□□□□ -0.86
SHKBP1-208ENST00000595726 FAM222AQ5U5X8 452 aa9.68□□□□□ -0.86
SHKBP1-208ENST00000595726 OR10P1Q8NGE3 313 aa9.68□□□□□ -0.86
SHKBP1-208ENST00000595726 ENKURQ8TC29 256 aa9.68□□□□□ -0.86
SHKBP1-208ENST00000595726 PPP1R14BQ96C90 147 aa9.68□□□□□ -0.86
SHKBP1-208ENST00000595726 NIPSNAP3BQ9BS92 247 aa9.68□□□□□ -0.86
SHKBP1-208ENST00000595726 ATG101Q9BSB4 218 aa9.68□□□□□ -0.86
SHKBP1-208ENST00000595726 DKK2Q9UBU2 259 aa9.68□□□□□ -0.86
SHKBP1-208ENST00000595726 SLC45A2Q9UMX9 530 aa9.68□□□□□ -0.86
SHKBP1-208ENST00000595726 IGHV3OR16-12A0A075B7B8 117 aa9.67□□□□□ -0.86
SHKBP1-208ENST00000595726 C5orf51A6NDU8 294 aa9.67□□□□□ -0.86
SHKBP1-208ENST00000595726 K7EPK0 472 aa9.67□□□□□ -0.86
SHKBP1-208ENST00000595726 SOCS3O14543 225 aa9.67□□□□□ -0.86
SHKBP1-208ENST00000595726 IL5P05113 134 aa9.67□□□□□ -0.86
SHKBP1-208ENST00000595726 ORM2P19652 201 aa9.67□□□□□ -0.86
SHKBP1-208ENST00000595726 ARL16Q0P5N6 197 aa9.67□□□□□ -0.86
SHKBP1-208ENST00000595726 Q5VSD8 79 aa9.67□□□□□ -0.86
SHKBP1-208ENST00000595726 CYP2G1PQ6ZSU1 146 aa9.67□□□□□ -0.86
SHKBP1-208ENST00000595726 C2orf50Q96LR7 162 aa9.67□□□□□ -0.86
SHKBP1-208ENST00000595726 C18orf15Q96N68 181 aa9.67□□□□□ -0.86
SHKBP1-208ENST00000595726 C11orf1Q9H5F2 150 aa9.67□□□□□ -0.86
SHKBP1-208ENST00000595726 LSM5Q9Y4Y9 91 aaKnown RBP9.67□□□□□ -0.86
SHKBP1-208ENST00000595726 FUSP35637 526 aaKnown RBP eCLIP9.66□□□□□ -0.86
SHKBP1-208ENST00000595726 FAM3BP58499 235 aaPredicted RBP9.66□□□□□ -0.86
SHKBP1-208ENST00000595726 ZNF705AQ6ZN79 300 aaPredicted RBP9.66□□□□□ -0.86
SHKBP1-208ENST00000595726 NRARPQ7Z6K4 114 aa9.66□□□□□ -0.86
SHKBP1-208ENST00000595726 OR8I2Q8N0Y5 310 aa9.66□□□□□ -0.86
SHKBP1-208ENST00000595726 LYPD1Q8N2G4 141 aa9.66□□□□□ -0.86
SHKBP1-208ENST00000595726 OR1B1Q8NGR6 318 aa9.66□□□□□ -0.86
SHKBP1-208ENST00000595726 SLC25A32Q9H2D1 315 aa9.66□□□□□ -0.86
SHKBP1-208ENST00000595726 SLC25A22Q9H936 323 aa9.66□□□□□ -0.86
SHKBP1-208ENST00000595726 NPVFQ9HCQ7 196 aa9.66□□□□□ -0.86
SHKBP1-208ENST00000595726 MGAT4CQ9UBM8 478 aa9.66□□□□□ -0.86
SHKBP1-208ENST00000595726 ZNF98A6NK75 572 aa9.65□□□□□ -0.86
SHKBP1-208ENST00000595726 ZNF705FA8MVS1 300 aaPredicted RBP9.65□□□□□ -0.86
SHKBP1-208ENST00000595726 H3BRN7 92 aa9.65□□□□□ -0.86
SHKBP1-208ENST00000595726 L7N2F9 121 aa9.65□□□□□ -0.86
SHKBP1-208ENST00000595726 LINC00869P0C866 280 aa9.65□□□□□ -0.86
SHKBP1-208ENST00000595726 ZNF705DP0CH99 300 aaPredicted RBP9.65□□□□□ -0.86
SHKBP1-208ENST00000595726 ZNF705BP0CI00 300 aaPredicted RBP9.65□□□□□ -0.86
SHKBP1-208ENST00000595726 PSMB3P49720 205 aa9.65□□□□□ -0.86
SHKBP1-208ENST00000595726 XGP55808 180 aa9.65□□□□□ -0.86
SHKBP1-208ENST00000595726 FXYD7P58549 80 aa9.65□□□□□ -0.86
SHKBP1-208ENST00000595726 SELENOTP62341 195 aa9.65□□□□□ -0.86
SHKBP1-208ENST00000595726 VAMP2P63027 116 aa9.65□□□□□ -0.86
SHKBP1-208ENST00000595726 IL15RAQ13261 267 aa9.65□□□□□ -0.86
SHKBP1-208ENST00000595726 TEPPQ6URK8 271 aa9.65□□□□□ -0.86
SHKBP1-208ENST00000595726 GSG1LQ6UXU4 331 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms