RNA–Protein interactions for RNA: ENST00000595659.5

CCDC9-202, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-202ENST00000595659 ANXA7P20073 488 aaKnown RBP12.14□□□□□ -0.47
CCDC9-202ENST00000595659 UBE2MP61081 183 aaKnown RBP12.14□□□□□ -0.47
CCDC9-202ENST00000595659 TRIQKQ629K1 86 aa12.14□□□□□ -0.47
CCDC9-202ENST00000595659 TMEM144Q7Z5S9 345 aa12.14□□□□□ -0.47
CCDC9-202ENST00000595659 RNF182Q8N6D2 247 aa12.14□□□□□ -0.47
CCDC9-202ENST00000595659 POM121L12Q8N7R1 296 aa12.14□□□□□ -0.47
CCDC9-202ENST00000595659 NIPSNAP3BQ9BS92 247 aa12.14□□□□□ -0.47
CCDC9-202ENST00000595659 SLC45A2Q9UMX9 530 aa12.14□□□□□ -0.47
CCDC9-202ENST00000595659 YTHDF2Q9Y5A9 579 aaKnown RBP12.14□□□□□ -0.47
CCDC9-202ENST00000595659 DNAH2Q9P225 4427 aa12.14□□□□□ -0.47
CCDC9-202ENST00000595659 TRAV8-2A0A0B4J237 113 aa12.13□□□□□ -0.47
CCDC9-202ENST00000595659 PMS2P5A8MQ11 134 aa12.13□□□□□ -0.47
CCDC9-202ENST00000595659 SCGB1D2O95969 90 aa12.13□□□□□ -0.47
CCDC9-202ENST00000595659 IFNA21P01568 189 aa12.13□□□□□ -0.47
CCDC9-202ENST00000595659 P0DMU3 169 aa12.13□□□□□ -0.47
CCDC9-202ENST00000595659 FAM231AP0DMU4 169 aa12.13□□□□□ -0.47
CCDC9-202ENST00000595659 FAM231CP0DMU5 169 aa12.13□□□□□ -0.47
CCDC9-202ENST00000595659 SPINK13Q1W4C9 94 aa12.13□□□□□ -0.47
CCDC9-202ENST00000595659 SAMD13Q5VXD3 122 aa12.13□□□□□ -0.47
CCDC9-202ENST00000595659 AMTNQ6UX39 209 aa12.13□□□□□ -0.47
CCDC9-202ENST00000595659 OR4D5Q8NGN0 318 aa12.13□□□□□ -0.47
CCDC9-202ENST00000595659 TMEM208Q9BTX3 173 aa12.13□□□□□ -0.47
CCDC9-202ENST00000595659 KRTAP17-1Q9BYP8 105 aa12.13□□□□□ -0.47
CCDC9-202ENST00000595659 SLC25A39Q9BZJ4 359 aaPredicted RBP12.13□□□□□ -0.47
CCDC9-202ENST00000595659 HECTD4Q9Y4D8 3996 aa12.12□□□□□ -0.47
CCDC9-202ENST00000595659 H3BRN7 92 aa12.12□□□□□ -0.47
CCDC9-202ENST00000595659 M0R2Z0 102 aa12.12□□□□□ -0.47
CCDC9-202ENST00000595659 OR5G3P0C626 314 aa12.12□□□□□ -0.47
CCDC9-202ENST00000595659 OR4E1P0C645 316 aa12.12□□□□□ -0.47
CCDC9-202ENST00000595659 METTL15P1P0C7V9 234 aa12.12□□□□□ -0.47
CCDC9-202ENST00000595659 CNN1P51911 297 aaKnown RBP12.12□□□□□ -0.47
CCDC9-202ENST00000595659 RRN3P1Q2M238 152 aa12.12□□□□□ -0.47
CCDC9-202ENST00000595659 C4orf46Q504U0 113 aa12.12□□□□□ -0.47
CCDC9-202ENST00000595659 UHRF2Q96PU4 802 aa12.12□□□□□ -0.47
CCDC9-202ENST00000595659 HIGD1AQ9Y241 93 aa12.12□□□□□ -0.47
CCDC9-202ENST00000595659 NAP1L6A6NFF2 107 aa12.11□□□□□ -0.47
CCDC9-202ENST00000595659 ZNF705GA8MUZ8 300 aaPredicted RBP12.11□□□□□ -0.47
CCDC9-202ENST00000595659 HYPMO75409 117 aa12.11□□□□□ -0.47
CCDC9-202ENST00000595659 LINC00869P0C866 280 aa12.11□□□□□ -0.47
CCDC9-202ENST00000595659 RAP2BP61225 183 aa12.11□□□□□ -0.47
CCDC9-202ENST00000595659 ZNF738Q8NE65 137 aa12.11□□□□□ -0.47
CCDC9-202ENST00000595659 SMIM8Q96KF7 97 aa12.11□□□□□ -0.47
CCDC9-202ENST00000595659 IGF2BP2-AS1Q96M15 143 aa12.11□□□□□ -0.47
CCDC9-202ENST00000595659 GPR82Q96P67 336 aa12.11□□□□□ -0.47
CCDC9-202ENST00000595659 SDHCQ99643 169 aaPredicted RBP12.11□□□□□ -0.47
CCDC9-202ENST00000595659 SHANK2-AS3Q9BTD1 123 aa12.11□□□□□ -0.47
CCDC9-202ENST00000595659 GSKIPQ9P0R6 139 aa12.11□□□□□ -0.47
CCDC9-202ENST00000595659 IGLV2-18A0A075B6J9 118 aa12.1□□□□□ -0.47
CCDC9-202ENST00000595659 BTCP35070 178 aa12.1□□□□□ -0.47
CCDC9-202ENST00000595659 IAH1Q2TAA2 248 aaPredicted RBP12.1□□□□□ -0.47
CCDC9-202ENST00000595659 UBE2DNLQ8IWF7 75 aa12.1□□□□□ -0.47
CCDC9-202ENST00000595659 OR11H7Q8NGC8 314 aa12.1□□□□□ -0.47
CCDC9-202ENST00000595659 FAT2Q9NYQ8 4349 aa12.1□□□□□ -0.47
CCDC9-202ENST00000595659 TRAV12-2A0A075B6T6 113 aa12.09□□□□□ -0.47
CCDC9-202ENST00000595659 A8MTW9 85 aa12.09□□□□□ -0.47
CCDC9-202ENST00000595659 CRXO43186 299 aaPredicted RBP12.09□□□□□ -0.47
CCDC9-202ENST00000595659 DUSP14O95147 198 aaKnown RBP12.09□□□□□ -0.47
CCDC9-202ENST00000595659 SNRPCP09234 159 aaKnown RBP12.09□□□□□ -0.47
CCDC9-202ENST00000595659 S100A7P31151 101 aa12.09□□□□□ -0.47
CCDC9-202ENST00000595659 DAD1P61803 113 aa12.09□□□□□ -0.47
CCDC9-202ENST00000595659 SLC38A11Q08AI6 406 aa12.09□□□□□ -0.47
CCDC9-202ENST00000595659 BAP18Q8IXM2 172 aa12.09□□□□□ -0.47
CCDC9-202ENST00000595659 ARL6Q9H0F7 186 aa12.09□□□□□ -0.47
CCDC9-202ENST00000595659 DNAH17Q9UFH2 4485 aa12.08□□□□□ -0.48
CCDC9-202ENST00000595659 RPL7P18124 248 aaKnown RBP12.08□□□□□ -0.48
CCDC9-202ENST00000595659 DLK1P80370 383 aa12.08□□□□□ -0.48
CCDC9-202ENST00000595659 ARL16Q0P5N6 197 aa12.08□□□□□ -0.48
CCDC9-202ENST00000595659 TMEM88Q6PEY1 159 aa12.08□□□□□ -0.48
CCDC9-202ENST00000595659 TMEM14EPQ6UXP3 125 aa12.08□□□□□ -0.48
CCDC9-202ENST00000595659 PATE2Q6UY27 113 aa12.08□□□□□ -0.48
CCDC9-202ENST00000595659 OR10P1Q8NGE3 313 aa12.08□□□□□ -0.48
CCDC9-202ENST00000595659 KIAA1109Q2LD37 5005 aa12.08□□□□□ -0.48
CCDC9-202ENST00000595659 TEX48A0A1B0GUV7 120 aa12.07□□□□□ -0.48
CCDC9-202ENST00000595659 CENPXA8MT69 81 aa12.07□□□□□ -0.48
CCDC9-202ENST00000595659 ZNF701M0R085 212 aaPredicted RBP12.07□□□□□ -0.48
CCDC9-202ENST00000595659 CCSO14618 274 aa12.07□□□□□ -0.48
CCDC9-202ENST00000595659 INSP01308 110 aa12.07□□□□□ -0.48
CCDC9-202ENST00000595659 PLP1P60201 277 aa12.07□□□□□ -0.48
CCDC9-202ENST00000595659 RHOBP62745 196 aa12.07□□□□□ -0.48
CCDC9-202ENST00000595659 HIST1H1AQ02539 215 aaPredicted RBP12.07□□□□□ -0.48
CCDC9-202ENST00000595659 LINC00336Q6ZUF6 198 aa12.07□□□□□ -0.48
CCDC9-202ENST00000595659 ZBTB8BQ8NAP8 495 aaPredicted RBP12.07□□□□□ -0.48
CCDC9-202ENST00000595659 LRRC20Q8TCA0 184 aa12.07□□□□□ -0.48
CCDC9-202ENST00000595659 NPVFQ9HCQ7 196 aa12.07□□□□□ -0.48
CCDC9-202ENST00000595659 MGAT4CQ9UBM8 478 aa12.07□□□□□ -0.48
CCDC9-202ENST00000595659 RTL8CO15255 209 aa12.06□□□□□ -0.48
CCDC9-202ENST00000595659 IL7P13232 177 aa12.06□□□□□ -0.48
CCDC9-202ENST00000595659 CXCL3P19876 107 aa12.06□□□□□ -0.48
CCDC9-202ENST00000595659 AZU1P20160 251 aa12.06□□□□□ -0.48
CCDC9-202ENST00000595659 SELENOTP62341 195 aa12.06□□□□□ -0.48
CCDC9-202ENST00000595659 OXA1LQ15070 435 aa12.06□□□□□ -0.48
CCDC9-202ENST00000595659 FCN2Q15485 313 aa12.06□□□□□ -0.48
CCDC9-202ENST00000595659 FAM210BQ96KR6 192 aa12.06□□□□□ -0.48
CCDC9-202ENST00000595659 ARV1Q9H2C2 271 aa12.06□□□□□ -0.48
CCDC9-202ENST00000595659 RCL1Q9Y2P8 373 aaKnown RBP12.06□□□□□ -0.48
CCDC9-202ENST00000595659 PRSS29PA6NIE9 313 aa12.05□□□□□ -0.48
CCDC9-202ENST00000595659 BOLA2-SMG1P6H3BVE0 249 aa12.05□□□□□ -0.48
CCDC9-202ENST00000595659 MBPP02686 304 aaPredicted RBP12.05□□□□□ -0.48
CCDC9-202ENST00000595659 DEFB130BP0DP73 79 aa12.05□□□□□ -0.48
CCDC9-202ENST00000595659 DEFB130AP0DP74 79 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms