RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 IGHV3-35A0A0C4DH35 117 aa10.33□□□□□ -0.76
VMP1-217ENST00000593168 ZNF98A6NK75 572 aa10.33□□□□□ -0.76
VMP1-217ENST00000593168 HSPB1P04792 205 aaKnown RBP10.33□□□□□ -0.76
VMP1-217ENST00000593168 ICAM4Q14773 271 aa10.33□□□□□ -0.76
VMP1-217ENST00000593168 TCTEX1D4Q5JR98 221 aa10.33□□□□□ -0.76
VMP1-217ENST00000593168 GPHB5Q86YW7 130 aa10.33□□□□□ -0.76
VMP1-217ENST00000593168 TXNDC17Q9BRA2 123 aa10.33□□□□□ -0.76
VMP1-217ENST00000593168 PAXXQ9BUH6 204 aa10.33□□□□□ -0.76
VMP1-217ENST00000593168 ARL2-SNX15V9GYD0 113 aa10.33□□□□□ -0.76
VMP1-217ENST00000593168 TMEM218A2RU14 115 aa10.32□□□□□ -0.76
VMP1-217ENST00000593168 CLPSL1A2RUU4 121 aa10.32□□□□□ -0.76
VMP1-217ENST00000593168 KRBOX1C9JBD0 128 aa10.32□□□□□ -0.76
VMP1-217ENST00000593168 I3L521 148 aa10.32□□□□□ -0.76
VMP1-217ENST00000593168 RXFP4Q8TDU9 374 aa10.32□□□□□ -0.76
VMP1-217ENST00000593168 FXYD5Q96DB9 178 aa10.32□□□□□ -0.76
VMP1-217ENST00000593168 OR5B12Q96R08 314 aa10.32□□□□□ -0.76
VMP1-217ENST00000593168 METTL26Q96S19 204 aa10.32□□□□□ -0.76
VMP1-217ENST00000593168 TMEM231Q9H6L2 316 aa10.32□□□□□ -0.76
VMP1-217ENST00000593168 U3KQE9 123 aa10.32□□□□□ -0.76
VMP1-217ENST00000593168 C9JQL5 133 aa10.31□□□□□ -0.76
VMP1-217ENST00000593168 K7EMT4 169 aa10.31□□□□□ -0.76
VMP1-217ENST00000593168 PAGE4O60829 102 aa10.31□□□□□ -0.76
VMP1-217ENST00000593168 HIST1H1EP10412 219 aaKnown RBP10.31□□□□□ -0.76
VMP1-217ENST00000593168 GP9P14770 177 aa10.31□□□□□ -0.76
VMP1-217ENST00000593168 NPPCP23582 126 aa10.31□□□□□ -0.76
VMP1-217ENST00000593168 CRYBB3P26998 211 aa10.31□□□□□ -0.76
VMP1-217ENST00000593168 UBE2L3P68036 154 aaKnown RBP10.31□□□□□ -0.76
VMP1-217ENST00000593168 MEF2BQ02080 365 aaPredicted RBP10.31□□□□□ -0.76
VMP1-217ENST00000593168 FAM106AQ4KMX7 169 aa10.31□□□□□ -0.76
VMP1-217ENST00000593168 LEMD1Q68G75 181 aa10.31□□□□□ -0.76
VMP1-217ENST00000593168 BPIFA4PQ86YQ2 179 aa10.31□□□□□ -0.76
VMP1-217ENST00000593168 TMEM190Q8WZ59 177 aa10.31□□□□□ -0.76
VMP1-217ENST00000593168 SLC35B3Q9H1N7 401 aa10.31□□□□□ -0.76
VMP1-217ENST00000593168 RNF114Q9Y508 228 aa10.31□□□□□ -0.76
VMP1-217ENST00000593168 A0A1B0GUS0 222 aa10.3□□□□□ -0.76
VMP1-217ENST00000593168 A0A1W2PRE2 83 aa10.3□□□□□ -0.76
VMP1-217ENST00000593168 FAM74A7A6NL05 159 aa10.3□□□□□ -0.76
VMP1-217ENST00000593168 MRPS12O15235 138 aaKnown RBP10.3□□□□□ -0.76
VMP1-217ENST00000593168 BUB3O43684 328 aa10.3□□□□□ -0.76
VMP1-217ENST00000593168 SRP19P09132 144 aaKnown RBP10.3□□□□□ -0.76
VMP1-217ENST00000593168 OR10J4P0C629 311 aa10.3□□□□□ -0.76
VMP1-217ENST00000593168 PYYP10082 97 aa10.3□□□□□ -0.76
VMP1-217ENST00000593168 RPL7P18124 248 aaKnown RBP10.3□□□□□ -0.76
VMP1-217ENST00000593168 PROK1P58294 105 aa10.3□□□□□ -0.76
VMP1-217ENST00000593168 C1orf194Q5T5A4 169 aa10.3□□□□□ -0.76
VMP1-217ENST00000593168 C4orf3Q8WVX3 66 aa10.3□□□□□ -0.76
VMP1-217ENST00000593168 NARS2Q96I59 477 aaKnown RBP10.3□□□□□ -0.76
VMP1-217ENST00000593168 C20orf24Q9BUV8 137 aa10.3□□□□□ -0.76
VMP1-217ENST00000593168 NKX6-2Q9C056 277 aaPredicted RBP10.3□□□□□ -0.76
VMP1-217ENST00000593168 IGHV3OR16-8A0A075B7F1 116 aa10.29□□□□□ -0.76
VMP1-217ENST00000593168 NBEAP1P0C6P0 100 aa10.29□□□□□ -0.76
VMP1-217ENST00000593168 ZP3P21754 424 aa10.29□□□□□ -0.76
VMP1-217ENST00000593168 CD81P60033 236 aa10.29□□□□□ -0.76
VMP1-217ENST00000593168 UBE2G2P60604 165 aa10.29□□□□□ -0.76
VMP1-217ENST00000593168 RPEL1Q2QD12 228 aa10.29□□□□□ -0.76
VMP1-217ENST00000593168 CST9LP1Q5W188 147 aa10.29□□□□□ -0.76
VMP1-217ENST00000593168 UNQ9165/PRO28630Q6UXU0 137 aa10.29□□□□□ -0.76
VMP1-217ENST00000593168 GPR82Q96P67 336 aa10.29□□□□□ -0.76
VMP1-217ENST00000593168 WNK1Q9H4A3 2382 aa10.28□□□□□ -0.76
VMP1-217ENST00000593168 IGHV4OR15-8A0A075B7B6 117 aa10.28□□□□□ -0.76
VMP1-217ENST00000593168 A0A087WW49 117 aa10.28□□□□□ -0.76
VMP1-217ENST00000593168 ZNF320A2RRD8 509 aa10.28□□□□□ -0.76
VMP1-217ENST00000593168 C11orf94C9JXX5 98 aa10.28□□□□□ -0.76
VMP1-217ENST00000593168 TMEM250H0YL14 139 aa10.28□□□□□ -0.76
VMP1-217ENST00000593168 LGALS9O00182 355 aa10.28□□□□□ -0.76
VMP1-217ENST00000593168 SFTA3P0C7M3 94 aa10.28□□□□□ -0.76
VMP1-217ENST00000593168 IGLC2P0DOY2 106 aa10.28□□□□□ -0.76
VMP1-217ENST00000593168 CD28P10747 220 aa10.28□□□□□ -0.76
VMP1-217ENST00000593168 C10orf91Q5T1B1 145 aa10.28□□□□□ -0.76
VMP1-217ENST00000593168 HIST2H2BDQ6DRA6 164 aa10.28□□□□□ -0.76
VMP1-217ENST00000593168 REC114Q7Z4M0 266 aa10.28□□□□□ -0.76
VMP1-217ENST00000593168 OR8I2Q8N0Y5 310 aa10.28□□□□□ -0.76
VMP1-217ENST00000593168 OR4F17Q8NGA8 305 aa10.28□□□□□ -0.76
VMP1-217ENST00000593168 LINC00052Q96N35 136 aa10.28□□□□□ -0.76
VMP1-217ENST00000593168 OR4F4Q96R69 305 aa10.28□□□□□ -0.76
VMP1-217ENST00000593168 SEC11CQ9BY50 192 aa10.28□□□□□ -0.76
VMP1-217ENST00000593168 ZNF586Q9NXT0 402 aa10.28□□□□□ -0.76
VMP1-217ENST00000593168 YTHDF2Q9Y5A9 579 aaKnown RBP10.28□□□□□ -0.76
VMP1-217ENST00000593168 A0A1W2PS18 150 aa10.27□□□□□ -0.77
VMP1-217ENST00000593168 F6UZH7 168 aa10.27□□□□□ -0.77
VMP1-217ENST00000593168 F8W036 122 aa10.27□□□□□ -0.77
VMP1-217ENST00000593168 H3BQ15 152 aa10.27□□□□□ -0.77
VMP1-217ENST00000593168 PDE6DO43924 150 aa10.27□□□□□ -0.77
VMP1-217ENST00000593168 ATP5G3P48201 142 aa10.27□□□□□ -0.77
VMP1-217ENST00000593168 KRTAP10-3P60369 221 aa10.27□□□□□ -0.77
VMP1-217ENST00000593168 KHDC1LQ5JSQ8 128 aa10.27□□□□□ -0.77
VMP1-217ENST00000593168 CCDC28AQ8IWP9 274 aa10.27□□□□□ -0.77
VMP1-217ENST00000593168 DPF1Q92782 380 aa10.27□□□□□ -0.77
VMP1-217ENST00000593168 CITED1Q99966 193 aa10.27□□□□□ -0.77
VMP1-217ENST00000593168 DAZ1Q9NQZ3 744 aaKnown RBP10.27□□□□□ -0.77
VMP1-217ENST00000593168 UFC1Q9Y3C8 167 aa10.27□□□□□ -0.77
VMP1-217ENST00000593168 TSSC4Q9Y5U2 329 aaPredicted RBP10.27□□□□□ -0.77
VMP1-217ENST00000593168 LINC01619G3V211 115 aa10.26□□□□□ -0.77
VMP1-217ENST00000593168 ZNF207O43670 478 aaKnown RBP10.26□□□□□ -0.77
VMP1-217ENST00000593168 APOHP02749 345 aaPredicted RBP10.26□□□□□ -0.77
VMP1-217ENST00000593168 ADCYAP1P18509 176 aa10.26□□□□□ -0.77
VMP1-217ENST00000593168 HOXD3P31249 432 aaPredicted RBP10.26□□□□□ -0.77
VMP1-217ENST00000593168 MYCNOSP40205 109 aa10.26□□□□□ -0.77
VMP1-217ENST00000593168 KLF5Q13887 457 aaPredicted RBP10.26□□□□□ -0.77
VMP1-217ENST00000593168 PDE6HQ13956 83 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms