RNA–Protein interactions for RNA: ENST00000593008.1

DDX39A-220, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 538 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-220ENST00000593008 ZNF256Q9Y2P7 627 aaPredicted RBP7.25□□□□□ -1.25
DDX39A-220ENST00000593008 TIMM9Q9Y5J7 89 aa7.25□□□□□ -1.25
DDX39A-220ENST00000593008 SMAD5-AS1Q9Y6J3 95 aa7.25□□□□□ -1.25
DDX39A-220ENST00000593008 A0A1B0GV50 99 aa7.24□□□□□ -1.25
DDX39A-220ENST00000593008 A0A1W2PS18 150 aa7.24□□□□□ -1.25
DDX39A-220ENST00000593008 ZNF98A6NK75 572 aa7.24□□□□□ -1.25
DDX39A-220ENST00000593008 C17orf112F2Z3M2 114 aa7.24□□□□□ -1.25
DDX39A-220ENST00000593008 K7EMT4 169 aa7.24□□□□□ -1.25
DDX39A-220ENST00000593008 MRPS12O15235 138 aaKnown RBP7.24□□□□□ -1.25
DDX39A-220ENST00000593008 BUB3O43684 328 aa7.24□□□□□ -1.25
DDX39A-220ENST00000593008 PYYP10082 97 aa7.24□□□□□ -1.25
DDX39A-220ENST00000593008 SPP1P10451 314 aa7.24□□□□□ -1.25
DDX39A-220ENST00000593008 NPPCP23582 126 aa7.24□□□□□ -1.25
DDX39A-220ENST00000593008 DEFB1P60022 68 aa7.24□□□□□ -1.25
DDX39A-220ENST00000593008 DEFB114Q30KQ6 69 aa7.24□□□□□ -1.25
DDX39A-220ENST00000593008 C16orf54Q6UWD8 224 aa7.24□□□□□ -1.25
DDX39A-220ENST00000593008 ALKAL2Q6UX46 152 aa7.24□□□□□ -1.25
DDX39A-220ENST00000593008 TCF24Q7RTU0 167 aa7.24□□□□□ -1.25
DDX39A-220ENST00000593008 BAP18Q8IXM2 172 aa7.24□□□□□ -1.25
DDX39A-220ENST00000593008 RPP25LQ8N5L8 163 aaKnown RBP7.24□□□□□ -1.25
DDX39A-220ENST00000593008 PCNPQ8WW12 178 aaKnown RBP7.24□□□□□ -1.25
DDX39A-220ENST00000593008 ZNF503Q96F45 646 aa7.24□□□□□ -1.25
DDX39A-220ENST00000593008 FAM167A-AS1Q96KT0 104 aa7.24□□□□□ -1.25
DDX39A-220ENST00000593008 PSMG3Q9BT73 122 aaPredicted RBP7.24□□□□□ -1.25
DDX39A-220ENST00000593008 TMEM231Q9H6L2 316 aa7.24□□□□□ -1.25
DDX39A-220ENST00000593008 RPRMQ9NS64 109 aa7.24□□□□□ -1.25
DDX39A-220ENST00000593008 IGLV1-51P01701 117 aa7.23□□□□□ -1.25
DDX39A-220ENST00000593008 TPT1P13693 172 aaKnown RBP7.23□□□□□ -1.25
DDX39A-220ENST00000593008 CMC4P56277 68 aaPredicted RBP7.23□□□□□ -1.25
DDX39A-220ENST00000593008 FAM78BQ5VT40 261 aa7.23□□□□□ -1.25
DDX39A-220ENST00000593008 FAM90A2PQ658T7 463 aa7.23□□□□□ -1.25
DDX39A-220ENST00000593008 IGFL4Q6B9Z1 124 aa7.23□□□□□ -1.25
DDX39A-220ENST00000593008 Q6ZRG5 221 aa7.23□□□□□ -1.25
DDX39A-220ENST00000593008 SLC51BQ86UW2 128 aa7.23□□□□□ -1.25
DDX39A-220ENST00000593008 OR10G4Q8NGN3 311 aa7.23□□□□□ -1.25
DDX39A-220ENST00000593008 OR10G9Q8NGN4 311 aa7.23□□□□□ -1.25
DDX39A-220ENST00000593008 OR10G7Q8NGN6 311 aa7.23□□□□□ -1.25
DDX39A-220ENST00000593008 OR2K2Q8NGT1 345 aa7.23□□□□□ -1.25
DDX39A-220ENST00000593008 WFDC10AQ9H1F0 79 aa7.23□□□□□ -1.25
DDX39A-220ENST00000593008 DNAJC4Q9NNZ3 241 aa7.23□□□□□ -1.25
DDX39A-220ENST00000593008 SIGLEC8Q9NYZ4 499 aa7.23□□□□□ -1.25
DDX39A-220ENST00000593008 TECRQ9NZ01 308 aaKnown RBP7.23□□□□□ -1.25
DDX39A-220ENST00000593008 DNAH9Q9NYC9 4486 aa7.23□□□□□ -1.25
DDX39A-220ENST00000593008 H3BQ15 152 aa7.22□□□□□ -1.25
DDX39A-220ENST00000593008 SLC17A3O00476 420 aa7.22□□□□□ -1.25
DDX39A-220ENST00000593008 OR10J4P0C629 311 aa7.22□□□□□ -1.25
DDX39A-220ENST00000593008 GP9P14770 177 aa7.22□□□□□ -1.25
DDX39A-220ENST00000593008 HLA-DMBP28068 263 aa7.22□□□□□ -1.25
DDX39A-220ENST00000593008 FGF8P55075 233 aaPredicted RBP7.22□□□□□ -1.25
DDX39A-220ENST00000593008 ZNF124Q15973 351 aa7.22□□□□□ -1.25
DDX39A-220ENST00000593008 TMEM41BQ5BJD5 291 aa7.22□□□□□ -1.25
DDX39A-220ENST00000593008 WFDC3Q8IUB2 231 aa7.22□□□□□ -1.25
DDX39A-220ENST00000593008 STXBP6Q8NFX7 210 aa7.22□□□□□ -1.25
DDX39A-220ENST00000593008 OR1L4Q8NGR5 311 aa7.22□□□□□ -1.25
DDX39A-220ENST00000593008 FAM213BQ8TBF2 198 aa7.22□□□□□ -1.25
DDX39A-220ENST00000593008 GNPNAT1Q96EK6 184 aaPredicted RBP7.22□□□□□ -1.25
DDX39A-220ENST00000593008 GRAMD2BQ96HH9 432 aa7.22□□□□□ -1.25
DDX39A-220ENST00000593008 KCNIP2Q9NS61 270 aa7.22□□□□□ -1.25
DDX39A-220ENST00000593008 FUT9Q9Y231 359 aa7.22□□□□□ -1.25
DDX39A-220ENST00000593008 ZNF785A8K8V0 405 aa7.21□□□□□ -1.26
DDX39A-220ENST00000593008 M6PRP20645 277 aa7.21□□□□□ -1.26
DDX39A-220ENST00000593008 CDC34P49427 236 aaPredicted RBP7.21□□□□□ -1.26
DDX39A-220ENST00000593008 RPL11P62913 178 aaKnown RBP7.21□□□□□ -1.26
DDX39A-220ENST00000593008 PAFAH1B2P68402 229 aa7.21□□□□□ -1.26
DDX39A-220ENST00000593008 GUCA2BQ16661 112 aa7.21□□□□□ -1.26
DDX39A-220ENST00000593008 ACOT6Q3I5F7 207 aaPredicted RBP7.21□□□□□ -1.26
DDX39A-220ENST00000593008 LCN15Q6UWW0 184 aa7.21□□□□□ -1.26
DDX39A-220ENST00000593008 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.21□□□□□ -1.26
DDX39A-220ENST00000593008 SIGLEC15Q6ZMC9 328 aa7.21□□□□□ -1.26
DDX39A-220ENST00000593008 OR8I2Q8N0Y5 310 aa7.21□□□□□ -1.26
DDX39A-220ENST00000593008 GATAD1Q8WUU5 269 aa7.21□□□□□ -1.26
DDX39A-220ENST00000593008 RAB24Q969Q5 203 aa7.21□□□□□ -1.26
DDX39A-220ENST00000593008 ASCL2Q99929 193 aa7.21□□□□□ -1.26
DDX39A-220ENST00000593008 B9D2Q9BPU9 175 aa7.21□□□□□ -1.26
DDX39A-220ENST00000593008 MS4A6AQ9H2W1 248 aa7.21□□□□□ -1.26
DDX39A-220ENST00000593008 TMPRSS5Q9H3S3 457 aa7.21□□□□□ -1.26
DDX39A-220ENST00000593008 COL7A1Q02388 2944 aa7.21□□□□□ -1.26
DDX39A-220ENST00000593008 HUWE1Q7Z6Z7 4374 aaKnown RBP7.2□□□□□ -1.26
DDX39A-220ENST00000593008 TRAV8-2A0A0B4J237 113 aa7.2□□□□□ -1.26
DDX39A-220ENST00000593008 SOCS3O14543 225 aa7.2□□□□□ -1.26
DDX39A-220ENST00000593008 CD7P09564 240 aa7.2□□□□□ -1.26
DDX39A-220ENST00000593008 SEC11BP0C7V7 166 aa7.2□□□□□ -1.26
DDX39A-220ENST00000593008 ARL14EPLP0DKL9 152 aa7.2□□□□□ -1.26
DDX39A-220ENST00000593008 IGLC2P0DOY2 106 aa7.2□□□□□ -1.26
DDX39A-220ENST00000593008 AKR1C8PQ5T2L2 129 aa7.2□□□□□ -1.26
DDX39A-220ENST00000593008 PXDC1Q5TGL8 231 aa7.2□□□□□ -1.26
DDX39A-220ENST00000593008 RNF182Q8N6D2 247 aa7.2□□□□□ -1.26
DDX39A-220ENST00000593008 FXYD5Q96DB9 178 aa7.2□□□□□ -1.26
DDX39A-220ENST00000593008 PHYHIPLQ96FC7 376 aa7.2□□□□□ -1.26
DDX39A-220ENST00000593008 C20orf173Q96LM9 149 aa7.2□□□□□ -1.26
DDX39A-220ENST00000593008 PFDN5Q99471 154 aa7.2□□□□□ -1.26
DDX39A-220ENST00000593008 ZNF586Q9NXT0 402 aa7.2□□□□□ -1.26
DDX39A-220ENST00000593008 UBQLN2Q9UHD9 624 aa7.2□□□□□ -1.26
DDX39A-220ENST00000593008 ELOA3CA0A087WX78 387 aaPredicted RBP7.19□□□□□ -1.26
DDX39A-220ENST00000593008 TRAV25A0A0B4J276 109 aa7.19□□□□□ -1.26
DDX39A-220ENST00000593008 TEX46H3BTG2 121 aa7.19□□□□□ -1.26
DDX39A-220ENST00000593008 OR7C2O60412 319 aa7.19□□□□□ -1.26
DDX39A-220ENST00000593008 RHOBP62745 196 aa7.19□□□□□ -1.26
DDX39A-220ENST00000593008 UBE2L3P68036 154 aaKnown RBP7.19□□□□□ -1.26
DDX39A-220ENST00000593008 IFITM2Q01629 132 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms