RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 FAM25EA8MYX2 175 aa10.02□□□□□ -0.81
APOC1-208ENST00000592535 FNDC10F2Z333 226 aa10.02□□□□□ -0.81
APOC1-208ENST00000592535 LINC00869P0C866 280 aa10.02□□□□□ -0.81
APOC1-208ENST00000592535 OR4B1Q8NGF8 309 aa10.02□□□□□ -0.81
APOC1-208ENST00000592535 SLC25A39Q9BZJ4 359 aaPredicted RBP10.02□□□□□ -0.81
APOC1-208ENST00000592535 HRH4Q9H3N8 390 aa10.02□□□□□ -0.81
APOC1-208ENST00000592535 NPVFQ9HCQ7 196 aa10.02□□□□□ -0.81
APOC1-208ENST00000592535 MGAT4CQ9UBM8 478 aa10.02□□□□□ -0.81
APOC1-208ENST00000592535 HIGD1AQ9Y241 93 aa10.02□□□□□ -0.81
APOC1-208ENST00000592535 A0A1B0GVG6 124 aa10.01□□□□□ -0.81
APOC1-208ENST00000592535 OR5G3P0C626 314 aa10.01□□□□□ -0.81
APOC1-208ENST00000592535 HLA-DMBP28068 263 aa10.01□□□□□ -0.81
APOC1-208ENST00000592535 S100A7P31151 101 aa10.01□□□□□ -0.81
APOC1-208ENST00000592535 PLP1P60201 277 aa10.01□□□□□ -0.81
APOC1-208ENST00000592535 RAP2BP61225 183 aa10.01□□□□□ -0.81
APOC1-208ENST00000592535 SELENOTP62341 195 aa10.01□□□□□ -0.81
APOC1-208ENST00000592535 SLC38A11Q08AI6 406 aa10.01□□□□□ -0.81
APOC1-208ENST00000592535 FAM78BQ5VT40 261 aa10.01□□□□□ -0.81
APOC1-208ENST00000592535 SAMD13Q5VXD3 122 aa10.01□□□□□ -0.81
APOC1-208ENST00000592535 EBLN2Q6P2I7 272 aa10.01□□□□□ -0.81
APOC1-208ENST00000592535 C12orf45Q8N5I9 185 aaPredicted RBP10.01□□□□□ -0.81
APOC1-208ENST00000592535 ZNF709Q8N972 641 aa10.01□□□□□ -0.81
APOC1-208ENST00000592535 C2CD4CQ8TF44 421 aa10.01□□□□□ -0.81
APOC1-208ENST00000592535 CLUHP3Q96NS8 147 aa10.01□□□□□ -0.81
APOC1-208ENST00000592535 GPR82Q96P67 336 aa10.01□□□□□ -0.81
APOC1-208ENST00000592535 UHRF2Q96PU4 802 aa10.01□□□□□ -0.81
APOC1-208ENST00000592535 SHANK2-AS3Q9BTD1 123 aa10.01□□□□□ -0.81
APOC1-208ENST00000592535 SLC35B3Q9H1N7 401 aa10.01□□□□□ -0.81
APOC1-208ENST00000592535 RPRMQ9NS64 109 aa10.01□□□□□ -0.81
APOC1-208ENST00000592535 CELA1Q9UNI1 258 aa10.01□□□□□ -0.81
APOC1-208ENST00000592535 LSM5Q9Y4Y9 91 aaKnown RBP10.01□□□□□ -0.81
APOC1-208ENST00000592535 A0A0J9YX75 114 aa10□□□□□ -0.81
APOC1-208ENST00000592535 C5orf51A6NDU8 294 aa10□□□□□ -0.81
APOC1-208ENST00000592535 K7EPK0 472 aa10□□□□□ -0.81
APOC1-208ENST00000592535 L7N2F9 121 aa10□□□□□ -0.81
APOC1-208ENST00000592535 PRAF2O60831 178 aa10□□□□□ -0.81
APOC1-208ENST00000592535 HYPMO75409 117 aa10□□□□□ -0.81
APOC1-208ENST00000592535 VAMP2P63027 116 aa10□□□□□ -0.81
APOC1-208ENST00000592535 SPATA31B1PQ5VZV4 182 aa10□□□□□ -0.81
APOC1-208ENST00000592535 IGFL4Q6B9Z1 124 aa10□□□□□ -0.81
APOC1-208ENST00000592535 TEPPQ6URK8 271 aa10□□□□□ -0.81
APOC1-208ENST00000592535 ZNF705AQ6ZN79 300 aaPredicted RBP10□□□□□ -0.81
APOC1-208ENST00000592535 IGHV3OR16-12A0A075B7B8 117 aa9.99□□□□□ -0.81
APOC1-208ENST00000592535 TRAV8-2A0A0B4J237 113 aa9.99□□□□□ -0.81
APOC1-208ENST00000592535 ZNF705FA8MVS1 300 aaPredicted RBP9.99□□□□□ -0.81
APOC1-208ENST00000592535 C11orf94C9JXX5 98 aa9.99□□□□□ -0.81
APOC1-208ENST00000592535 ZNF705DP0CH99 300 aaPredicted RBP9.99□□□□□ -0.81
APOC1-208ENST00000592535 ZNF705BP0CI00 300 aaPredicted RBP9.99□□□□□ -0.81
APOC1-208ENST00000592535 BCAP31P51572 246 aa9.99□□□□□ -0.81
APOC1-208ENST00000592535 PSG9Q00887 426 aa9.99□□□□□ -0.81
APOC1-208ENST00000592535 FGL1Q08830 312 aa9.99□□□□□ -0.81
APOC1-208ENST00000592535 PATE2Q6UY27 113 aa9.99□□□□□ -0.81
APOC1-208ENST00000592535 Q6ZTC4 211 aa9.99□□□□□ -0.81
APOC1-208ENST00000592535 RNF182Q8N6D2 247 aa9.99□□□□□ -0.81
APOC1-208ENST00000592535 C2orf50Q96LR7 162 aa9.99□□□□□ -0.81
APOC1-208ENST00000592535 ARL6Q9H0F7 186 aa9.99□□□□□ -0.81
APOC1-208ENST00000592535 C11orf1Q9H5F2 150 aa9.99□□□□□ -0.81
APOC1-208ENST00000592535 FAM24AA6NFZ4 105 aa9.98□□□□□ -0.81
APOC1-208ENST00000592535 A8MTW9 85 aa9.98□□□□□ -0.81
APOC1-208ENST00000592535 AGPAT2O15120 278 aa9.98□□□□□ -0.81
APOC1-208ENST00000592535 DEDDO75618 318 aa9.98□□□□□ -0.81
APOC1-208ENST00000592535 RPL7P18124 248 aaKnown RBP9.98□□□□□ -0.81
APOC1-208ENST00000592535 LGALS9CQ6DKI2 356 aa9.98□□□□□ -0.81
APOC1-208ENST00000592535 ZNF767PQ75MW2 155 aa9.98□□□□□ -0.81
APOC1-208ENST00000592535 ZNF546Q86UE3 836 aa9.98□□□□□ -0.81
APOC1-208ENST00000592535 NEU1Q99519 415 aa9.98□□□□□ -0.81
APOC1-208ENST00000592535 MGST2Q99735 147 aa9.98□□□□□ -0.81
APOC1-208ENST00000592535 GGACTQ9BVM4 153 aa9.98□□□□□ -0.81
APOC1-208ENST00000592535 ARV1Q9H2C2 271 aa9.98□□□□□ -0.81
APOC1-208ENST00000592535 ALG5Q9Y673 324 aa9.98□□□□□ -0.81
APOC1-208ENST00000592535 EPPK1P58107 5090 aaKnown RBP9.97□□□□□ -0.81
APOC1-208ENST00000592535 TRAV10A0A0B4J240 114 aa9.97□□□□□ -0.81
APOC1-208ENST00000592535 IGLL5B9A064 214 aa9.97□□□□□ -0.81
APOC1-208ENST00000592535 GOSR2O14653 212 aa9.97□□□□□ -0.81
APOC1-208ENST00000592535 CST7O76096 145 aa9.97□□□□□ -0.81
APOC1-208ENST00000592535 CAV2P51636 162 aa9.97□□□□□ -0.81
APOC1-208ENST00000592535 IL15RAQ13261 267 aa9.97□□□□□ -0.81
APOC1-208ENST00000592535 C12orf74Q32Q52 190 aa9.97□□□□□ -0.81
APOC1-208ENST00000592535 AMTNQ6UX39 209 aa9.97□□□□□ -0.81
APOC1-208ENST00000592535 CHAC2Q8WUX2 184 aa9.97□□□□□ -0.81
APOC1-208ENST00000592535 APLNQ9ULZ1 77 aa9.97□□□□□ -0.81
APOC1-208ENST00000592535 A0A087X0K7 114 aa9.96□□□□□ -0.82
APOC1-208ENST00000592535 SMIM9A6NGZ8 99 aa9.96□□□□□ -0.82
APOC1-208ENST00000592535 MRPS12O15235 138 aaKnown RBP9.96□□□□□ -0.82
APOC1-208ENST00000592535 CNN1P51911 297 aaKnown RBP9.96□□□□□ -0.82
APOC1-208ENST00000592535 TCTAP57738 103 aa9.96□□□□□ -0.82
APOC1-208ENST00000592535 S100A10P60903 97 aa9.96□□□□□ -0.82
APOC1-208ENST00000592535 RAB32Q13637 225 aa9.96□□□□□ -0.82
APOC1-208ENST00000592535 PXDC1Q5TGL8 231 aa9.96□□□□□ -0.82
APOC1-208ENST00000592535 S100A7AQ86SG5 101 aa9.96□□□□□ -0.82
APOC1-208ENST00000592535 C1orf158Q8N1D5 194 aa9.96□□□□□ -0.82
APOC1-208ENST00000592535 RPP25LQ8N5L8 163 aaKnown RBP9.96□□□□□ -0.82
APOC1-208ENST00000592535 PVALBP20472 110 aaPredicted RBP9.95□□□□□ -0.82
APOC1-208ENST00000592535 EMP1P54849 157 aa9.95□□□□□ -0.82
APOC1-208ENST00000592535 LINC00305Q7Z4B0 112 aa9.95□□□□□ -0.82
APOC1-208ENST00000592535 ZNF738Q8NE65 137 aa9.95□□□□□ -0.82
APOC1-208ENST00000592535 OR11H7Q8NGC8 314 aa9.95□□□□□ -0.82
APOC1-208ENST00000592535 GPN1Q9HCN4 374 aaPredicted RBP9.95□□□□□ -0.82
APOC1-208ENST00000592535 GOLT1BQ9Y3E0 138 aa9.95□□□□□ -0.82
APOC1-208ENST00000592535 RFNGQ9Y644 331 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms