RNA–Protein interactions for RNA: ENST00000591239.1

DNMT1-223, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-223ENST00000591239 S100A7AQ86SG5 101 aa6.73□□□□□ -1.33
DNMT1-223ENST00000591239 ZNF546Q86UE3 836 aa6.73□□□□□ -1.33
DNMT1-223ENST00000591239 STX12Q86Y82 276 aa6.73□□□□□ -1.33
DNMT1-223ENST00000591239 GATAD1Q8WUU5 269 aa6.73□□□□□ -1.33
DNMT1-223ENST00000591239 LINC00052Q96N35 136 aa6.73□□□□□ -1.33
DNMT1-223ENST00000591239 GPR82Q96P67 336 aa6.73□□□□□ -1.33
DNMT1-223ENST00000591239 UHRF2Q96PU4 802 aa6.73□□□□□ -1.33
DNMT1-223ENST00000591239 LYSTQ99698 3801 aa6.73□□□□□ -1.33
DNMT1-223ENST00000591239 MGST2Q99735 147 aa6.73□□□□□ -1.33
DNMT1-223ENST00000591239 SHANK2-AS3Q9BTD1 123 aa6.73□□□□□ -1.33
DNMT1-223ENST00000591239 RSG1Q9BU20 258 aa6.73□□□□□ -1.33
DNMT1-223ENST00000591239 SCRT1Q9BWW7 348 aa6.73□□□□□ -1.33
DNMT1-223ENST00000591239 UQCC1Q9NVA1 299 aa6.73□□□□□ -1.33
DNMT1-223ENST00000591239 STARD9Q9P2P6 4700 aa6.72□□□□□ -1.33
DNMT1-223ENST00000591239 A0A0J9YWU9 116 aa6.72□□□□□ -1.33
DNMT1-223ENST00000591239 E5RGE8 158 aa6.72□□□□□ -1.33
DNMT1-223ENST00000591239 H3BMM0 161 aa6.72□□□□□ -1.33
DNMT1-223ENST00000591239 ISLRO14498 428 aa6.72□□□□□ -1.33
DNMT1-223ENST00000591239 SPP1P10451 314 aa6.72□□□□□ -1.33
DNMT1-223ENST00000591239 CAMLGP49069 296 aa6.72□□□□□ -1.33
DNMT1-223ENST00000591239 MEOX2P50222 304 aa6.72□□□□□ -1.33
DNMT1-223ENST00000591239 VWC2Q2TAL6 325 aa6.72□□□□□ -1.33
DNMT1-223ENST00000591239 PXDC1Q5TGL8 231 aa6.72□□□□□ -1.33
DNMT1-223ENST00000591239 SAMD13Q5VXD3 122 aa6.72□□□□□ -1.33
DNMT1-223ENST00000591239 MORN3Q6PF18 240 aaPredicted RBP6.72□□□□□ -1.33
DNMT1-223ENST00000591239 PATE2Q6UY27 113 aa6.72□□□□□ -1.33
DNMT1-223ENST00000591239 IL17DQ8TAD2 202 aa6.72□□□□□ -1.33
DNMT1-223ENST00000591239 C16orf92Q96LL3 132 aa6.72□□□□□ -1.33
DNMT1-223ENST00000591239 C17orf77Q96MU5 243 aa6.72□□□□□ -1.33
DNMT1-223ENST00000591239 RARRES2Q99969 163 aa6.72□□□□□ -1.33
DNMT1-223ENST00000591239 ARV1Q9H2C2 271 aa6.72□□□□□ -1.33
DNMT1-223ENST00000591239 OR5AC2Q9NZP5 309 aa6.72□□□□□ -1.33
DNMT1-223ENST00000591239 WDR83OSQ9Y284 106 aa6.72□□□□□ -1.33
DNMT1-223ENST00000591239 UBE2L5PA0A1B0GUS4 154 aa6.71□□□□□ -1.34
DNMT1-223ENST00000591239 H0YIZ8 118 aa6.71□□□□□ -1.34
DNMT1-223ENST00000591239 PTTG1O95997 202 aa6.71□□□□□ -1.34
DNMT1-223ENST00000591239 HLA-DRB4P13762 266 aa6.71□□□□□ -1.34
DNMT1-223ENST00000591239 RPL7P18124 248 aaKnown RBP6.71□□□□□ -1.34
DNMT1-223ENST00000591239 C4BPBP20851 252 aa6.71□□□□□ -1.34
DNMT1-223ENST00000591239 DEFB1P60022 68 aa6.71□□□□□ -1.34
DNMT1-223ENST00000591239 NUTF2P61970 127 aaKnown RBP6.71□□□□□ -1.34
DNMT1-223ENST00000591239 NHLH2Q02577 135 aa6.71□□□□□ -1.34
DNMT1-223ENST00000591239 ATP6V1FQ16864 119 aa6.71□□□□□ -1.34
DNMT1-223ENST00000591239 TMEM41BQ5BJD5 291 aa6.71□□□□□ -1.34
DNMT1-223ENST00000591239 GDF5OSQ5U4N7 250 aa6.71□□□□□ -1.34
DNMT1-223ENST00000591239 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.71□□□□□ -1.34
DNMT1-223ENST00000591239 OR11H2Q8NH07 326 aa6.71□□□□□ -1.34
DNMT1-223ENST00000591239 PPP1R1CQ8WVI7 109 aa6.71□□□□□ -1.34
DNMT1-223ENST00000591239 SLC25A31Q9H0C2 315 aa6.71□□□□□ -1.34
DNMT1-223ENST00000591239 HLA-DRB4X5D2U9 266 aa6.71□□□□□ -1.34
DNMT1-223ENST00000591239 ELOA3CA0A087WX78 387 aaPredicted RBP6.7□□□□□ -1.34
DNMT1-223ENST00000591239 COX7A2P2O60397 106 aa6.7□□□□□ -1.34
DNMT1-223ENST00000591239 ATF4P18848 351 aaPredicted RBP6.7□□□□□ -1.34
DNMT1-223ENST00000591239 RPL29P47914 159 aaKnown RBP6.7□□□□□ -1.34
DNMT1-223ENST00000591239 EWSR1Q01844 656 aaKnown RBP eCLIP6.7□□□□□ -1.34
DNMT1-223ENST00000591239 BAXQ07812 192 aa6.7□□□□□ -1.34
DNMT1-223ENST00000591239 FGL1Q08830 312 aa6.7□□□□□ -1.34
DNMT1-223ENST00000591239 MIC13Q5XKP0 118 aa6.7□□□□□ -1.34
DNMT1-223ENST00000591239 FOXI2Q6ZQN5 318 aa6.7□□□□□ -1.34
DNMT1-223ENST00000591239 Q6ZRG5 221 aa6.7□□□□□ -1.34
DNMT1-223ENST00000591239 LINC00305Q7Z4B0 112 aa6.7□□□□□ -1.34
DNMT1-223ENST00000591239 OR5C1Q8NGR4 320 aa6.7□□□□□ -1.34
DNMT1-223ENST00000591239 CHAC2Q8WUX2 184 aa6.7□□□□□ -1.34
DNMT1-223ENST00000591239 TMEM37Q8WXS4 190 aa6.7□□□□□ -1.34
DNMT1-223ENST00000591239 C20orf173Q96LM9 149 aa6.7□□□□□ -1.34
DNMT1-223ENST00000591239 RNF126Q9BV68 326 aa6.7□□□□□ -1.34
DNMT1-223ENST00000591239 SAV1Q9H4B6 383 aaPredicted RBP6.7□□□□□ -1.34
DNMT1-223ENST00000591239 DNAJC4Q9NNZ3 241 aa6.7□□□□□ -1.34
DNMT1-223ENST00000591239 RPRMQ9NS64 109 aa6.7□□□□□ -1.34
DNMT1-223ENST00000591239 RNF24Q9Y225 148 aa6.7□□□□□ -1.34
DNMT1-223ENST00000591239 ALG5Q9Y673 324 aa6.7□□□□□ -1.34
DNMT1-223ENST00000591239 A0A0J9YX75 114 aa6.69□□□□□ -1.34
DNMT1-223ENST00000591239 TMEM238LA0A1B0GVL6 79 aa6.69□□□□□ -1.34
DNMT1-223ENST00000591239 MPDU1O75352 247 aa6.69□□□□□ -1.34
DNMT1-223ENST00000591239 MPC2O95563 127 aa6.69□□□□□ -1.34
DNMT1-223ENST00000591239 IGKV3-20P01619 116 aa6.69□□□□□ -1.34
DNMT1-223ENST00000591239 PET100P0DJ07 73 aa6.69□□□□□ -1.34
DNMT1-223ENST00000591239 FGF7P21781 194 aa6.69□□□□□ -1.34
DNMT1-223ENST00000591239 OPCMLQ14982 345 aa6.69□□□□□ -1.34
DNMT1-223ENST00000591239 MORN5Q5VZ52 161 aa6.69□□□□□ -1.34
DNMT1-223ENST00000591239 C10orf113Q5VZT2 155 aa6.69□□□□□ -1.34
DNMT1-223ENST00000591239 SPATA31B1PQ5VZV4 182 aa6.69□□□□□ -1.34
DNMT1-223ENST00000591239 IGFL4Q6B9Z1 124 aa6.69□□□□□ -1.34
DNMT1-223ENST00000591239 EBLN2Q6P2I7 272 aa6.69□□□□□ -1.34
DNMT1-223ENST00000591239 CSNK1G2-AS1Q8NCQ2 148 aa6.69□□□□□ -1.34
DNMT1-223ENST00000591239 C1QTNF4Q9BXJ3 329 aa6.69□□□□□ -1.34
DNMT1-223ENST00000591239 SLC39A9Q9NUM3 307 aa6.69□□□□□ -1.34
DNMT1-223ENST00000591239 CLEC5AQ9NY25 188 aa6.69□□□□□ -1.34
DNMT1-223ENST00000591239 XCL2Q9UBD3 114 aa6.69□□□□□ -1.34
DNMT1-223ENST00000591239 A0A087X0K7 114 aa6.68□□□□□ -1.34
DNMT1-223ENST00000591239 TRAV8-2A0A0B4J237 113 aa6.68□□□□□ -1.34
DNMT1-223ENST00000591239 ZNF705EA8MWA4 302 aaPredicted RBP6.68□□□□□ -1.34
DNMT1-223ENST00000591239 F6UB75 175 aa6.68□□□□□ -1.34
DNMT1-223ENST00000591239 MRPS12O15235 138 aaKnown RBP6.68□□□□□ -1.34
DNMT1-223ENST00000591239 CXCL3P19876 107 aa6.68□□□□□ -1.34
DNMT1-223ENST00000591239 B2MP61769 119 aa6.68□□□□□ -1.34
DNMT1-223ENST00000591239 CLINT1Q14677 625 aa6.68□□□□□ -1.34
DNMT1-223ENST00000591239 FAM78BQ5VT40 261 aa6.68□□□□□ -1.34
DNMT1-223ENST00000591239 BPIFA4PQ86YQ2 179 aa6.68□□□□□ -1.34
DNMT1-223ENST00000591239 RNF182Q8N6D2 247 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 92.6 ms