RNA–Protein interactions for RNA: ENST00000590260.5

DDX39A-212, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 988 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-212ENST00000590260 OR11H2Q8NH07 326 aa13.25□□□□□ -0.29
DDX39A-212ENST00000590260 TMEM37Q8WXS4 190 aa13.25□□□□□ -0.29
DDX39A-212ENST00000590260 RARRES2Q99969 163 aa13.25□□□□□ -0.29
DDX39A-212ENST00000590260 HLA-DRB4X5D2U9 266 aa13.25□□□□□ -0.29
DDX39A-212ENST00000590260 F6UB75 175 aa13.24□□□□□ -0.29
DDX39A-212ENST00000590260 OR5G3P0C626 314 aa13.24□□□□□ -0.29
DDX39A-212ENST00000590260 SPP1P10451 314 aa13.24□□□□□ -0.29
DDX39A-212ENST00000590260 PRR20EP86478 221 aa13.24□□□□□ -0.29
DDX39A-212ENST00000590260 PRR20CP86479 221 aa13.24□□□□□ -0.29
DDX39A-212ENST00000590260 PRR20DP86480 221 aa13.24□□□□□ -0.29
DDX39A-212ENST00000590260 PRR20BP86481 221 aa13.24□□□□□ -0.29
DDX39A-212ENST00000590260 PRR20AP86496 221 aa13.24□□□□□ -0.29
DDX39A-212ENST00000590260 IGFL4Q6B9Z1 124 aa13.24□□□□□ -0.29
DDX39A-212ENST00000590260 MORN3Q6PF18 240 aaPredicted RBP13.24□□□□□ -0.29
DDX39A-212ENST00000590260 LINC00052Q96N35 136 aa13.24□□□□□ -0.29
DDX39A-212ENST00000590260 ARV1Q9H2C2 271 aa13.24□□□□□ -0.29
DDX39A-212ENST00000590260 SAV1Q9H4B6 383 aaPredicted RBP13.24□□□□□ -0.29
DDX39A-212ENST00000590260 CLEC5AQ9NY25 188 aa13.24□□□□□ -0.29
DDX39A-212ENST00000590260 X6R8D5 127 aa13.24□□□□□ -0.29
DDX39A-212ENST00000590260 ISLRO14498 428 aa13.23□□□□□ -0.29
DDX39A-212ENST00000590260 PVALBP20472 110 aaPredicted RBP13.23□□□□□ -0.29
DDX39A-212ENST00000590260 GALR1P47211 349 aa13.23□□□□□ -0.29
DDX39A-212ENST00000590260 NHLH2Q02577 135 aa13.23□□□□□ -0.29
DDX39A-212ENST00000590260 MIC13Q5XKP0 118 aa13.23□□□□□ -0.29
DDX39A-212ENST00000590260 ZNF546Q86UE3 836 aa13.23□□□□□ -0.29
DDX39A-212ENST00000590260 RNF126Q9BV68 326 aa13.23□□□□□ -0.29
DDX39A-212ENST00000590260 UQCC1Q9NVA1 299 aa13.23□□□□□ -0.29
DDX39A-212ENST00000590260 ALMS1Q8TCU4 4167 aa13.22□□□□□ -0.29
DDX39A-212ENST00000590260 ZNF705EA8MWA4 302 aaPredicted RBP13.22□□□□□ -0.29
DDX39A-212ENST00000590260 DEFB4AO15263 64 aa13.22□□□□□ -0.29
DDX39A-212ENST00000590260 CAMLGP49069 296 aa13.22□□□□□ -0.29
DDX39A-212ENST00000590260 RAP2BP61225 183 aa13.22□□□□□ -0.29
DDX39A-212ENST00000590260 LRRC37A5PQ49AS3 106 aa13.22□□□□□ -0.29
DDX39A-212ENST00000590260 FOXI2Q6ZQN5 318 aa13.22□□□□□ -0.29
DDX39A-212ENST00000590260 ZNF709Q8N972 641 aa13.22□□□□□ -0.29
DDX39A-212ENST00000590260 Q8NAQ8 132 aa13.22□□□□□ -0.29
DDX39A-212ENST00000590260 GPR82Q96P67 336 aa13.22□□□□□ -0.29
DDX39A-212ENST00000590260 HYDINQ4G0P3 5121 aa13.21□□□□□ -0.29
DDX39A-212ENST00000590260 A0A0J9YX75 114 aa13.21□□□□□ -0.29
DDX39A-212ENST00000590260 UBE2L5PA0A1B0GUS4 154 aa13.21□□□□□ -0.29
DDX39A-212ENST00000590260 RBMY1A1P0DJD3 496 aaKnown RBP13.21□□□□□ -0.29
DDX39A-212ENST00000590260 RBMY1CP0DJD4 496 aa13.21□□□□□ -0.29
DDX39A-212ENST00000590260 ATF4P18848 351 aaPredicted RBP13.21□□□□□ -0.29
DDX39A-212ENST00000590260 HLA-DMBP28068 263 aa13.21□□□□□ -0.29
DDX39A-212ENST00000590260 S100A11P31949 105 aa13.21□□□□□ -0.29
DDX39A-212ENST00000590260 ID1P41134 155 aa13.21□□□□□ -0.29
DDX39A-212ENST00000590260 RBMY1FQ15415 496 aaKnown RBP13.21□□□□□ -0.29
DDX39A-212ENST00000590260 RNF182Q8N6D2 247 aa13.21□□□□□ -0.29
DDX39A-212ENST00000590260 PPP1R1CQ8WVI7 109 aa13.21□□□□□ -0.29
DDX39A-212ENST00000590260 C11orf68Q9H3H3 251 aaKnown RBP13.21□□□□□ -0.29
DDX39A-212ENST00000590260 A0A087X0K7 114 aa13.2□□□□□ -0.3
DDX39A-212ENST00000590260 A8MTW9 85 aa13.2□□□□□ -0.3
DDX39A-212ENST00000590260 IGKV3-20P01619 116 aa13.2□□□□□ -0.3
DDX39A-212ENST00000590260 PRB4P10163 310 aaPredicted RBP13.2□□□□□ -0.3
DDX39A-212ENST00000590260 MEOX2P50222 304 aa13.2□□□□□ -0.3
DDX39A-212ENST00000590260 OPCMLQ14982 345 aa13.2□□□□□ -0.3
DDX39A-212ENST00000590260 PXDC1Q5TGL8 231 aa13.2□□□□□ -0.3
DDX39A-212ENST00000590260 LINC00305Q7Z4B0 112 aa13.2□□□□□ -0.3
DDX39A-212ENST00000590260 C16orf92Q96LL3 132 aa13.2□□□□□ -0.3
DDX39A-212ENST00000590260 ALG5Q9Y673 324 aa13.2□□□□□ -0.3
DDX39A-212ENST00000590260 E5RGE8 158 aa13.19□□□□□ -0.3
DDX39A-212ENST00000590260 SSNA1O43805 119 aa13.19□□□□□ -0.3
DDX39A-212ENST00000590260 SNRPCP09234 159 aaKnown RBP13.19□□□□□ -0.3
DDX39A-212ENST00000590260 CXCL3P19876 107 aa13.19□□□□□ -0.3
DDX39A-212ENST00000590260 FXYD7P58549 80 aa13.19□□□□□ -0.3
DDX39A-212ENST00000590260 FAM78BQ5VT40 261 aa13.19□□□□□ -0.3
DDX39A-212ENST00000590260 AMTNQ6UX39 209 aa13.19□□□□□ -0.3
DDX39A-212ENST00000590260 STX12Q86Y82 276 aa13.19□□□□□ -0.3
DDX39A-212ENST00000590260 CHAC2Q8WUX2 184 aa13.19□□□□□ -0.3
DDX39A-212ENST00000590260 CLUHP3Q96NS8 147 aa13.19□□□□□ -0.3
DDX39A-212ENST00000590260 SLC35B3Q9H1N7 401 aa13.19□□□□□ -0.3
DDX39A-212ENST00000590260 XCL2Q9UBD3 114 aa13.19□□□□□ -0.3
DDX39A-212ENST00000590260 TRAV5A0A0B4J249 113 aa13.18□□□□□ -0.3
DDX39A-212ENST00000590260 IGHV4-28A0A0C4DH34 117 aa13.18□□□□□ -0.3
DDX39A-212ENST00000590260 LCE6AA0A183 80 aa13.18□□□□□ -0.3
DDX39A-212ENST00000590260 MPC2O95563 127 aa13.18□□□□□ -0.3
DDX39A-212ENST00000590260 PTTG1O95997 202 aa13.18□□□□□ -0.3
DDX39A-212ENST00000590260 RPL7P18124 248 aaKnown RBP13.18□□□□□ -0.3
DDX39A-212ENST00000590260 RPL29P47914 159 aaKnown RBP13.18□□□□□ -0.3
DDX39A-212ENST00000590260 CYCSP99999 105 aaKnown RBP13.18□□□□□ -0.3
DDX39A-212ENST00000590260 PMS2P11Q13670 270 aa13.18□□□□□ -0.3
DDX39A-212ENST00000590260 ATP6V1FQ16864 119 aa13.18□□□□□ -0.3
DDX39A-212ENST00000590260 TMEM41BQ5BJD5 291 aa13.18□□□□□ -0.3
DDX39A-212ENST00000590260 OR5C1Q8NGR4 320 aa13.18□□□□□ -0.3
DDX39A-212ENST00000590260 ZNF705DP0CH99 300 aaPredicted RBP13.17□□□□□ -0.3
DDX39A-212ENST00000590260 ZNF705BP0CI00 300 aaPredicted RBP13.17□□□□□ -0.3
DDX39A-212ENST00000590260 FGF7P21781 194 aa13.17□□□□□ -0.3
DDX39A-212ENST00000590260 HBG1P69891 147 aa13.17□□□□□ -0.3
DDX39A-212ENST00000590260 HBG2P69892 147 aa13.17□□□□□ -0.3
DDX39A-212ENST00000590260 BAXQ07812 192 aa13.17□□□□□ -0.3
DDX39A-212ENST00000590260 FGL1Q08830 312 aa13.17□□□□□ -0.3
DDX39A-212ENST00000590260 RPRMQ9NS64 109 aa13.17□□□□□ -0.3
DDX39A-212ENST00000590260 SLC39A9Q9NUM3 307 aa13.17□□□□□ -0.3
DDX39A-212ENST00000590260 ELOA3CA0A087WX78 387 aaPredicted RBP13.16□□□□□ -0.3
DDX39A-212ENST00000590260 H3BTX0 84 aa13.16□□□□□ -0.3
DDX39A-212ENST00000590260 SLC17A3O00476 420 aa13.16□□□□□ -0.3
DDX39A-212ENST00000590260 COX7A2P2O60397 106 aa13.16□□□□□ -0.3
DDX39A-212ENST00000590260 NANOS2P60321 138 aaKnown RBP13.16□□□□□ -0.3
DDX39A-212ENST00000590260 GCSAMLQ5JQS6 135 aa13.16□□□□□ -0.3
DDX39A-212ENST00000590260 SAMD13Q5VXD3 122 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 97.2 ms