RNA–Protein interactions for RNA: ENST00000590188.5

CIRBP-227, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 361 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-227ENST00000590188 SAV1Q9H4B6 383 aaPredicted RBP13.09□□□□□ -0.31
CIRBP-227ENST00000590188 FNDC10F2Z333 226 aa13.08□□□□□ -0.32
CIRBP-227ENST00000590188 ISLRO14498 428 aa13.08□□□□□ -0.32
CIRBP-227ENST00000590188 GOSR2O14653 212 aa13.08□□□□□ -0.32
CIRBP-227ENST00000590188 NUTF2P61970 127 aaKnown RBP13.08□□□□□ -0.32
CIRBP-227ENST00000590188 SELENOTP62341 195 aa13.08□□□□□ -0.32
CIRBP-227ENST00000590188 FOXI2Q6ZQN5 318 aa13.08□□□□□ -0.32
CIRBP-227ENST00000590188 NRARPQ7Z6K4 114 aa13.08□□□□□ -0.32
CIRBP-227ENST00000590188 CSNK1G2-AS1Q8NCQ2 148 aa13.08□□□□□ -0.32
CIRBP-227ENST00000590188 PHLDA1Q8WV24 401 aaPredicted RBP13.08□□□□□ -0.32
CIRBP-227ENST00000590188 SHANK2-AS3Q9BTD1 123 aa13.08□□□□□ -0.32
CIRBP-227ENST00000590188 C11orf1Q9H5F2 150 aa13.08□□□□□ -0.32
CIRBP-227ENST00000590188 X6R8D5 127 aa13.08□□□□□ -0.32
CIRBP-227ENST00000590188 AGPAT2O15120 278 aa13.07□□□□□ -0.32
CIRBP-227ENST00000590188 DEDDO75618 318 aa13.07□□□□□ -0.32
CIRBP-227ENST00000590188 RBMY1A1P0DJD3 496 aaKnown RBP13.07□□□□□ -0.32
CIRBP-227ENST00000590188 RBMY1CP0DJD4 496 aa13.07□□□□□ -0.32
CIRBP-227ENST00000590188 ATF4P18848 351 aaPredicted RBP13.07□□□□□ -0.32
CIRBP-227ENST00000590188 PVALBP20472 110 aaPredicted RBP13.07□□□□□ -0.32
CIRBP-227ENST00000590188 S100A7P31151 101 aa13.07□□□□□ -0.32
CIRBP-227ENST00000590188 MEOX2P50222 304 aa13.07□□□□□ -0.32
CIRBP-227ENST00000590188 RBMY1FQ15415 496 aaKnown RBP13.07□□□□□ -0.32
CIRBP-227ENST00000590188 PATE2Q6UY27 113 aa13.07□□□□□ -0.32
CIRBP-227ENST00000590188 MGST2Q99735 147 aa13.07□□□□□ -0.32
CIRBP-227ENST00000590188 ARV1Q9H2C2 271 aa13.07□□□□□ -0.32
CIRBP-227ENST00000590188 GPN1Q9HCN4 374 aaPredicted RBP13.07□□□□□ -0.32
CIRBP-227ENST00000590188 IGSF23A1L1A6 192 aa13.06□□□□□ -0.32
CIRBP-227ENST00000590188 ZNF705EA8MWA4 302 aaPredicted RBP13.06□□□□□ -0.32
CIRBP-227ENST00000590188 INMT-MINDY4F8WBC2 141 aa13.06□□□□□ -0.32
CIRBP-227ENST00000590188 SNRPCP09234 159 aaKnown RBP13.06□□□□□ -0.32
CIRBP-227ENST00000590188 PRB4P10163 310 aaPredicted RBP13.06□□□□□ -0.32
CIRBP-227ENST00000590188 PLP1P60201 277 aa13.06□□□□□ -0.32
CIRBP-227ENST00000590188 EBLN2Q6P2I7 272 aa13.06□□□□□ -0.32
CIRBP-227ENST00000590188 ZNF546Q86UE3 836 aa13.06□□□□□ -0.32
CIRBP-227ENST00000590188 RNF182Q8N6D2 247 aa13.06□□□□□ -0.32
CIRBP-227ENST00000590188 GPR82Q96P67 336 aa13.06□□□□□ -0.32
CIRBP-227ENST00000590188 GGACTQ9BVM4 153 aa13.06□□□□□ -0.32
CIRBP-227ENST00000590188 SLC35B3Q9H1N7 401 aa13.06□□□□□ -0.32
CIRBP-227ENST00000590188 RPRMQ9NS64 109 aa13.06□□□□□ -0.32
CIRBP-227ENST00000590188 IGHV3OR16-12A0A075B7B8 117 aa13.05□□□□□ -0.32
CIRBP-227ENST00000590188 MIFP14174 115 aa13.05□□□□□ -0.32
CIRBP-227ENST00000590188 IL15RAQ13261 267 aa13.05□□□□□ -0.32
CIRBP-227ENST00000590188 FAM78BQ5VT40 261 aa13.05□□□□□ -0.32
CIRBP-227ENST00000590188 C1QTNF4Q9BXJ3 329 aa13.05□□□□□ -0.32
CIRBP-227ENST00000590188 KLK5Q9Y337 293 aaPredicted RBP13.05□□□□□ -0.32
CIRBP-227ENST00000590188 ELOA3CA0A087WX78 387 aaPredicted RBP13.04□□□□□ -0.32
CIRBP-227ENST00000590188 TRAV8-2A0A0B4J237 113 aa13.04□□□□□ -0.32
CIRBP-227ENST00000590188 A0A0J9YX75 114 aa13.04□□□□□ -0.32
CIRBP-227ENST00000590188 UBE2L5PA0A1B0GUS4 154 aa13.04□□□□□ -0.32
CIRBP-227ENST00000590188 COX7A2P2O60397 106 aa13.04□□□□□ -0.32
CIRBP-227ENST00000590188 ZNF705DP0CH99 300 aaPredicted RBP13.04□□□□□ -0.32
CIRBP-227ENST00000590188 ZNF705BP0CI00 300 aaPredicted RBP13.04□□□□□ -0.32
CIRBP-227ENST00000590188 RPL7P18124 248 aaKnown RBP13.04□□□□□ -0.32
CIRBP-227ENST00000590188 HLA-DMBP28068 263 aa13.04□□□□□ -0.32
CIRBP-227ENST00000590188 LRRC37A5PQ49AS3 106 aa13.04□□□□□ -0.32
CIRBP-227ENST00000590188 SAMD13Q5VXD3 122 aa13.04□□□□□ -0.32
CIRBP-227ENST00000590188 TMEM252Q8N6L7 170 aa13.04□□□□□ -0.32
CIRBP-227ENST00000590188 MFFQ9GZY8 342 aa13.04□□□□□ -0.32
CIRBP-227ENST00000590188 LYRM2Q9NU23 88 aaPredicted RBP13.04□□□□□ -0.32
CIRBP-227ENST00000590188 UQCC1Q9NVA1 299 aa13.04□□□□□ -0.32
CIRBP-227ENST00000590188 LY6G6CO95867 125 aa13.03□□□□□ -0.32
CIRBP-227ENST00000590188 CAMLGP49069 296 aa13.03□□□□□ -0.32
CIRBP-227ENST00000590188 SULT1A1P50225 295 aa13.03□□□□□ -0.32
CIRBP-227ENST00000590188 BAXQ07812 192 aa13.03□□□□□ -0.32
CIRBP-227ENST00000590188 MIC13Q5XKP0 118 aa13.03□□□□□ -0.32
CIRBP-227ENST00000590188 LINC00305Q7Z4B0 112 aa13.03□□□□□ -0.32
CIRBP-227ENST00000590188 STX12Q86Y82 276 aa13.03□□□□□ -0.32
CIRBP-227ENST00000590188 ZNF709Q8N972 641 aa13.03□□□□□ -0.32
CIRBP-227ENST00000590188 BATF3Q9NR55 127 aa13.03□□□□□ -0.32
CIRBP-227ENST00000590188 DEFA1P59665 94 aa13.02□□□□□ -0.33
CIRBP-227ENST00000590188 DEFA3P59666 94 aa13.02□□□□□ -0.33
CIRBP-227ENST00000590188 PSG9Q00887 426 aa13.02□□□□□ -0.33
CIRBP-227ENST00000590188 MORN5Q5VZ52 161 aa13.02□□□□□ -0.33
CIRBP-227ENST00000590188 ZNF767PQ75MW2 155 aa13.02□□□□□ -0.33
CIRBP-227ENST00000590188 ZNF738Q8NE65 137 aa13.02□□□□□ -0.33
CIRBP-227ENST00000590188 LRRC20Q8TCA0 184 aa13.02□□□□□ -0.33
CIRBP-227ENST00000590188 LINC00476Q8WZB0 136 aa13.02□□□□□ -0.33
CIRBP-227ENST00000590188 CELA1Q9UNI1 258 aa13.02□□□□□ -0.33
CIRBP-227ENST00000590188 H3BTX0 84 aa13.01□□□□□ -0.33
CIRBP-227ENST00000590188 PRAF2O60831 178 aa13.01□□□□□ -0.33
CIRBP-227ENST00000590188 S100A7AQ86SG5 101 aa13.01□□□□□ -0.33
CIRBP-227ENST00000590188 TMEM37Q8WXS4 190 aa13.01□□□□□ -0.33
CIRBP-227ENST00000590188 OR5AC2Q9NZP5 309 aa13.01□□□□□ -0.33
CIRBP-227ENST00000590188 WDR83OSQ9Y284 106 aa13.01□□□□□ -0.33
CIRBP-227ENST00000590188 S100A11P31949 105 aa13□□□□□ -0.33
CIRBP-227ENST00000590188 EMP1P54849 157 aa13□□□□□ -0.33
CIRBP-227ENST00000590188 RAB31Q13636 194 aa13□□□□□ -0.33
CIRBP-227ENST00000590188 PXDC1Q5TGL8 231 aa13□□□□□ -0.33
CIRBP-227ENST00000590188 C10orf113Q5VZT2 155 aa13□□□□□ -0.33
CIRBP-227ENST00000590188 SPATA31B1PQ5VZV4 182 aa13□□□□□ -0.33
CIRBP-227ENST00000590188 A0A087X0K7 114 aa12.99□□□□□ -0.33
CIRBP-227ENST00000590188 MRPS12O15235 138 aaKnown RBP12.99□□□□□ -0.33
CIRBP-227ENST00000590188 SSNA1O43805 119 aa12.99□□□□□ -0.33
CIRBP-227ENST00000590188 FGF7P21781 194 aa12.99□□□□□ -0.33
CIRBP-227ENST00000590188 CNN1P51911 297 aaKnown RBP12.99□□□□□ -0.33
CIRBP-227ENST00000590188 HBG1P69891 147 aa12.99□□□□□ -0.33
CIRBP-227ENST00000590188 HBG2P69892 147 aa12.99□□□□□ -0.33
CIRBP-227ENST00000590188 NHLH2Q02577 135 aa12.99□□□□□ -0.33
CIRBP-227ENST00000590188 OPCMLQ14982 345 aa12.99□□□□□ -0.33
CIRBP-227ENST00000590188 VWC2Q2TAL6 325 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms