RNA–Protein interactions for RNA: ENST00000589940.5

CXXC1-212, Transcript of CXXC finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene CXXC1, Length 2,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-212ENST00000589940 FAM106AQ4KMX7 169 aa13.37□□□□□ -0.27
CXXC1-212ENST00000589940 C18orf65Q6ZTR6 163 aa13.37□□□□□ -0.27
CXXC1-212ENST00000589940 BPIFA4PQ86YQ2 179 aa13.37□□□□□ -0.27
CXXC1-212ENST00000589940 ARL2-SNX15V9GYD0 113 aa13.37□□□□□ -0.27
CXXC1-212ENST00000589940 IGHV4OR15-8A0A075B7B6 117 aa13.36□□□□□ -0.27
CXXC1-212ENST00000589940 A0A087WW49 117 aa13.36□□□□□ -0.27
CXXC1-212ENST00000589940 ZNF320A2RRD8 509 aa13.36□□□□□ -0.27
CXXC1-212ENST00000589940 ZNF207O43670 478 aaKnown RBP13.36□□□□□ -0.27
CXXC1-212ENST00000589940 TMEM218A2RU14 115 aa13.35□□□□□ -0.27
CXXC1-212ENST00000589940 FAM74A7A6NL05 159 aa13.35□□□□□ -0.27
CXXC1-212ENST00000589940 BUB3O43684 328 aa13.35□□□□□ -0.27
CXXC1-212ENST00000589940 CST9LP1Q5W188 147 aa13.35□□□□□ -0.27
CXXC1-212ENST00000589940 C11orf44Q8N8P7 122 aa13.35□□□□□ -0.27
CXXC1-212ENST00000589940 KLHL30-AS1Q8NEE0 82 aa13.35□□□□□ -0.27
CXXC1-212ENST00000589940 YTHDF2Q9Y5A9 579 aaKnown RBP13.35□□□□□ -0.27
CXXC1-212ENST00000589940 U3KQE9 123 aa13.35□□□□□ -0.27
CXXC1-212ENST00000589940 C11orf94C9JXX5 98 aa13.35□□□□□ -0.27
CXXC1-212ENST00000589940 CD81P60033 236 aa13.35□□□□□ -0.27
CXXC1-212ENST00000589940 TXNDC17Q9BRA2 123 aa13.35□□□□□ -0.27
CXXC1-212ENST00000589940 SLC35B3Q9H1N7 401 aa13.35□□□□□ -0.27
CXXC1-212ENST00000589940 A0A1B0GUS0 222 aa13.34□□□□□ -0.27
CXXC1-212ENST00000589940 KRBOX1C9JBD0 128 aa13.34□□□□□ -0.27
CXXC1-212ENST00000589940 MRPS12O15235 138 aaKnown RBP13.34□□□□□ -0.27
CXXC1-212ENST00000589940 NBEAP1P0C6P0 100 aa13.34□□□□□ -0.27
CXXC1-212ENST00000589940 SFTA3P0C7M3 94 aa13.34□□□□□ -0.27
CXXC1-212ENST00000589940 HIST1H1EP10412 219 aaKnown RBP13.34□□□□□ -0.27
CXXC1-212ENST00000589940 RPL7P18124 248 aaKnown RBP13.34□□□□□ -0.27
CXXC1-212ENST00000589940 DEFB136Q30KP8 78 aa13.34□□□□□ -0.27
CXXC1-212ENST00000589940 C1orf194Q5T5A4 169 aa13.34□□□□□ -0.27
CXXC1-212ENST00000589940 OR8I2Q8N0Y5 310 aa13.34□□□□□ -0.27
CXXC1-212ENST00000589940 OR4F17Q8NGA8 305 aa13.34□□□□□ -0.27
CXXC1-212ENST00000589940 OR4F4Q96R69 305 aa13.34□□□□□ -0.27
CXXC1-212ENST00000589940 DAZ1Q9NQZ3 744 aaKnown RBP13.34□□□□□ -0.27
CXXC1-212ENST00000589940 TSSC4Q9Y5U2 329 aaPredicted RBP13.34□□□□□ -0.27
CXXC1-212ENST00000589940 A0A1W2PRE2 83 aa13.33□□□□□ -0.27
CXXC1-212ENST00000589940 APOHP02749 345 aaPredicted RBP13.33□□□□□ -0.27
CXXC1-212ENST00000589940 SRP19P09132 144 aaKnown RBP13.33□□□□□ -0.27
CXXC1-212ENST00000589940 IGLC2P0DOY2 106 aa13.33□□□□□ -0.27
CXXC1-212ENST00000589940 ZP3P21754 424 aa13.33□□□□□ -0.27
CXXC1-212ENST00000589940 HOXD3P31249 432 aaPredicted RBP13.33□□□□□ -0.27
CXXC1-212ENST00000589940 HIST2H2BDQ6DRA6 164 aa13.33□□□□□ -0.27
CXXC1-212ENST00000589940 LINC00052Q96N35 136 aa13.33□□□□□ -0.27
CXXC1-212ENST00000589940 CITED2Q99967 270 aaPredicted RBP13.33□□□□□ -0.27
CXXC1-212ENST00000589940 K7EMT4 169 aa13.33□□□□□ -0.28
CXXC1-212ENST00000589940 SNRPCP09234 159 aaKnown RBP13.33□□□□□ -0.28
CXXC1-212ENST00000589940 ATP5G3P48201 142 aa13.33□□□□□ -0.28
CXXC1-212ENST00000589940 BLNKQ8WV28 456 aa13.33□□□□□ -0.28
CXXC1-212ENST00000589940 UFC1Q9Y3C8 167 aa13.33□□□□□ -0.28
CXXC1-212ENST00000589940 IGHV3OR16-13A0A075B7E8 117 aa13.32□□□□□ -0.28
CXXC1-212ENST00000589940 IGHV3-74A0A0B4J1X5 117 aa13.32□□□□□ -0.28
CXXC1-212ENST00000589940 LOC105371267A0A1B0GV96 52 aa13.32□□□□□ -0.28
CXXC1-212ENST00000589940 LINC01619G3V211 115 aa13.32□□□□□ -0.28
CXXC1-212ENST00000589940 H3BQ15 152 aa13.32□□□□□ -0.28
CXXC1-212ENST00000589940 NDUFS6O75380 124 aaKnown RBP13.32□□□□□ -0.28
CXXC1-212ENST00000589940 REC114Q7Z4M0 266 aa13.32□□□□□ -0.28
CXXC1-212ENST00000589940 OR11H1Q8NG94 326 aa13.32□□□□□ -0.28
CXXC1-212ENST00000589940 GPR82Q96P67 336 aa13.32□□□□□ -0.28
CXXC1-212ENST00000589940 ZNF586Q9NXT0 402 aa13.32□□□□□ -0.28
CXXC1-212ENST00000589940 PRELID1Q9Y255 219 aa13.32□□□□□ -0.28
CXXC1-212ENST00000589940 IGHV3-49A0A0A0MS15 119 aa13.32□□□□□ -0.28
CXXC1-212ENST00000589940 IGHV3-66A0A0C4DH42 116 aa13.32□□□□□ -0.28
CXXC1-212ENST00000589940 TM4SF20Q53R12 229 aa13.32□□□□□ -0.28
CXXC1-212ENST00000589940 C8orf86Q6ZUL3 223 aa13.32□□□□□ -0.28
CXXC1-212ENST00000589940 CYB561D1Q8N8Q1 229 aa13.32□□□□□ -0.28
CXXC1-212ENST00000589940 OR1N2Q8NGR9 330 aa13.32□□□□□ -0.28
CXXC1-212ENST00000589940 LGALS9O00182 355 aa13.31□□□□□ -0.28
CXXC1-212ENST00000589940 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.31□□□□□ -0.28
CXXC1-212ENST00000589940 DPF1Q92782 380 aa13.31□□□□□ -0.28
CXXC1-212ENST00000589940 NKX6-2Q9C056 277 aaPredicted RBP13.31□□□□□ -0.28
CXXC1-212ENST00000589940 A8MWP6 167 aa13.31□□□□□ -0.28
CXXC1-212ENST00000589940 GGTLC3B5MD39 225 aa13.31□□□□□ -0.28
CXXC1-212ENST00000589940 TMEM250H0YL14 139 aa13.31□□□□□ -0.28
CXXC1-212ENST00000589940 PDE6DO43924 150 aa13.31□□□□□ -0.28
CXXC1-212ENST00000589940 ADCYAP1P18509 176 aa13.31□□□□□ -0.28
CXXC1-212ENST00000589940 SYNJ2BPP57105 145 aa13.31□□□□□ -0.28
CXXC1-212ENST00000589940 KLF5Q13887 457 aaPredicted RBP13.31□□□□□ -0.28
CXXC1-212ENST00000589940 C1QL4Q86Z23 238 aa13.31□□□□□ -0.28
CXXC1-212ENST00000589940 TRBV19A0A075B6N1 114 aa13.3□□□□□ -0.28
CXXC1-212ENST00000589940 IGHV7-4-1A0A0J9YVY3 117 aa13.3□□□□□ -0.28
CXXC1-212ENST00000589940 A0A1W2PRX2 142 aa13.3□□□□□ -0.28
CXXC1-212ENST00000589940 A0A1W2PS18 150 aa13.3□□□□□ -0.28
CXXC1-212ENST00000589940 F8W036 122 aa13.3□□□□□ -0.28
CXXC1-212ENST00000589940 H3BTX0 84 aa13.3□□□□□ -0.28
CXXC1-212ENST00000589940 RANP62826 216 aaKnown RBP13.3□□□□□ -0.28
CXXC1-212ENST00000589940 C16orf54Q6UWD8 224 aa13.3□□□□□ -0.28
CXXC1-212ENST00000589940 CCDC28AQ8IWP9 274 aa13.3□□□□□ -0.28
CXXC1-212ENST00000589940 GALR1P47211 349 aa13.29□□□□□ -0.28
CXXC1-212ENST00000589940 CEBPGP53567 150 aa13.29□□□□□ -0.28
CXXC1-212ENST00000589940 GRAMD2BQ96HH9 432 aa13.29□□□□□ -0.28
CXXC1-212ENST00000589940 SEC11CQ9BY50 192 aa13.29□□□□□ -0.28
CXXC1-212ENST00000589940 F6UZH7 168 aa13.29□□□□□ -0.28
CXXC1-212ENST00000589940 SLURP1P55000 103 aa13.29□□□□□ -0.28
CXXC1-212ENST00000589940 SUMO1P63165 101 aaKnown RBP13.29□□□□□ -0.28
CXXC1-212ENST00000589940 FOXL1Q12952 345 aa13.29□□□□□ -0.28
CXXC1-212ENST00000589940 PDE6HQ13956 83 aa13.29□□□□□ -0.28
CXXC1-212ENST00000589940 SOHLH1Q5JUK2 328 aa13.29□□□□□ -0.28
CXXC1-212ENST00000589940 DUX3Q96PT4 197 aa13.29□□□□□ -0.28
CXXC1-212ENST00000589940 SMAD5-AS1Q9Y6J3 95 aa13.29□□□□□ -0.28
CXXC1-212ENST00000589940 TMEM213A2RRL7 107 aa13.28□□□□□ -0.28
CXXC1-212ENST00000589940 ATF4P18848 351 aaPredicted RBP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms