RNA–Protein interactions for RNA: ENST00000589417.1

H3F3B-207, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-207ENST00000589417 PPP1R1CQ8WVI7 109 aa12.86□□□□□ -0.35
H3F3B-207ENST00000589417 CLUHP3Q96NS8 147 aa12.86□□□□□ -0.35
H3F3B-207ENST00000589417 SLC25A31Q9H0C2 315 aa12.86□□□□□ -0.35
H3F3B-207ENST00000589417 ELOA3CA0A087WX78 387 aaPredicted RBP12.85□□□□□ -0.35
H3F3B-207ENST00000589417 KNCNA6PVL3 124 aa12.85□□□□□ -0.35
H3F3B-207ENST00000589417 H3BMM0 161 aa12.85□□□□□ -0.35
H3F3B-207ENST00000589417 RPL7P18124 248 aaKnown RBP12.85□□□□□ -0.35
H3F3B-207ENST00000589417 CAMLGP49069 296 aa12.85□□□□□ -0.35
H3F3B-207ENST00000589417 ACTL10Q5JWF8 245 aa12.85□□□□□ -0.35
H3F3B-207ENST00000589417 RNF126Q9BV68 326 aa12.85□□□□□ -0.35
H3F3B-207ENST00000589417 SCRT1Q9BWW7 348 aa12.85□□□□□ -0.35
H3F3B-207ENST00000589417 ARL6Q9H0F7 186 aa12.85□□□□□ -0.35
H3F3B-207ENST00000589417 ARV1Q9H2C2 271 aa12.85□□□□□ -0.35
H3F3B-207ENST00000589417 SLC25A22Q9H936 323 aa12.85□□□□□ -0.35
H3F3B-207ENST00000589417 OR5AC2Q9NZP5 309 aa12.85□□□□□ -0.35
H3F3B-207ENST00000589417 MPDU1O75352 247 aa12.84□□□□□ -0.35
H3F3B-207ENST00000589417 OR5G3P0C626 314 aa12.84□□□□□ -0.35
H3F3B-207ENST00000589417 HLA-DRB4P13762 266 aa12.84□□□□□ -0.35
H3F3B-207ENST00000589417 RPL29P47914 159 aaKnown RBP12.84□□□□□ -0.35
H3F3B-207ENST00000589417 BAXQ07812 192 aa12.84□□□□□ -0.35
H3F3B-207ENST00000589417 SPATA31B1PQ5VZV4 182 aa12.84□□□□□ -0.35
H3F3B-207ENST00000589417 RSG1Q9BU20 258 aa12.84□□□□□ -0.35
H3F3B-207ENST00000589417 DOK5Q9P104 306 aa12.84□□□□□ -0.35
H3F3B-207ENST00000589417 HLA-DRB4X5D2U9 266 aa12.84□□□□□ -0.35
H3F3B-207ENST00000589417 A0A087X0K7 114 aa12.83□□□□□ -0.36
H3F3B-207ENST00000589417 MRPS12O15235 138 aaKnown RBP12.83□□□□□ -0.36
H3F3B-207ENST00000589417 MPC2O95563 127 aa12.83□□□□□ -0.36
H3F3B-207ENST00000589417 CA1P00915 261 aaPredicted RBP12.83□□□□□ -0.36
H3F3B-207ENST00000589417 EWSR1Q01844 656 aaKnown RBP eCLIP12.83□□□□□ -0.36
H3F3B-207ENST00000589417 NHLH2Q02577 135 aa12.83□□□□□ -0.36
H3F3B-207ENST00000589417 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.83□□□□□ -0.36
H3F3B-207ENST00000589417 FOXI2Q6ZQN5 318 aa12.83□□□□□ -0.36
H3F3B-207ENST00000589417 TMEM37Q8WXS4 190 aa12.83□□□□□ -0.36
H3F3B-207ENST00000589417 UHRF2Q96PU4 802 aa12.83□□□□□ -0.36
H3F3B-207ENST00000589417 SAV1Q9H4B6 383 aaPredicted RBP12.83□□□□□ -0.36
H3F3B-207ENST00000589417 ALG5Q9Y673 324 aa12.83□□□□□ -0.36
H3F3B-207ENST00000589417 CSMD3Q7Z407 3707 aa12.82□□□□□ -0.36
H3F3B-207ENST00000589417 PET100P0DJ07 73 aa12.82□□□□□ -0.36
H3F3B-207ENST00000589417 OPCMLQ14982 345 aa12.82□□□□□ -0.36
H3F3B-207ENST00000589417 LRRC37A5PQ49AS3 106 aa12.82□□□□□ -0.36
H3F3B-207ENST00000589417 Q6ZRG5 221 aa12.82□□□□□ -0.36
H3F3B-207ENST00000589417 CSNK1G2-AS1Q8NCQ2 148 aa12.82□□□□□ -0.36
H3F3B-207ENST00000589417 DNAJC4Q9NNZ3 241 aa12.82□□□□□ -0.36
H3F3B-207ENST00000589417 STARD9Q9P2P6 4700 aa12.81□□□□□ -0.36
H3F3B-207ENST00000589417 NUTF2P61970 127 aaKnown RBP12.81□□□□□ -0.36
H3F3B-207ENST00000589417 LINC00305Q7Z4B0 112 aa12.81□□□□□ -0.36
H3F3B-207ENST00000589417 OR5C1Q8NGR4 320 aa12.81□□□□□ -0.36
H3F3B-207ENST00000589417 C16orf92Q96LL3 132 aa12.81□□□□□ -0.36
H3F3B-207ENST00000589417 LINC00052Q96N35 136 aa12.81□□□□□ -0.36
H3F3B-207ENST00000589417 RARRES2Q99969 163 aa12.81□□□□□ -0.36
H3F3B-207ENST00000589417 UBE2L5PA0A1B0GUS4 154 aa12.8□□□□□ -0.36
H3F3B-207ENST00000589417 A8MTW9 85 aa12.8□□□□□ -0.36
H3F3B-207ENST00000589417 C4BPBP20851 252 aa12.8□□□□□ -0.36
H3F3B-207ENST00000589417 MIC13Q5XKP0 118 aa12.8□□□□□ -0.36
H3F3B-207ENST00000589417 RPRMQ9NS64 109 aa12.8□□□□□ -0.36
H3F3B-207ENST00000589417 SLC39A9Q9NUM3 307 aa12.8□□□□□ -0.36
H3F3B-207ENST00000589417 TRAV8-2A0A0B4J237 113 aa12.79□□□□□ -0.36
H3F3B-207ENST00000589417 A0A0J9YWU9 116 aa12.79□□□□□ -0.36
H3F3B-207ENST00000589417 ZNF705EA8MWA4 302 aaPredicted RBP12.79□□□□□ -0.36
H3F3B-207ENST00000589417 COX7A2P2O60397 106 aa12.79□□□□□ -0.36
H3F3B-207ENST00000589417 CXCL2P19875 107 aa12.79□□□□□ -0.36
H3F3B-207ENST00000589417 CXCL3P19876 107 aa12.79□□□□□ -0.36
H3F3B-207ENST00000589417 GDF5OSQ5U4N7 250 aa12.79□□□□□ -0.36
H3F3B-207ENST00000589417 C10orf113Q5VZT2 155 aa12.79□□□□□ -0.36
H3F3B-207ENST00000589417 OR1L4Q8NGR5 311 aa12.79□□□□□ -0.36
H3F3B-207ENST00000589417 OR11H2Q8NH07 326 aa12.79□□□□□ -0.36
H3F3B-207ENST00000589417 C20orf173Q96LM9 149 aa12.79□□□□□ -0.36
H3F3B-207ENST00000589417 PFDN5Q99471 154 aa12.79□□□□□ -0.36
H3F3B-207ENST00000589417 C1QTNF4Q9BXJ3 329 aa12.79□□□□□ -0.36
H3F3B-207ENST00000589417 C11orf68Q9H3H3 251 aaKnown RBP12.79□□□□□ -0.36
H3F3B-207ENST00000589417 AGRNO00468 2067 aa12.78□□□□□ -0.36
H3F3B-207ENST00000589417 A0A0J9YX75 114 aa12.78□□□□□ -0.36
H3F3B-207ENST00000589417 FGF7P21781 194 aa12.78□□□□□ -0.36
H3F3B-207ENST00000589417 B2MP61769 119 aa12.78□□□□□ -0.36
H3F3B-207ENST00000589417 BPIFA4PQ86YQ2 179 aa12.78□□□□□ -0.36
H3F3B-207ENST00000589417 NPCDR1Q9BY65 106 aa12.78□□□□□ -0.36
H3F3B-207ENST00000589417 EBLN2Q6P2I7 272 aa12.77□□□□□ -0.37
H3F3B-207ENST00000589417 ASB13Q8WXK3 278 aa12.77□□□□□ -0.37
H3F3B-207ENST00000589417 HSPB11Q9Y547 144 aa12.77□□□□□ -0.37
H3F3B-207ENST00000589417 PXMP4Q9Y6I8 212 aa12.77□□□□□ -0.37
H3F3B-207ENST00000589417 IGLC2P0DOY2 106 aa12.76□□□□□ -0.37
H3F3B-207ENST00000589417 RPL12P30050 165 aaKnown RBP12.76□□□□□ -0.37
H3F3B-207ENST00000589417 DEFB1P60022 68 aa12.76□□□□□ -0.37
H3F3B-207ENST00000589417 RGS21Q2M5E4 152 aa12.76□□□□□ -0.37
H3F3B-207ENST00000589417 MORN5Q5VZ52 161 aa12.76□□□□□ -0.37
H3F3B-207ENST00000589417 OR11H7Q8NGC8 314 aa12.76□□□□□ -0.37
H3F3B-207ENST00000589417 WDR61Q9GZS3 305 aaKnown RBP12.76□□□□□ -0.37
H3F3B-207ENST00000589417 MED28Q9H204 178 aa12.76□□□□□ -0.37
H3F3B-207ENST00000589417 HRH4Q9H3N8 390 aa12.76□□□□□ -0.37
H3F3B-207ENST00000589417 CLINT1Q14677 625 aa12.75□□□□□ -0.37
H3F3B-207ENST00000589417 OXA1LQ15070 435 aa12.75□□□□□ -0.37
H3F3B-207ENST00000589417 FCN2Q15485 313 aa12.75□□□□□ -0.37
H3F3B-207ENST00000589417 FAM78BQ5VT40 261 aa12.75□□□□□ -0.37
H3F3B-207ENST00000589417 ZFAND6Q6FIF0 208 aa12.75□□□□□ -0.37
H3F3B-207ENST00000589417 LCN15Q6UWW0 184 aa12.75□□□□□ -0.37
H3F3B-207ENST00000589417 ZNF709Q8N972 641 aa12.75□□□□□ -0.37
H3F3B-207ENST00000589417 ATP5SQ99766 215 aa12.75□□□□□ -0.37
H3F3B-207ENST00000589417 ZNF331Q9NQX6 463 aaPredicted RBP12.75□□□□□ -0.37
H3F3B-207ENST00000589417 MBD2Q9UBB5 411 aa12.75□□□□□ -0.37
H3F3B-207ENST00000589417 X6R8D5 127 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms