RNA–Protein interactions for RNA: ENST00000588857.5

ATG4D-209, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-209ENST00000588857 VAX2Q9UIW0 290 aa17.08■□□□□ 0.32
ATG4D-209ENST00000588857 ZNF207O43670 478 aaKnown RBP17.07■□□□□ 0.32
ATG4D-209ENST00000588857 PAGE4O60829 102 aa17.07■□□□□ 0.32
ATG4D-209ENST00000588857 CD5P06127 495 aa17.07■□□□□ 0.32
ATG4D-209ENST00000588857 UBE2G2P60604 165 aa17.07■□□□□ 0.32
ATG4D-209ENST00000588857 BPIFA4PQ86YQ2 179 aa17.07■□□□□ 0.32
ATG4D-209ENST00000588857 TMEM190Q8WZ59 177 aa17.07■□□□□ 0.32
ATG4D-209ENST00000588857 TMEM14CQ9P0S9 112 aa17.07■□□□□ 0.32
ATG4D-209ENST00000588857 IGHV4OR15-8A0A075B7B6 117 aa17.06■□□□□ 0.32
ATG4D-209ENST00000588857 A0A087WW49 117 aa17.06■□□□□ 0.32
ATG4D-209ENST00000588857 A0A1B0GUS0 222 aa17.06■□□□□ 0.32
ATG4D-209ENST00000588857 C18orf65Q6ZTR6 163 aa17.06■□□□□ 0.32
ATG4D-209ENST00000588857 RXFP4Q8TDU9 374 aa17.06■□□□□ 0.32
ATG4D-209ENST00000588857 SMDT1Q9H4I9 107 aa17.06■□□□□ 0.32
ATG4D-209ENST00000588857 GP9P14770 177 aa17.06■□□□□ 0.32
ATG4D-209ENST00000588857 ZP3P21754 424 aa17.06■□□□□ 0.32
ATG4D-209ENST00000588857 CRYBB3P26998 211 aa17.06■□□□□ 0.32
ATG4D-209ENST00000588857 ICAM4Q14773 271 aa17.06■□□□□ 0.32
ATG4D-209ENST00000588857 OR8I2Q8N0Y5 310 aa17.06■□□□□ 0.32
ATG4D-209ENST00000588857 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP17.06■□□□□ 0.32
ATG4D-209ENST00000588857 SUN5Q8TC36 379 aa17.06■□□□□ 0.32
ATG4D-209ENST00000588857 FXYD5Q96DB9 178 aa17.06■□□□□ 0.32
ATG4D-209ENST00000588857 TSSC4Q9Y5U2 329 aaPredicted RBP17.06■□□□□ 0.32
ATG4D-209ENST00000588857 CST9LP1Q5W188 147 aa17.05■□□□□ 0.32
ATG4D-209ENST00000588857 DPF1Q92782 380 aa17.05■□□□□ 0.32
ATG4D-209ENST00000588857 CITED2Q99967 270 aaPredicted RBP17.05■□□□□ 0.32
ATG4D-209ENST00000588857 RPL7P18124 248 aaKnown RBP17.04■□□□□ 0.32
ATG4D-209ENST00000588857 MEF2BQ02080 365 aaPredicted RBP17.04■□□□□ 0.32
ATG4D-209ENST00000588857 DEFB136Q30KP8 78 aa17.04■□□□□ 0.32
ATG4D-209ENST00000588857 OR4F17Q8NGA8 305 aa17.04■□□□□ 0.32
ATG4D-209ENST00000588857 OR1N2Q8NGR9 330 aa17.04■□□□□ 0.32
ATG4D-209ENST00000588857 OR4F4Q96R69 305 aa17.04■□□□□ 0.32
ATG4D-209ENST00000588857 DAZ1Q9NQZ3 744 aaKnown RBP17.04■□□□□ 0.32
ATG4D-209ENST00000588857 UFC1Q9Y3C8 167 aa17.04■□□□□ 0.32
ATG4D-209ENST00000588857 LINC01619G3V211 115 aa17.03■□□□□ 0.32
ATG4D-209ENST00000588857 BUB3O43684 328 aa17.03■□□□□ 0.32
ATG4D-209ENST00000588857 HOXD3P31249 432 aaPredicted RBP17.03■□□□□ 0.32
ATG4D-209ENST00000588857 C1orf194Q5T5A4 169 aa17.03■□□□□ 0.32
ATG4D-209ENST00000588857 OR11H1Q8NG94 326 aa17.03■□□□□ 0.32
ATG4D-209ENST00000588857 ARL2-SNX15V9GYD0 113 aa17.03■□□□□ 0.32
ATG4D-209ENST00000588857 A0A1W2PRX2 142 aa17.02■□□□□ 0.32
ATG4D-209ENST00000588857 NBEAP1P0C6P0 100 aa17.02■□□□□ 0.32
ATG4D-209ENST00000588857 HIST1H1EP10412 219 aaKnown RBP17.02■□□□□ 0.32
ATG4D-209ENST00000588857 HIST2H2BDQ6DRA6 164 aa17.02■□□□□ 0.32
ATG4D-209ENST00000588857 BLNKQ8WV28 456 aa17.02■□□□□ 0.32
ATG4D-209ENST00000588857 YTHDF2Q9Y5A9 579 aaKnown RBP17.02■□□□□ 0.32
ATG4D-209ENST00000588857 U3KQE9 123 aa17.02■□□□□ 0.32
ATG4D-209ENST00000588857 IGHV3OR16-13A0A075B7E8 117 aa17.02■□□□□ 0.31
ATG4D-209ENST00000588857 IGHV3-49A0A0A0MS15 119 aa17.02■□□□□ 0.31
ATG4D-209ENST00000588857 IGHV3-74A0A0B4J1X5 117 aa17.02■□□□□ 0.31
ATG4D-209ENST00000588857 IGHV3-66A0A0C4DH42 116 aa17.02■□□□□ 0.31
ATG4D-209ENST00000588857 FAM74A7A6NL05 159 aa17.02■□□□□ 0.31
ATG4D-209ENST00000588857 C9JQL5 133 aa17.02■□□□□ 0.31
ATG4D-209ENST00000588857 C11orf94C9JXX5 98 aa17.02■□□□□ 0.31
ATG4D-209ENST00000588857 K7EMT4 169 aa17.02■□□□□ 0.31
ATG4D-209ENST00000588857 APOHP02749 345 aaPredicted RBP17.02■□□□□ 0.31
ATG4D-209ENST00000588857 SNRPCP09234 159 aaKnown RBP17.02■□□□□ 0.31
ATG4D-209ENST00000588857 S100A1P23297 94 aa17.02■□□□□ 0.31
ATG4D-209ENST00000588857 FOXL1Q12952 345 aa17.02■□□□□ 0.31
ATG4D-209ENST00000588857 C8orf86Q6ZUL3 223 aa17.02■□□□□ 0.31
ATG4D-209ENST00000588857 GPR82Q96P67 336 aa17.02■□□□□ 0.31
ATG4D-209ENST00000588857 TXNDC17Q9BRA2 123 aa17.02■□□□□ 0.31
ATG4D-209ENST00000588857 A0A1W2PS18 150 aa17.01■□□□□ 0.31
ATG4D-209ENST00000588857 TMEM218A2RU14 115 aa17.01■□□□□ 0.31
ATG4D-209ENST00000588857 SYNJ2BPP57105 145 aa17.01■□□□□ 0.31
ATG4D-209ENST00000588857 TM4SF20Q53R12 229 aa17.01■□□□□ 0.31
ATG4D-209ENST00000588857 C1QL4Q86Z23 238 aa17.01■□□□□ 0.31
ATG4D-209ENST00000588857 GRAMD2BQ96HH9 432 aa17.01■□□□□ 0.31
ATG4D-209ENST00000588857 SLC35B3Q9H1N7 401 aa17.01■□□□□ 0.31
ATG4D-209ENST00000588857 A0A1W2PRE2 83 aa17■□□□□ 0.31
ATG4D-209ENST00000588857 LGALS9O00182 355 aa17■□□□□ 0.31
ATG4D-209ENST00000588857 SFTA3P0C7M3 94 aa17■□□□□ 0.31
ATG4D-209ENST00000588857 REC114Q7Z4M0 266 aa17■□□□□ 0.31
ATG4D-209ENST00000588857 KRBOX1C9JBD0 128 aa16.99■□□□□ 0.31
ATG4D-209ENST00000588857 H3BQ15 152 aa16.99■□□□□ 0.31
ATG4D-209ENST00000588857 MRPS12O15235 138 aaKnown RBP16.99■□□□□ 0.31
ATG4D-209ENST00000588857 SRP19P09132 144 aaKnown RBP16.99■□□□□ 0.31
ATG4D-209ENST00000588857 IGLC2P0DOY2 106 aa16.99■□□□□ 0.31
ATG4D-209ENST00000588857 CD81P60033 236 aa16.99■□□□□ 0.31
ATG4D-209ENST00000588857 KLF5Q13887 457 aaPredicted RBP16.99■□□□□ 0.31
ATG4D-209ENST00000588857 NKX6-2Q9C056 277 aaPredicted RBP16.99■□□□□ 0.31
ATG4D-209ENST00000588857 ZNF586Q9NXT0 402 aa16.99■□□□□ 0.31
ATG4D-209ENST00000588857 IGHV7-4-1A0A0J9YVY3 117 aa16.98■□□□□ 0.31
ATG4D-209ENST00000588857 ATF4P18848 351 aaPredicted RBP16.98■□□□□ 0.31
ATG4D-209ENST00000588857 GALR1P47211 349 aa16.98■□□□□ 0.31
ATG4D-209ENST00000588857 ATP5G3P48201 142 aa16.98■□□□□ 0.31
ATG4D-209ENST00000588857 SLURP1P55000 103 aa16.98■□□□□ 0.31
ATG4D-209ENST00000588857 DUX3Q96PT4 197 aa16.98■□□□□ 0.31
ATG4D-209ENST00000588857 A8MWP6 167 aa16.98■□□□□ 0.31
ATG4D-209ENST00000588857 H3BTX0 84 aa16.98■□□□□ 0.31
ATG4D-209ENST00000588857 PDE6DO43924 150 aa16.98■□□□□ 0.31
ATG4D-209ENST00000588857 CEBPGP53567 150 aa16.98■□□□□ 0.31
ATG4D-209ENST00000588857 RANP62826 216 aaKnown RBP16.98■□□□□ 0.31
ATG4D-209ENST00000588857 C16orf54Q6UWD8 224 aa16.98■□□□□ 0.31
ATG4D-209ENST00000588857 TRBV19A0A075B6N1 114 aa16.97■□□□□ 0.31
ATG4D-209ENST00000588857 BMI1P35226 326 aa16.97■□□□□ 0.31
ATG4D-209ENST00000588857 RAX2Q96IS3 184 aa16.97■□□□□ 0.31
ATG4D-209ENST00000588857 LINC00052Q96N35 136 aa16.97■□□□□ 0.31
ATG4D-209ENST00000588857 SMPXQ9UHP9 88 aa16.97■□□□□ 0.31
ATG4D-209ENST00000588857 ZNF785A8K8V0 405 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms