RNA–Protein interactions for RNA: ENST00000588855.5

CLPTM1-209, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 1 (best)

Gene CLPTM1, Length 1,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-209ENST00000588855 FFAR4Q5NUL3 377 aa14.18□□□□□ -0.14
CLPTM1-209ENST00000588855 S100A7AQ86SG5 101 aa14.18□□□□□ -0.14
CLPTM1-209ENST00000588855 CYTL1Q9NRR1 136 aa14.18□□□□□ -0.14
CLPTM1-209ENST00000588855 BORCS7-ASMTA0A0B4J1R7 106 aa14.17□□□□□ -0.14
CLPTM1-209ENST00000588855 A0A0D9SG52 128 aa14.17□□□□□ -0.14
CLPTM1-209ENST00000588855 TAAR5O14804 337 aa14.17□□□□□ -0.14
CLPTM1-209ENST00000588855 ATP6V0CP27449 155 aa14.17□□□□□ -0.14
CLPTM1-209ENST00000588855 GATAD1Q8WUU5 269 aa14.17□□□□□ -0.14
CLPTM1-209ENST00000588855 ARPC5LQ9BPX5 153 aa14.17□□□□□ -0.14
CLPTM1-209ENST00000588855 WFDC10AQ9H1F0 79 aa14.17□□□□□ -0.14
CLPTM1-209ENST00000588855 TIMM9Q9Y5J7 89 aa14.17□□□□□ -0.14
CLPTM1-209ENST00000588855 FAM24BQ8N5W8 94 aa14.16□□□□□ -0.14
CLPTM1-209ENST00000588855 DCANP1Q8TF63 244 aa14.16□□□□□ -0.14
CLPTM1-209ENST00000588855 SH3BGRL3Q9H299 93 aa14.16□□□□□ -0.14
CLPTM1-209ENST00000588855 NRN1Q9NPD7 142 aa14.16□□□□□ -0.14
CLPTM1-209ENST00000588855 SMAD5-AS1Q9Y6J3 95 aa14.16□□□□□ -0.14
CLPTM1-209ENST00000588855 TRAV2A0A0B4J234 112 aa14.15□□□□□ -0.14
CLPTM1-209ENST00000588855 K7EQG2 157 aa14.15□□□□□ -0.14
CLPTM1-209ENST00000588855 GALR1P47211 349 aa14.15□□□□□ -0.14
CLPTM1-209ENST00000588855 ODF3L2Q3SX64 289 aa14.15□□□□□ -0.14
CLPTM1-209ENST00000588855 SPATA31B1PQ5VZV4 182 aa14.15□□□□□ -0.14
CLPTM1-209ENST00000588855 MRAPQ8TCY5 172 aa14.15□□□□□ -0.14
CLPTM1-209ENST00000588855 GPR82Q96P67 336 aa14.15□□□□□ -0.14
CLPTM1-209ENST00000588855 C19orf73Q9NVV2 129 aa14.15□□□□□ -0.14
CLPTM1-209ENST00000588855 UBQLN2Q9UHD9 624 aa14.15□□□□□ -0.14
CLPTM1-209ENST00000588855 TRAV5A0A0B4J249 113 aa14.15□□□□□ -0.14
CLPTM1-209ENST00000588855 BCL2L11O43521 198 aa14.15□□□□□ -0.14
CLPTM1-209ENST00000588855 JTBO76095 146 aa14.15□□□□□ -0.14
CLPTM1-209ENST00000588855 FAM78BQ5VT40 261 aa14.15□□□□□ -0.14
CLPTM1-209ENST00000588855 TMUB2Q71RG4 321 aa14.15□□□□□ -0.14
CLPTM1-209ENST00000588855 HYLS1Q96M11 299 aa14.15□□□□□ -0.14
CLPTM1-209ENST00000588855 C17orf77Q96MU5 243 aa14.15□□□□□ -0.14
CLPTM1-209ENST00000588855 PSMG3Q9BT73 122 aaPredicted RBP14.15□□□□□ -0.14
CLPTM1-209ENST00000588855 KANTRA0A1W2PQU2 76 aa14.14□□□□□ -0.15
CLPTM1-209ENST00000588855 RPL7P18124 248 aaKnown RBP14.14□□□□□ -0.15
CLPTM1-209ENST00000588855 LGALSLQ3ZCW2 172 aaPredicted RBP14.14□□□□□ -0.15
CLPTM1-209ENST00000588855 SEPSECSQ9HD40 501 aaKnown RBP14.14□□□□□ -0.15
CLPTM1-209ENST00000588855 RNF24Q9Y225 148 aa14.14□□□□□ -0.15
CLPTM1-209ENST00000588855 OR11H12B2RN74 326 aa14.13□□□□□ -0.15
CLPTM1-209ENST00000588855 MRPS12O15235 138 aaKnown RBP14.13□□□□□ -0.15
CLPTM1-209ENST00000588855 ZFP69Q49AA0 526 aa14.13□□□□□ -0.15
CLPTM1-209ENST00000588855 MIR17HGQ75NE6 70 aa14.13□□□□□ -0.15
CLPTM1-209ENST00000588855 DEFB125Q8N687 156 aa14.13□□□□□ -0.15
CLPTM1-209ENST00000588855 OR2G3Q8NGZ4 309 aa14.13□□□□□ -0.15
CLPTM1-209ENST00000588855 MAP6D1Q9H9H5 199 aa14.13□□□□□ -0.15
CLPTM1-209ENST00000588855 PFDN1O60925 122 aa14.12□□□□□ -0.15
CLPTM1-209ENST00000588855 ZNF688P0C7X2 276 aa14.12□□□□□ -0.15
CLPTM1-209ENST00000588855 RAB2AP61019 212 aa14.12□□□□□ -0.15
CLPTM1-209ENST00000588855 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa14.12□□□□□ -0.15
CLPTM1-209ENST00000588855 GNPNAT1Q96EK6 184 aaPredicted RBP14.12□□□□□ -0.15
CLPTM1-209ENST00000588855 FUT9Q9Y231 359 aa14.12□□□□□ -0.15
CLPTM1-209ENST00000588855 SOCS3O14543 225 aa14.11□□□□□ -0.15
CLPTM1-209ENST00000588855 IGHV4-30-4P0DP06 118 aa14.11□□□□□ -0.15
CLPTM1-209ENST00000588855 ATF4P18848 351 aaPredicted RBP14.11□□□□□ -0.15
CLPTM1-209ENST00000588855 M6PRP20645 277 aa14.11□□□□□ -0.15
CLPTM1-209ENST00000588855 ACOT6Q3I5F7 207 aaPredicted RBP14.11□□□□□ -0.15
CLPTM1-209ENST00000588855 DEFB121Q5J5C9 76 aa14.11□□□□□ -0.15
CLPTM1-209ENST00000588855 BPIFA4PQ86YQ2 179 aa14.11□□□□□ -0.15
CLPTM1-209ENST00000588855 ZNF471Q9BX82 626 aaPredicted RBP14.11□□□□□ -0.15
CLPTM1-209ENST00000588855 MRPL32Q9BYC8 188 aaKnown RBP14.11□□□□□ -0.15
CLPTM1-209ENST00000588855 SNRPCP09234 159 aaKnown RBP14.1□□□□□ -0.15
CLPTM1-209ENST00000588855 SERF2P84101 59 aa14.1□□□□□ -0.15
CLPTM1-209ENST00000588855 ZNF124Q15973 351 aa14.1□□□□□ -0.15
CLPTM1-209ENST00000588855 FAM110AQ9BQ89 295 aa14.1□□□□□ -0.15
CLPTM1-209ENST00000588855 SLC25A2Q9BXI2 301 aa14.1□□□□□ -0.15
CLPTM1-209ENST00000588855 A0A087X0K7 114 aa14.1□□□□□ -0.15
CLPTM1-209ENST00000588855 EIF3GO75821 320 aaKnown RBP eCLIP14.1□□□□□ -0.15
CLPTM1-209ENST00000588855 MEOX2P50222 304 aa14.1□□□□□ -0.15
CLPTM1-209ENST00000588855 DEFB131AP59861 70 aa14.1□□□□□ -0.15
CLPTM1-209ENST00000588855 RHOBP62745 196 aa14.1□□□□□ -0.15
CLPTM1-209ENST00000588855 APRG1Q8IVJ8 170 aa14.1□□□□□ -0.15
CLPTM1-209ENST00000588855 C9orf62Q8N4C0 152 aa14.1□□□□□ -0.15
CLPTM1-209ENST00000588855 FAM167A-AS1Q96KT0 104 aa14.1□□□□□ -0.15
CLPTM1-209ENST00000588855 CITED4Q96RK1 184 aa14.1□□□□□ -0.15
CLPTM1-209ENST00000588855 SRD5A3Q9H8P0 318 aa14.1□□□□□ -0.15
CLPTM1-209ENST00000588855 IGLC2P0DOY2 106 aa14.09□□□□□ -0.15
CLPTM1-209ENST00000588855 FAM122CQ6P4D5 195 aa14.09□□□□□ -0.15
CLPTM1-209ENST00000588855 OR10G4Q8NGN3 311 aa14.09□□□□□ -0.15
CLPTM1-209ENST00000588855 OR10G9Q8NGN4 311 aa14.09□□□□□ -0.15
CLPTM1-209ENST00000588855 OR10G7Q8NGN6 311 aa14.09□□□□□ -0.15
CLPTM1-209ENST00000588855 DNAH9Q9NYC9 4486 aa14.08□□□□□ -0.16
CLPTM1-209ENST00000588855 H3BTX0 84 aa14.08□□□□□ -0.16
CLPTM1-209ENST00000588855 PYYP10082 97 aa14.08□□□□□ -0.16
CLPTM1-209ENST00000588855 SPP1P10451 314 aa14.08□□□□□ -0.16
CLPTM1-209ENST00000588855 CMC4P56277 68 aaPredicted RBP14.08□□□□□ -0.16
CLPTM1-209ENST00000588855 PSMG4Q5JS54 123 aa14.08□□□□□ -0.16
CLPTM1-209ENST00000588855 C16orf92Q96LL3 132 aa14.08□□□□□ -0.16
CLPTM1-209ENST00000588855 TMEM14CQ9P0S9 112 aa14.08□□□□□ -0.16
CLPTM1-209ENST00000588855 H3BQ15 152 aa14.07□□□□□ -0.16
CLPTM1-209ENST00000588855 ISLRO14498 428 aa14.07□□□□□ -0.16
CLPTM1-209ENST00000588855 PSMB3P49720 205 aa14.07□□□□□ -0.16
CLPTM1-209ENST00000588855 NKX2-5P52952 324 aaPredicted RBP14.07□□□□□ -0.16
CLPTM1-209ENST00000588855 SNRPD3P62318 126 aaKnown RBP14.07□□□□□ -0.16
CLPTM1-209ENST00000588855 IGFL4Q6B9Z1 124 aa14.07□□□□□ -0.16
CLPTM1-209ENST00000588855 RPP25LQ8N5L8 163 aaKnown RBP14.07□□□□□ -0.16
CLPTM1-209ENST00000588855 TUBA4BQ9H853 241 aa14.07□□□□□ -0.16
CLPTM1-209ENST00000588855 TRAV8-2A0A0B4J237 113 aa14.06□□□□□ -0.16
CLPTM1-209ENST00000588855 A0A1W2PPV4 95 aa14.06□□□□□ -0.16
CLPTM1-209ENST00000588855 A8MZ25 164 aa14.06□□□□□ -0.16
CLPTM1-209ENST00000588855 MBP02144 154 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms