RNA–Protein interactions for RNA: ENST00000587740.5

NCLN-203, Transcript of nicalin, humanhuman

TSL 1 (best)

Gene NCLN, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-203ENST00000587740 HIGD1AQ9Y241 93 aa11.6□□□□□ -0.55
NCLN-203ENST00000587740 Q5BKY6 102 aa11.59□□□□□ -0.55
NCLN-203ENST00000587740 C1orf194Q5T5A4 169 aa11.59□□□□□ -0.55
NCLN-203ENST00000587740 MIC13Q5XKP0 118 aa11.59□□□□□ -0.55
NCLN-203ENST00000587740 Q6ZRG5 221 aa11.59□□□□□ -0.55
NCLN-203ENST00000587740 OR8I2Q8N0Y5 310 aa11.59□□□□□ -0.55
NCLN-203ENST00000587740 STPG3Q8N7X2 389 aa11.59□□□□□ -0.55
NCLN-203ENST00000587740 CHAC2Q8WUX2 184 aa11.59□□□□□ -0.55
NCLN-203ENST00000587740 ATP5SQ99766 215 aa11.59□□□□□ -0.55
NCLN-203ENST00000587740 SMIM3Q9BZL3 60 aa11.59□□□□□ -0.55
NCLN-203ENST00000587740 FXYD6-FXYD2A0A087WZ82 144 aa11.58□□□□□ -0.56
NCLN-203ENST00000587740 TRAV2A0A0B4J234 112 aa11.58□□□□□ -0.56
NCLN-203ENST00000587740 ZNF98A6NK75 572 aa11.58□□□□□ -0.56
NCLN-203ENST00000587740 IFNA5P01569 189 aa11.58□□□□□ -0.56
NCLN-203ENST00000587740 RPL29P47914 159 aaKnown RBP11.58□□□□□ -0.56
NCLN-203ENST00000587740 CMC4P56277 68 aaPredicted RBP11.58□□□□□ -0.56
NCLN-203ENST00000587740 OPCMLQ14982 345 aa11.58□□□□□ -0.56
NCLN-203ENST00000587740 CEMP1Q6PRD7 247 aaPredicted RBP11.58□□□□□ -0.56
NCLN-203ENST00000587740 Q6ZNX1 250 aa11.58□□□□□ -0.56
NCLN-203ENST00000587740 INO80EQ8NBZ0 244 aaPredicted RBP11.58□□□□□ -0.56
NCLN-203ENST00000587740 AQP10Q96PS8 301 aa11.58□□□□□ -0.56
NCLN-203ENST00000587740 NPCDR1Q9BY65 106 aa11.58□□□□□ -0.56
NCLN-203ENST00000587740 SLC25A39Q9BZJ4 359 aaPredicted RBP11.58□□□□□ -0.56
NCLN-203ENST00000587740 WDR61Q9GZS3 305 aaKnown RBP11.58□□□□□ -0.56
NCLN-203ENST00000587740 ARV1Q9H2C2 271 aa11.58□□□□□ -0.56
NCLN-203ENST00000587740 SLC25A22Q9H936 323 aa11.58□□□□□ -0.56
NCLN-203ENST00000587740 UBQLN2Q9UHD9 624 aa11.58□□□□□ -0.56
NCLN-203ENST00000587740 ELOA3CA0A087WX78 387 aaPredicted RBP11.57□□□□□ -0.56
NCLN-203ENST00000587740 A0A0J9YWU9 116 aa11.57□□□□□ -0.56
NCLN-203ENST00000587740 NUPR2A6NF83 97 aa11.57□□□□□ -0.56
NCLN-203ENST00000587740 COX7A2P2O60397 106 aa11.57□□□□□ -0.56
NCLN-203ENST00000587740 B2MP61769 119 aa11.57□□□□□ -0.56
NCLN-203ENST00000587740 PRR20EP86478 221 aa11.57□□□□□ -0.56
NCLN-203ENST00000587740 PRR20CP86479 221 aa11.57□□□□□ -0.56
NCLN-203ENST00000587740 PRR20DP86480 221 aa11.57□□□□□ -0.56
NCLN-203ENST00000587740 PRR20BP86481 221 aa11.57□□□□□ -0.56
NCLN-203ENST00000587740 PRR20AP86496 221 aa11.57□□□□□ -0.56
NCLN-203ENST00000587740 ZNF709Q8N972 641 aa11.57□□□□□ -0.56
NCLN-203ENST00000587740 OR1L4Q8NGR5 311 aa11.57□□□□□ -0.56
NCLN-203ENST00000587740 SCGB1C1Q8TD33 95 aa11.57□□□□□ -0.56
NCLN-203ENST00000587740 RNF24Q9Y225 148 aa11.57□□□□□ -0.56
NCLN-203ENST00000587740 PXMP4Q9Y6I8 212 aa11.57□□□□□ -0.56
NCLN-203ENST00000587740 VPS13DQ5THJ4 4388 aa11.56□□□□□ -0.56
NCLN-203ENST00000587740 C17orf112F2Z3M2 114 aa11.56□□□□□ -0.56
NCLN-203ENST00000587740 H3BRN7 92 aa11.56□□□□□ -0.56
NCLN-203ENST00000587740 K7EQG2 157 aa11.56□□□□□ -0.56
NCLN-203ENST00000587740 GALR1P47211 349 aa11.56□□□□□ -0.56
NCLN-203ENST00000587740 C10orf113Q5VZT2 155 aa11.56□□□□□ -0.56
NCLN-203ENST00000587740 PATE2Q6UY27 113 aa11.56□□□□□ -0.56
NCLN-203ENST00000587740 GPR82Q96P67 336 aa11.56□□□□□ -0.56
NCLN-203ENST00000587740 UHRF2Q96PU4 802 aa11.56□□□□□ -0.56
NCLN-203ENST00000587740 PFDN5Q99471 154 aa11.56□□□□□ -0.56
NCLN-203ENST00000587740 SHANK2-AS3Q9BTD1 123 aa11.56□□□□□ -0.56
NCLN-203ENST00000587740 DNAJC4Q9NNZ3 241 aa11.56□□□□□ -0.56
NCLN-203ENST00000587740 NRN1Q9NPD7 142 aa11.56□□□□□ -0.56
NCLN-203ENST00000587740 KCNIP2Q9NS61 270 aa11.56□□□□□ -0.56
NCLN-203ENST00000587740 SLC39A9Q9NUM3 307 aa11.56□□□□□ -0.56
NCLN-203ENST00000587740 ODF3L2Q3SX64 289 aa11.55□□□□□ -0.56
NCLN-203ENST00000587740 LEMD1Q68G75 181 aa11.55□□□□□ -0.56
NCLN-203ENST00000587740 LINC00305Q7Z4B0 112 aa11.55□□□□□ -0.56
NCLN-203ENST00000587740 DCANP1Q8TF63 244 aa11.55□□□□□ -0.56
NCLN-203ENST00000587740 TMEM37Q8WXS4 190 aa11.55□□□□□ -0.56
NCLN-203ENST00000587740 SCRT1Q9BWW7 348 aa11.55□□□□□ -0.56
NCLN-203ENST00000587740 SLC25A32Q9H2D1 315 aa11.55□□□□□ -0.56
NCLN-203ENST00000587740 TNFSF18Q9UNG2 199 aa11.55□□□□□ -0.56
NCLN-203ENST00000587740 AGRNO00468 2067 aa11.55□□□□□ -0.56
NCLN-203ENST00000587740 G3V3Q6 166 aa11.54□□□□□ -0.56
NCLN-203ENST00000587740 PARD6GQ9BYG4 376 aaPredicted RBP11.54□□□□□ -0.56
NCLN-203ENST00000587740 MAP6D1Q9H9H5 199 aa11.54□□□□□ -0.56
NCLN-203ENST00000587740 WFDC1Q9HC57 220 aa11.54□□□□□ -0.56
NCLN-203ENST00000587740 LOC102724200A0A096LPH7 203 aaPredicted RBP11.53□□□□□ -0.56
NCLN-203ENST00000587740 RNF222A6NCQ9 220 aa11.53□□□□□ -0.56
NCLN-203ENST00000587740 SMLR1H3BR10 107 aa11.53□□□□□ -0.56
NCLN-203ENST00000587740 RPL7P18124 248 aaKnown RBP11.53□□□□□ -0.56
NCLN-203ENST00000587740 ZNF266Q14584 549 aa11.53□□□□□ -0.56
NCLN-203ENST00000587740 APRG1Q8IVJ8 170 aa11.53□□□□□ -0.56
NCLN-203ENST00000587740 ZNF688P0C7X2 276 aa11.52□□□□□ -0.57
NCLN-203ENST00000587740 ATF4P18848 351 aaPredicted RBP11.52□□□□□ -0.57
NCLN-203ENST00000587740 ID1P41134 155 aa11.52□□□□□ -0.57
NCLN-203ENST00000587740 MEOX2P50222 304 aa11.52□□□□□ -0.57
NCLN-203ENST00000587740 DEFB131AP59861 70 aa11.52□□□□□ -0.57
NCLN-203ENST00000587740 SNRPD3P62318 126 aaKnown RBP11.52□□□□□ -0.57
NCLN-203ENST00000587740 FAM24BQ8N5W8 94 aa11.52□□□□□ -0.57
NCLN-203ENST00000587740 GATAD1Q8WUU5 269 aa11.52□□□□□ -0.57
NCLN-203ENST00000587740 RSG1Q9BU20 258 aa11.52□□□□□ -0.57
NCLN-203ENST00000587740 SEPSECSQ9HD40 501 aaKnown RBP11.52□□□□□ -0.57
NCLN-203ENST00000587740 DNAH6Q9C0G6 4158 aa11.51□□□□□ -0.57
NCLN-203ENST00000587740 hCG_2014768A0A024R1R8 64 aa11.51□□□□□ -0.57
NCLN-203ENST00000587740 ARPC5O15511 151 aa11.51□□□□□ -0.57
NCLN-203ENST00000587740 SAMD13Q5VXD3 122 aa11.51□□□□□ -0.57
NCLN-203ENST00000587740 LGALS9CQ6DKI2 356 aa11.51□□□□□ -0.57
NCLN-203ENST00000587740 BPIFA4PQ86YQ2 179 aa11.51□□□□□ -0.57
NCLN-203ENST00000587740 MFFQ9GZY8 342 aa11.51□□□□□ -0.57
NCLN-203ENST00000587740 KLK5Q9Y337 293 aaPredicted RBP11.51□□□□□ -0.57
NCLN-203ENST00000587740 ZNF124Q15973 351 aa11.5□□□□□ -0.57
NCLN-203ENST00000587740 PSMG4Q5JS54 123 aa11.5□□□□□ -0.57
NCLN-203ENST00000587740 FFAR4Q5NUL3 377 aa11.5□□□□□ -0.57
NCLN-203ENST00000587740 SPRY2O43597 315 aa11.49□□□□□ -0.57
NCLN-203ENST00000587740 PSMB3P49720 205 aa11.49□□□□□ -0.57
NCLN-203ENST00000587740 GCSAMLQ5JQS6 135 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 168.8 ms