RNA–Protein interactions for RNA: ENST00000586407.1

LIG3-208, Transcript of DNA ligase 3, humanhuman

TSL 5

Gene LIG3, Length 815 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-208ENST00000586407 SHANK2-AS3Q9BTD1 123 aa20.34■□□□□ 0.85
LIG3-208ENST00000586407 FAM24AA6NFZ4 105 aa20.33■□□□□ 0.85
LIG3-208ENST00000586407 HYPMO75409 117 aa20.33■□□□□ 0.85
LIG3-208ENST00000586407 S100A10P60903 97 aa20.33■□□□□ 0.85
LIG3-208ENST00000586407 RAP2BP61225 183 aa20.33■□□□□ 0.85
LIG3-208ENST00000586407 NUTF2P61970 127 aaKnown RBP20.33■□□□□ 0.85
LIG3-208ENST00000586407 TEPPQ6URK8 271 aa20.33■□□□□ 0.85
LIG3-208ENST00000586407 ARL6Q9H0F7 186 aa20.33■□□□□ 0.85
LIG3-208ENST00000586407 KLK5Q9Y337 293 aaPredicted RBP20.33■□□□□ 0.85
LIG3-208ENST00000586407 ELOA3CA0A087WX78 387 aaPredicted RBP20.32■□□□□ 0.84
LIG3-208ENST00000586407 FNDC10F2Z333 226 aa20.32■□□□□ 0.84
LIG3-208ENST00000586407 CST7O76096 145 aa20.32■□□□□ 0.84
LIG3-208ENST00000586407 MIFP14174 115 aa20.32■□□□□ 0.84
LIG3-208ENST00000586407 CAV2P51636 162 aa20.32■□□□□ 0.84
LIG3-208ENST00000586407 FGL1Q08830 312 aa20.32■□□□□ 0.84
LIG3-208ENST00000586407 PATE2Q6UY27 113 aa20.32■□□□□ 0.84
LIG3-208ENST00000586407 ENKURQ8TC29 256 aa20.32■□□□□ 0.84
LIG3-208ENST00000586407 SLC35B3Q9H1N7 401 aa20.32■□□□□ 0.84
LIG3-208ENST00000586407 LY6G6CO95867 125 aa20.31■□□□□ 0.84
LIG3-208ENST00000586407 MEOX2P50222 304 aa20.31■□□□□ 0.84
LIG3-208ENST00000586407 PLP1P60201 277 aa20.31■□□□□ 0.84
LIG3-208ENST00000586407 SELENOTP62341 195 aa20.31■□□□□ 0.84
LIG3-208ENST00000586407 RNF182Q8N6D2 247 aa20.31■□□□□ 0.84
LIG3-208ENST00000586407 C1QTNF4Q9BXJ3 329 aa20.31■□□□□ 0.84
LIG3-208ENST00000586407 MFFQ9GZY8 342 aa20.31■□□□□ 0.84
LIG3-208ENST00000586407 HYDINQ4G0P3 5121 aa20.31■□□□□ 0.84
LIG3-208ENST00000586407 AGPAT2O15120 278 aa20.3■□□□□ 0.84
LIG3-208ENST00000586407 DEDDO75618 318 aa20.3■□□□□ 0.84
LIG3-208ENST00000586407 RAB32Q13637 225 aa20.3■□□□□ 0.84
LIG3-208ENST00000586407 FAM78BQ5VT40 261 aa20.3■□□□□ 0.84
LIG3-208ENST00000586407 MGST2Q99735 147 aa20.3■□□□□ 0.84
LIG3-208ENST00000586407 TRAV8-2A0A0B4J237 113 aa20.29■□□□□ 0.84
LIG3-208ENST00000586407 A0A0J9YX75 114 aa20.29■□□□□ 0.84
LIG3-208ENST00000586407 PRB4P10163 310 aaPredicted RBP20.29■□□□□ 0.84
LIG3-208ENST00000586407 IL15RAQ13261 267 aa20.29■□□□□ 0.84
LIG3-208ENST00000586407 EBLN2Q6P2I7 272 aa20.29■□□□□ 0.84
LIG3-208ENST00000586407 ZNF709Q8N972 641 aa20.29■□□□□ 0.84
LIG3-208ENST00000586407 GPR82Q96P67 336 aa20.29■□□□□ 0.84
LIG3-208ENST00000586407 RPRMQ9NS64 109 aa20.29■□□□□ 0.84
LIG3-208ENST00000586407 GOSR2O14653 212 aa20.28■□□□□ 0.84
LIG3-208ENST00000586407 SIX6O95475 246 aa20.28■□□□□ 0.84
LIG3-208ENST00000586407 ARV1Q9H2C2 271 aa20.28■□□□□ 0.84
LIG3-208ENST00000586407 CELA1Q9UNI1 258 aa20.28■□□□□ 0.84
LIG3-208ENST00000586407 IGHV3OR16-12A0A075B7B8 117 aa20.27■□□□□ 0.84
LIG3-208ENST00000586407 IGSF23A1L1A6 192 aa20.27■□□□□ 0.84
LIG3-208ENST00000586407 ZNF705DP0CH99 300 aaPredicted RBP20.27■□□□□ 0.84
LIG3-208ENST00000586407 ZNF705BP0CI00 300 aaPredicted RBP20.27■□□□□ 0.84
LIG3-208ENST00000586407 HLA-DMBP28068 263 aa20.27■□□□□ 0.84
LIG3-208ENST00000586407 S100A7P31151 101 aa20.27■□□□□ 0.84
LIG3-208ENST00000586407 ZNF546Q86UE3 836 aa20.27■□□□□ 0.84
LIG3-208ENST00000586407 GGACTQ9BVM4 153 aa20.27■□□□□ 0.84
LIG3-208ENST00000586407 SNRPCP09234 159 aaKnown RBP20.26■□□□□ 0.83
LIG3-208ENST00000586407 RPL7P18124 248 aaKnown RBP20.26■□□□□ 0.83
LIG3-208ENST00000586407 SAMD13Q5VXD3 122 aa20.26■□□□□ 0.83
LIG3-208ENST00000586407 ZNF767PQ75MW2 155 aa20.26■□□□□ 0.83
LIG3-208ENST00000586407 NRARPQ7Z6K4 114 aa20.26■□□□□ 0.83
LIG3-208ENST00000586407 PVALBP20472 110 aaPredicted RBP20.25■□□□□ 0.83
LIG3-208ENST00000586407 PSG9Q00887 426 aa20.25■□□□□ 0.83
LIG3-208ENST00000586407 ZNF705AQ6ZN79 300 aaPredicted RBP20.24■□□□□ 0.83
LIG3-208ENST00000586407 MORN5Q5VZ52 161 aa20.23■□□□□ 0.83
LIG3-208ENST00000586407 SPATA31B1PQ5VZV4 182 aa20.23■□□□□ 0.83
LIG3-208ENST00000586407 MIC13Q5XKP0 118 aa20.23■□□□□ 0.83
LIG3-208ENST00000586407 Q6ZTC4 211 aa20.23■□□□□ 0.83
LIG3-208ENST00000586407 CLUHP3Q96NS8 147 aa20.23■□□□□ 0.83
LIG3-208ENST00000586407 HRH4Q9H3N8 390 aa20.23■□□□□ 0.83
LIG3-208ENST00000586407 GPN1Q9HCN4 374 aaPredicted RBP20.23■□□□□ 0.83
LIG3-208ENST00000586407 LYRM2Q9NU23 88 aaPredicted RBP20.23■□□□□ 0.83
LIG3-208ENST00000586407 UBE2L5PA0A1B0GUS4 154 aa20.22■□□□□ 0.83
LIG3-208ENST00000586407 ZNF705FA8MVS1 300 aaPredicted RBP20.22■□□□□ 0.83
LIG3-208ENST00000586407 MRPS12O15235 138 aaKnown RBP20.22■□□□□ 0.83
LIG3-208ENST00000586407 CAMLGP49069 296 aa20.22■□□□□ 0.83
LIG3-208ENST00000586407 AMTNQ6UX39 209 aa20.22■□□□□ 0.83
LIG3-208ENST00000586407 LINC00305Q7Z4B0 112 aa20.22■□□□□ 0.83
LIG3-208ENST00000586407 TMEM252Q8N6L7 170 aa20.22■□□□□ 0.83
LIG3-208ENST00000586407 ZNF738Q8NE65 137 aa20.22■□□□□ 0.83
LIG3-208ENST00000586407 TMEM37Q8WXS4 190 aa20.22■□□□□ 0.83
LIG3-208ENST00000586407 UQCC1Q9NVA1 299 aa20.22■□□□□ 0.83
LIG3-208ENST00000586407 COX7A2P2O60397 106 aa20.21■□□□□ 0.83
LIG3-208ENST00000586407 SULT1A1P50225 295 aa20.21■□□□□ 0.83
LIG3-208ENST00000586407 CNN1P51911 297 aaKnown RBP20.21■□□□□ 0.83
LIG3-208ENST00000586407 A0A087X0K7 114 aa20.2■□□□□ 0.82
LIG3-208ENST00000586407 INMT-MINDY4F8WBC2 141 aa20.2■□□□□ 0.82
LIG3-208ENST00000586407 H3BTX0 84 aa20.2■□□□□ 0.82
LIG3-208ENST00000586407 EMP1P54849 157 aa20.2■□□□□ 0.82
LIG3-208ENST00000586407 PXDC1Q5TGL8 231 aa20.2■□□□□ 0.82
LIG3-208ENST00000586407 C1orf158Q8N1D5 194 aa20.2■□□□□ 0.82
LIG3-208ENST00000586407 C2CD4CQ8TF44 421 aa20.2■□□□□ 0.82
LIG3-208ENST00000586407 WDR83OSQ9Y284 106 aa20.2■□□□□ 0.82
LIG3-208ENST00000586407 A8MTW9 85 aa20.19■□□□□ 0.82
LIG3-208ENST00000586407 CXCL3P19876 107 aa20.19■□□□□ 0.82
LIG3-208ENST00000586407 BAXQ07812 192 aa20.18■□□□□ 0.82
LIG3-208ENST00000586407 OPCMLQ14982 345 aa20.18■□□□□ 0.82
LIG3-208ENST00000586407 VWC2Q2TAL6 325 aa20.18■□□□□ 0.82
LIG3-208ENST00000586407 C12orf74Q32Q52 190 aa20.18■□□□□ 0.82
LIG3-208ENST00000586407 LRRC37A5PQ49AS3 106 aa20.18■□□□□ 0.82
LIG3-208ENST00000586407 C10orf113Q5VZT2 155 aa20.18■□□□□ 0.82
LIG3-208ENST00000586407 STX12Q86Y82 276 aa20.18■□□□□ 0.82
LIG3-208ENST00000586407 OR11H7Q8NGC8 314 aa20.18■□□□□ 0.82
LIG3-208ENST00000586407 LRRC20Q8TCA0 184 aa20.18■□□□□ 0.82
LIG3-208ENST00000586407 NEU1Q99519 415 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms