RNA–Protein interactions for RNA: ENST00000585752.5

ATG4D-203, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 729 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-203ENST00000585752 GALR1P47211 349 aa13.83□□□□□ -0.2
ATG4D-203ENST00000585752 INO80EQ8NBZ0 244 aaPredicted RBP13.83□□□□□ -0.2
ATG4D-203ENST00000585752 OR2T35Q8NGX2 323 aa13.83□□□□□ -0.2
ATG4D-203ENST00000585752 SCGB1C1Q8TD33 95 aa13.83□□□□□ -0.2
ATG4D-203ENST00000585752 RNF183Q96D59 192 aa13.83□□□□□ -0.2
ATG4D-203ENST00000585752 ATP5SQ99766 215 aa13.83□□□□□ -0.2
ATG4D-203ENST00000585752 SMIM3Q9BZL3 60 aa13.83□□□□□ -0.2
ATG4D-203ENST00000585752 CSTL1Q9H114 145 aa13.83□□□□□ -0.2
ATG4D-203ENST00000585752 MAP6D1Q9H9H5 199 aa13.83□□□□□ -0.2
ATG4D-203ENST00000585752 KCNIP2Q9NS61 270 aa13.83□□□□□ -0.2
ATG4D-203ENST00000585752 FXYD6-FXYD2A0A087WZ82 144 aa13.82□□□□□ -0.2
ATG4D-203ENST00000585752 ZNF98A6NK75 572 aa13.82□□□□□ -0.2
ATG4D-203ENST00000585752 C17orf112F2Z3M2 114 aa13.82□□□□□ -0.2
ATG4D-203ENST00000585752 PLP1P60201 277 aa13.82□□□□□ -0.2
ATG4D-203ENST00000585752 PMS2P11Q13670 270 aa13.82□□□□□ -0.2
ATG4D-203ENST00000585752 OR1L4Q8NGR5 311 aa13.82□□□□□ -0.2
ATG4D-203ENST00000585752 GPR82Q96P67 336 aa13.82□□□□□ -0.2
ATG4D-203ENST00000585752 SLC25A39Q9BZJ4 359 aaPredicted RBP13.82□□□□□ -0.2
ATG4D-203ENST00000585752 NRN1Q9NPD7 142 aa13.82□□□□□ -0.2
ATG4D-203ENST00000585752 ELOA3CA0A087WX78 387 aaPredicted RBP13.81□□□□□ -0.2
ATG4D-203ENST00000585752 B2MP61769 119 aa13.81□□□□□ -0.2
ATG4D-203ENST00000585752 MIC13Q5XKP0 118 aa13.81□□□□□ -0.2
ATG4D-203ENST00000585752 PFDN5Q99471 154 aa13.81□□□□□ -0.2
ATG4D-203ENST00000585752 NPCDR1Q9BY65 106 aa13.81□□□□□ -0.2
ATG4D-203ENST00000585752 ARV1Q9H2C2 271 aa13.81□□□□□ -0.2
ATG4D-203ENST00000585752 RPL29P47914 159 aaKnown RBP13.8□□□□□ -0.2
ATG4D-203ENST00000585752 SNRPD3P62318 126 aaKnown RBP13.8□□□□□ -0.2
ATG4D-203ENST00000585752 OPCMLQ14982 345 aa13.8□□□□□ -0.2
ATG4D-203ENST00000585752 ZNF124Q15973 351 aa13.8□□□□□ -0.2
ATG4D-203ENST00000585752 C10orf113Q5VZT2 155 aa13.8□□□□□ -0.2
ATG4D-203ENST00000585752 STHQ8IWL8 128 aa13.8□□□□□ -0.2
ATG4D-203ENST00000585752 PXMP4Q9Y6I8 212 aa13.8□□□□□ -0.2
ATG4D-203ENST00000585752 TENM2Q9NT68 2774 aa13.79□□□□□ -0.2
ATG4D-203ENST00000585752 NUPR2A6NF83 97 aa13.79□□□□□ -0.2
ATG4D-203ENST00000585752 H3BRN7 92 aa13.79□□□□□ -0.2
ATG4D-203ENST00000585752 ATF4P18848 351 aaPredicted RBP13.79□□□□□ -0.2
ATG4D-203ENST00000585752 ID1P41134 155 aa13.79□□□□□ -0.2
ATG4D-203ENST00000585752 DEFB131AP59861 70 aa13.79□□□□□ -0.2
ATG4D-203ENST00000585752 SAMD13Q5VXD3 122 aa13.79□□□□□ -0.2
ATG4D-203ENST00000585752 LINC00305Q7Z4B0 112 aa13.79□□□□□ -0.2
ATG4D-203ENST00000585752 GATAD1Q8WUU5 269 aa13.79□□□□□ -0.2
ATG4D-203ENST00000585752 UHRF2Q96PU4 802 aa13.79□□□□□ -0.2
ATG4D-203ENST00000585752 RARRES2Q99969 163 aa13.79□□□□□ -0.2
ATG4D-203ENST00000585752 SHANK2-AS3Q9BTD1 123 aa13.79□□□□□ -0.2
ATG4D-203ENST00000585752 SCRT1Q9BWW7 348 aa13.79□□□□□ -0.2
ATG4D-203ENST00000585752 WDR61Q9GZS3 305 aaKnown RBP13.79□□□□□ -0.2
ATG4D-203ENST00000585752 SLC39A9Q9NUM3 307 aa13.79□□□□□ -0.2
ATG4D-203ENST00000585752 CSMD3Q7Z407 3707 aa13.79□□□□□ -0.2
ATG4D-203ENST00000585752 K7EQG2 157 aa13.78□□□□□ -0.2
ATG4D-203ENST00000585752 RPL7P18124 248 aaKnown RBP13.78□□□□□ -0.2
ATG4D-203ENST00000585752 MEOX2P50222 304 aa13.78□□□□□ -0.2
ATG4D-203ENST00000585752 LEMD1Q68G75 181 aa13.78□□□□□ -0.2
ATG4D-203ENST00000585752 CHAC2Q8WUX2 184 aa13.78□□□□□ -0.2
ATG4D-203ENST00000585752 SLC25A32Q9H2D1 315 aa13.78□□□□□ -0.2
ATG4D-203ENST00000585752 DNAJC4Q9NNZ3 241 aa13.78□□□□□ -0.2
ATG4D-203ENST00000585752 KLK5Q9Y337 293 aaPredicted RBP13.78□□□□□ -0.2
ATG4D-203ENST00000585752 DYNC2H1Q8NCM8 4307 aaKnown RBP13.78□□□□□ -0.2
ATG4D-203ENST00000585752 STARD9Q9P2P6 4700 aa13.78□□□□□ -0.2
ATG4D-203ENST00000585752 LYSTQ99698 3801 aa13.78□□□□□ -0.2
ATG4D-203ENST00000585752 CA1P00915 261 aaPredicted RBP13.77□□□□□ -0.21
ATG4D-203ENST00000585752 ZNF688P0C7X2 276 aa13.77□□□□□ -0.21
ATG4D-203ENST00000585752 PRR20EP86478 221 aa13.77□□□□□ -0.21
ATG4D-203ENST00000585752 PRR20CP86479 221 aa13.77□□□□□ -0.21
ATG4D-203ENST00000585752 PRR20DP86480 221 aa13.77□□□□□ -0.21
ATG4D-203ENST00000585752 PRR20BP86481 221 aa13.77□□□□□ -0.21
ATG4D-203ENST00000585752 PRR20AP86496 221 aa13.77□□□□□ -0.21
ATG4D-203ENST00000585752 ZNF266Q14584 549 aa13.77□□□□□ -0.21
ATG4D-203ENST00000585752 DCANP1Q8TF63 244 aa13.77□□□□□ -0.21
ATG4D-203ENST00000585752 AQP10Q96PS8 301 aa13.77□□□□□ -0.21
ATG4D-203ENST00000585752 Q5BKY6 102 aa13.76□□□□□ -0.21
ATG4D-203ENST00000585752 RSG1Q9BU20 258 aa13.76□□□□□ -0.21
ATG4D-203ENST00000585752 PSMG4Q5JS54 123 aa13.75□□□□□ -0.21
ATG4D-203ENST00000585752 PATE2Q6UY27 113 aa13.75□□□□□ -0.21
ATG4D-203ENST00000585752 BPIFA4PQ86YQ2 179 aa13.75□□□□□ -0.21
ATG4D-203ENST00000585752 OR11H2Q8NH07 326 aa13.75□□□□□ -0.21
ATG4D-203ENST00000585752 LRRC20Q8TCA0 184 aa13.75□□□□□ -0.21
ATG4D-203ENST00000585752 C16orf92Q96LL3 132 aa13.75□□□□□ -0.21
ATG4D-203ENST00000585752 FAM24BQ8N5W8 94 aa13.74□□□□□ -0.21
ATG4D-203ENST00000585752 TMEM37Q8WXS4 190 aa13.74□□□□□ -0.21
ATG4D-203ENST00000585752 LINC00052Q96N35 136 aa13.74□□□□□ -0.21
ATG4D-203ENST00000585752 PARD6GQ9BYG4 376 aaPredicted RBP13.74□□□□□ -0.21
ATG4D-203ENST00000585752 SEPSECSQ9HD40 501 aaKnown RBP13.74□□□□□ -0.21
ATG4D-203ENST00000585752 PSMB3P49720 205 aa13.73□□□□□ -0.21
ATG4D-203ENST00000585752 CEMP1Q6PRD7 247 aaPredicted RBP13.73□□□□□ -0.21
ATG4D-203ENST00000585752 TNFSF18Q9UNG2 199 aa13.73□□□□□ -0.21
ATG4D-203ENST00000585752 RYR2Q92736 4967 aa13.72□□□□□ -0.21
ATG4D-203ENST00000585752 BORCS7-ASMTA0A0B4J1R7 106 aa13.72□□□□□ -0.21
ATG4D-203ENST00000585752 ISLRO14498 428 aa13.72□□□□□ -0.21
ATG4D-203ENST00000585752 ARPC5O15511 151 aa13.72□□□□□ -0.21
ATG4D-203ENST00000585752 LY6G6CO95867 125 aa13.72□□□□□ -0.21
ATG4D-203ENST00000585752 TMEM41BQ5BJD5 291 aa13.72□□□□□ -0.21
ATG4D-203ENST00000585752 FFAR4Q5NUL3 377 aa13.72□□□□□ -0.21
ATG4D-203ENST00000585752 Q6ZNX1 250 aa13.72□□□□□ -0.21
ATG4D-203ENST00000585752 MFFQ9GZY8 342 aa13.72□□□□□ -0.21
ATG4D-203ENST00000585752 WFDC1Q9HC57 220 aa13.72□□□□□ -0.21
ATG4D-203ENST00000585752 hCG_2014768A0A024R1R8 64 aa13.71□□□□□ -0.21
ATG4D-203ENST00000585752 SMLR1H3BR10 107 aa13.71□□□□□ -0.21
ATG4D-203ENST00000585752 FAM78BQ5VT40 261 aa13.71□□□□□ -0.21
ATG4D-203ENST00000585752 MORN3Q6PF18 240 aaPredicted RBP13.71□□□□□ -0.21
ATG4D-203ENST00000585752 SPP1P10451 314 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms