RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 IL18Q14116 193 aa10.14□□□□□ -0.79
SDF2-202ENST00000585428 SPCS2Q15005 226 aa10.14□□□□□ -0.79
SDF2-202ENST00000585428 FCN2Q15485 313 aa10.14□□□□□ -0.79
SDF2-202ENST00000585428 OR1B1Q8NGR6 318 aa10.14□□□□□ -0.79
SDF2-202ENST00000585428 SOSTQ9BQB4 213 aa10.14□□□□□ -0.79
SDF2-202ENST00000585428 ATG101Q9BSB4 218 aa10.14□□□□□ -0.79
SDF2-202ENST00000585428 DUXBA0A1W2PPF3 345 aa10.13□□□□□ -0.79
SDF2-202ENST00000585428 CBY3A6NI87 242 aa10.13□□□□□ -0.79
SDF2-202ENST00000585428 M0R2Z0 102 aa10.13□□□□□ -0.79
SDF2-202ENST00000585428 DEFB130BP0DP73 79 aa10.13□□□□□ -0.79
SDF2-202ENST00000585428 DEFB130AP0DP74 79 aa10.13□□□□□ -0.79
SDF2-202ENST00000585428 SLC25A6P12236 298 aa10.13□□□□□ -0.79
SDF2-202ENST00000585428 ANXA3P12429 323 aa10.13□□□□□ -0.79
SDF2-202ENST00000585428 SPINK13Q1W4C9 94 aa10.13□□□□□ -0.79
SDF2-202ENST00000585428 IGFL4Q6B9Z1 124 aa10.13□□□□□ -0.79
SDF2-202ENST00000585428 GPR141Q7Z602 305 aa10.13□□□□□ -0.79
SDF2-202ENST00000585428 C6orf223Q8N319 242 aa10.13□□□□□ -0.79
SDF2-202ENST00000585428 LRTM2Q8N967 370 aa10.13□□□□□ -0.79
SDF2-202ENST00000585428 GPR82Q96P67 336 aa10.13□□□□□ -0.79
SDF2-202ENST00000585428 SLC25A22Q9H936 323 aa10.13□□□□□ -0.79
SDF2-202ENST00000585428 NACAE9PAV3 2078 aa10.13□□□□□ -0.79
SDF2-202ENST00000585428 PIGBOS1A0A0B4J2F0 54 aa10.12□□□□□ -0.79
SDF2-202ENST00000585428 IAPPP10997 89 aa10.12□□□□□ -0.79
SDF2-202ENST00000585428 ORM2P19652 201 aa10.12□□□□□ -0.79
SDF2-202ENST00000585428 GATA2P23769 480 aaPredicted RBP10.12□□□□□ -0.79
SDF2-202ENST00000585428 LINC00588Q9Y4M8 146 aa10.12□□□□□ -0.79
SDF2-202ENST00000585428 F5H768 121 aa10.11□□□□□ -0.79
SDF2-202ENST00000585428 INSP01308 110 aa10.11□□□□□ -0.79
SDF2-202ENST00000585428 RPP30P78346 268 aaKnown RBP10.11□□□□□ -0.79
SDF2-202ENST00000585428 TMEM128Q5BJH2 165 aa10.11□□□□□ -0.79
SDF2-202ENST00000585428 RNF182Q8N6D2 247 aa10.11□□□□□ -0.79
SDF2-202ENST00000585428 MCUBQ9NWR8 336 aa10.11□□□□□ -0.79
SDF2-202ENST00000585428 RSL24D1Q9UHA3 163 aaKnown RBP10.11□□□□□ -0.79
SDF2-202ENST00000585428 TRAV12-2A0A075B6T6 113 aa10.1□□□□□ -0.79
SDF2-202ENST00000585428 SYNGR2O43760 224 aa10.1□□□□□ -0.79
SDF2-202ENST00000585428 MED6O75586 246 aa10.1□□□□□ -0.79
SDF2-202ENST00000585428 NUDT3O95989 172 aa10.1□□□□□ -0.79
SDF2-202ENST00000585428 ATP5G1P05496 136 aa10.1□□□□□ -0.79
SDF2-202ENST00000585428 ATP5G3P48201 142 aa10.1□□□□□ -0.79
SDF2-202ENST00000585428 CCL18P55774 89 aa10.1□□□□□ -0.79
SDF2-202ENST00000585428 BAP18Q8IXM2 172 aa10.1□□□□□ -0.79
SDF2-202ENST00000585428 MAPKAPK5-AS1Q8N8E1 139 aa10.1□□□□□ -0.79
SDF2-202ENST00000585428 BPIFCQ8NFQ6 507 aa10.1□□□□□ -0.79
SDF2-202ENST00000585428 DYNC2LI1Q8TCX1 351 aa10.1□□□□□ -0.79
SDF2-202ENST00000585428 CIB3Q96Q77 187 aaPredicted RBP10.1□□□□□ -0.79
SDF2-202ENST00000585428 PAIP2BQ9ULR5 123 aaKnown RBP10.1□□□□□ -0.79
SDF2-202ENST00000585428 WRBO00258 174 aa10.09□□□□□ -0.79
SDF2-202ENST00000585428 S100A7P31151 101 aa10.09□□□□□ -0.79
SDF2-202ENST00000585428 TMEM144Q7Z5S9 345 aa10.09□□□□□ -0.79
SDF2-202ENST00000585428 LINC01587Q99440 93 aa10.09□□□□□ -0.79
SDF2-202ENST00000585428 TMEM147Q9BVK8 224 aa10.09□□□□□ -0.79
SDF2-202ENST00000585428 SLC25A39Q9BZJ4 359 aaPredicted RBP10.09□□□□□ -0.79
SDF2-202ENST00000585428 H3BRN7 92 aa10.08□□□□□ -0.8
SDF2-202ENST00000585428 CXCL3P19876 107 aa10.08□□□□□ -0.8
SDF2-202ENST00000585428 TNFSF8P32971 234 aa10.08□□□□□ -0.8
SDF2-202ENST00000585428 TAS2R60P59551 318 aa10.08□□□□□ -0.8
SDF2-202ENST00000585428 PLP1P60201 277 aa10.08□□□□□ -0.8
SDF2-202ENST00000585428 Q8N1X5 172 aa10.08□□□□□ -0.8
SDF2-202ENST00000585428 TMEM256Q8N2U0 113 aa10.08□□□□□ -0.8
SDF2-202ENST00000585428 RNF141Q8WVD5 230 aa10.08□□□□□ -0.8
SDF2-202ENST00000585428 SHANK2-AS3Q9BTD1 123 aa10.08□□□□□ -0.8
SDF2-202ENST00000585428 Q9H8V8 135 aa10.08□□□□□ -0.8
SDF2-202ENST00000585428 TIMM8BQ9Y5J9 83 aaPredicted RBP10.08□□□□□ -0.8
SDF2-202ENST00000585428 FABP12A6NFH5 140 aa10.07□□□□□ -0.8
SDF2-202ENST00000585428 BOLA2-SMG1P6H3BVE0 249 aa10.07□□□□□ -0.8
SDF2-202ENST00000585428 FGL1Q08830 312 aa10.07□□□□□ -0.8
SDF2-202ENST00000585428 SPANXN5Q5MJ07 72 aa10.07□□□□□ -0.8
SDF2-202ENST00000585428 SSX7Q7RTT5 188 aa10.07□□□□□ -0.8
SDF2-202ENST00000585428 ZNF738Q8NE65 137 aa10.07□□□□□ -0.8
SDF2-202ENST00000585428 OR8A1Q8NGG7 326 aa10.07□□□□□ -0.8
SDF2-202ENST00000585428 CCDC59Q9P031 241 aaKnown RBP10.07□□□□□ -0.8
SDF2-202ENST00000585428 LRP1BQ9NZR2 4599 aa10.06□□□□□ -0.8
SDF2-202ENST00000585428 RPL7P18124 248 aaKnown RBP10.06□□□□□ -0.8
SDF2-202ENST00000585428 ID3Q02535 119 aa10.06□□□□□ -0.8
SDF2-202ENST00000585428 PSG3Q16557 428 aa10.06□□□□□ -0.8
SDF2-202ENST00000585428 ZNF493Q6ZR52 646 aa10.06□□□□□ -0.8
SDF2-202ENST00000585428 CYP2G1PQ6ZSU1 146 aa10.06□□□□□ -0.8
SDF2-202ENST00000585428 TMED4Q7Z7H5 227 aa10.06□□□□□ -0.8
SDF2-202ENST00000585428 C16orf74Q96GX8 76 aa10.06□□□□□ -0.8
SDF2-202ENST00000585428 SLIRPQ9GZT3 109 aaKnown RBP10.06□□□□□ -0.8
SDF2-202ENST00000585428 STRAPQ9Y3F4 350 aaKnown RBP10.06□□□□□ -0.8
SDF2-202ENST00000585428 A0A087X0K7 114 aa10.05□□□□□ -0.8
SDF2-202ENST00000585428 PMS2P5A8MQ11 134 aa10.05□□□□□ -0.8
SDF2-202ENST00000585428 HYPMO75409 117 aa10.05□□□□□ -0.8
SDF2-202ENST00000585428 SFT2D2O95562 160 aa10.05□□□□□ -0.8
SDF2-202ENST00000585428 IL5P05113 134 aa10.05□□□□□ -0.8
SDF2-202ENST00000585428 HTN1P15515 57 aa10.05□□□□□ -0.8
SDF2-202ENST00000585428 TMBIM6P55061 237 aa10.05□□□□□ -0.8
SDF2-202ENST00000585428 RHOBP62745 196 aa10.05□□□□□ -0.8
SDF2-202ENST00000585428 HIST1H1AQ02539 215 aaPredicted RBP10.05□□□□□ -0.8
SDF2-202ENST00000585428 AKR1C1Q04828 323 aa10.05□□□□□ -0.8
SDF2-202ENST00000585428 ACOT7LQ6ZUV0 252 aa10.05□□□□□ -0.8
SDF2-202ENST00000585428 RNASE8Q8TDE3 154 aaKnown RBP10.05□□□□□ -0.8
SDF2-202ENST00000585428 RAB2BQ8WUD1 216 aa10.05□□□□□ -0.8
SDF2-202ENST00000585428 SLC25A21Q9BQT8 299 aaPredicted RBP10.05□□□□□ -0.8
SDF2-202ENST00000585428 MRPS26Q9BYN8 205 aaKnown RBP10.05□□□□□ -0.8
SDF2-202ENST00000585428 NOP10Q9NPE3 64 aaKnown RBP10.05□□□□□ -0.8
SDF2-202ENST00000585428 HIGD1AQ9Y241 93 aa10.05□□□□□ -0.8
SDF2-202ENST00000585428 MRPS12O15235 138 aaKnown RBP10.04□□□□□ -0.8
SDF2-202ENST00000585428 HOXB5P09067 269 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms